Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10f05
         (405 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U67953-6|ABA00176.1|  287|Caenorhabditis elegans Hypothetical pr...    32   0.18 
AL117195-12|CAB60765.1|  425|Caenorhabditis elegans Hypothetical...    29   0.96 
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ...    29   0.96 
AF078788-4|AAC26961.1|  342|Caenorhabditis elegans Hypothetical ...    28   2.2  
U64845-4|AAC48029.1|  623|Caenorhabditis elegans Hypothetical pr...    28   2.9  
AC024817-39|AAP68916.1|  128|Caenorhabditis elegans Hypothetical...    27   3.9  
U23455-2|AAC46534.1|  423|Caenorhabditis elegans Hypothetical pr...    27   6.8  
AC024830-1|AAF59605.1|  256|Caenorhabditis elegans Hypothetical ...    27   6.8  
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr...    26   9.0  
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr...    26   9.0  
Z70783-3|CAA94853.4|  755|Caenorhabditis elegans Hypothetical pr...    26   9.0  
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.      26   9.0  

>U67953-6|ABA00176.1|  287|Caenorhabditis elegans Hypothetical
           protein ZC13.10 protein.
          Length = 287

 Score = 31.9 bits (69), Expect = 0.18
 Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
 Frame = -1

Query: 387 NQFIATNFNTNVLHRNTDNL-QICCDH*QYPCLLRSESRRRSTQPRLKPSHTLKSRIKQH 211
           N    T  N+N ++RN+++  Q          +   ES+ R     L P H +  R    
Sbjct: 22  NYLSLTTNNSNYINRNSESSPQYTGTRNSSLSINYPESKERCNNDLLIPCHLMPPRDPYA 81

Query: 210 IPTSTEPYWRSIHCSPVEQSQALWSISLSVFRCC 109
              ST   W SI  S +  S+  +    S  +CC
Sbjct: 82  SRLSTSSAWSSIRLSVLSLSRVFFLKPCSKHKCC 115


>AL117195-12|CAB60765.1|  425|Caenorhabditis elegans Hypothetical
           protein Y57A10A.19 protein.
          Length = 425

 Score = 29.5 bits (63), Expect = 0.96
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = -1

Query: 285 SESRRRSTQPRLKPSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQALWSISLS 124
           SE+ RRST    K S   +  +KQ  P+ +E Y    + +P+   ++   +  S
Sbjct: 341 SENERRSTATASKKSRMDELEVKQEPPSDSEDYIAKTNLAPIRVEKSAEKVEKS 394


>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
            protein Y53C10A.9 protein.
          Length = 1564

 Score = 29.5 bits (63), Expect = 0.96
 Identities = 17/65 (26%), Positives = 31/65 (47%)
 Frame = +3

Query: 153  FVQQDYNEWNANTALWMLVYAVLFWILTYVMVLTVAVCFDVGFRSVTSMGIVNGHNRSVN 332
            F  Q Y    +  A W +V+   F + T+ ++ T      +GF  + S G++ GH   + 
Sbjct: 1020 FAHQQYLTGLSTIAYWGVVFLWDFLLFTFFLLYT------IGF--LISFGVLQGHIHEIV 1071

Query: 333  YLYYG 347
             ++YG
Sbjct: 1072 VIFYG 1076


>AF078788-4|AAC26961.1|  342|Caenorhabditis elegans Hypothetical
           protein ZC190.2 protein.
          Length = 342

 Score = 28.3 bits (60), Expect = 2.2
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +3

Query: 222 FWILTYVMVLTVAVCFDVGFRSVTSMGIVNGHNRSVNYLYYGAKHLY*N 368
           F  +  V +   +  F +GF S+T M I+NG    V  L+Y AK +Y N
Sbjct: 152 FLYIYLVRISYDSTLFAIGFGSLTMMEILNG--CIVFSLFYTAKEIYQN 198


>U64845-4|AAC48029.1|  623|Caenorhabditis elegans Hypothetical
           protein F45F2.7 protein.
          Length = 623

 Score = 27.9 bits (59), Expect = 2.9
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +3

Query: 135 CSIELGFVQQDYNEWNANTALWMLVY--AVLFWILTYVMVL 251
           C I +       + W A T   +L+Y  A+LF++ TY+M++
Sbjct: 79  CLISISSAWSSPDLWLAETIFSLLMYLIAILFFMYTYLMII 119


>AC024817-39|AAP68916.1|  128|Caenorhabditis elegans Hypothetical
           protein Y54G2A.36 protein.
          Length = 128

 Score = 27.5 bits (58), Expect = 3.9
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 233 NVCDGFNRGCVLRRRLSLRNKHGYCQWSQQICK 331
           + C GFNR     +  S R+ H   QWS++ C+
Sbjct: 63  SACGGFNRCLHQEQSHSDRSPHFILQWSRRQCR 95


>U23455-2|AAC46534.1|  423|Caenorhabditis elegans Hypothetical
           protein F55E10.5 protein.
          Length = 423

 Score = 26.6 bits (56), Expect = 6.8
 Identities = 21/87 (24%), Positives = 37/87 (42%)
 Frame = +3

Query: 18  FDLMK*NLTYLIYLATQNIAAMTSYTPEDMNNIETPKEKCSIELGFVQQDYNEWNANTAL 197
           FD++   LTY   +    +     YT + MN   T      + L   +    +       
Sbjct: 40  FDILSEFLTYKYVVNAITLNLTIKYTSQKMNETHT-DSIIDVTLAIEETSQKQHQ----- 93

Query: 198 WMLVYAVLFWILTYVMVLTVAVCFDVG 278
            M+  AVL++IL  ++V+ +  C D+G
Sbjct: 94  -MITVAVLWFILAILLVMVIFAC-DLG 118


>AC024830-1|AAF59605.1|  256|Caenorhabditis elegans Hypothetical
           protein Y55F3BR.5 protein.
          Length = 256

 Score = 26.6 bits (56), Expect = 6.8
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 369 NFNTNVLHRNTDNLQICC 316
           NF+ N++H   D ++ICC
Sbjct: 79  NFDGNLVHATFDKIEICC 96


>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical
           protein K04G2.8b protein.
          Length = 1188

 Score = 26.2 bits (55), Expect = 9.0
 Identities = 13/49 (26%), Positives = 23/49 (46%)
 Frame = -1

Query: 291 LRSESRRRSTQPRLKPSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQA 145
           ++SE    S+ P++K S  L         T++ P W     SP+ +S +
Sbjct: 777 IQSEMPTSSSTPKMKVSPRLNGFFSPTQKTTSSPAWSHPDTSPIPKSSS 825


>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical
           protein K04G2.8a protein.
          Length = 1186

 Score = 26.2 bits (55), Expect = 9.0
 Identities = 13/49 (26%), Positives = 23/49 (46%)
 Frame = -1

Query: 291 LRSESRRRSTQPRLKPSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQA 145
           ++SE    S+ P++K S  L         T++ P W     SP+ +S +
Sbjct: 775 IQSEMPTSSSTPKMKVSPRLNGFFSPTQKTTSSPAWSHPDTSPIPKSSS 823


>Z70783-3|CAA94853.4|  755|Caenorhabditis elegans Hypothetical
           protein ZK856.5 protein.
          Length = 755

 Score = 26.2 bits (55), Expect = 9.0
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -2

Query: 218 NSIYQHPQSRIGVPFIVVLLNKAKLYGAFLFRCFDV 111
           NS YQHP+ +   P   +L+N     G   F   DV
Sbjct: 482 NSTYQHPKKKEKSPKNAILINLKNTLGGEKFTVEDV 517


>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
          Length = 1186

 Score = 26.2 bits (55), Expect = 9.0
 Identities = 13/49 (26%), Positives = 23/49 (46%)
 Frame = -1

Query: 291 LRSESRRRSTQPRLKPSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQA 145
           ++SE    S+ P++K S  L         T++ P W     SP+ +S +
Sbjct: 775 IQSEMPTSSSTPKMKVSPRLNGFFSPTQKTTSSPAWSHPDTSPIPKSSS 823


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,923,267
Number of Sequences: 27780
Number of extensions: 211625
Number of successful extensions: 736
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)