Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10f04
         (721 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0289 - 14725832-14726114,14726216-14726298,14726432-147265...    31   1.2  
07_01_0396 + 3016900-3017175,3017926-3018039,3018138-3018350,301...    30   1.6  
03_02_0797 - 11296426-11297258,11297745-11297901                       30   2.1  
04_03_0799 - 19805190-19805749,19806316-19806403                       28   6.5  
03_04_0059 - 16925226-16925480,16926344-16926397,16927184-16927216     28   6.5  
05_07_0033 + 27197654-27198196,27198297-27198359,27198844-271989...    28   8.6  
05_01_0165 - 1139271-1139417,1139549-1139777,1139889-1139992,114...    28   8.6  
01_06_0311 - 28377414-28377623,28377758-28377856,28378116-283782...    28   8.6  

>01_03_0289 -
           14725832-14726114,14726216-14726298,14726432-14726545,
           14727830-14728199,14728726-14728856,14728970-14729078,
           14729257-14729378,14729522-14729625,14729849-14729953,
           14730034-14730192,14730336-14730391,14730576-14730627,
           14730725-14731031
          Length = 664

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
 Frame = -3

Query: 584 GAVFGLQCAA-----GAPLSSMAALAEHYVTHVRTVRPHQPYLLLGYSFGAAVAFEMA 426
           G +F L+C         P   +  + E  V       P++P  LLG SFG  +A  +A
Sbjct: 119 GRIFELRCMHIPFHDRTPFEELVEMVEDVVRAEHATSPNKPIYLLGTSFGGCIALAVA 176


>07_01_0396 +
           3016900-3017175,3017926-3018039,3018138-3018350,
           3019216-3019392,3019511-3021332,3021348-3022168,
           3022311-3022631
          Length = 1247

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
 Frame = -3

Query: 626 GVVDLLRGVASEVAGAVFGLQCAAGAPL-SSMAALAEHYVTHVRTVRPHQPYLLLGYSFG 450
           G +DL + VA+  AG+ FGL     A L + MA L ++    + TV       + G + G
Sbjct: 40  GYIDLGKWVAAVEAGSRFGLDLVLLALLFNFMAILCQYLAACIGTVTGRSLAEIFGIALG 99

Query: 449 AAVAFEM-ALHLGACISSSI 393
             + FE   L  G C ++ +
Sbjct: 100 FNLLFEYDDLITGICFATVV 119


>03_02_0797 - 11296426-11297258,11297745-11297901
          Length = 329

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +1

Query: 517 CSASAAMEDSGAPAAHCSPNTAPATSLATPRSRSTTPS 630
           C+A+   +  G PA   S  TA ++SL+T       PS
Sbjct: 201 CAAAGGAQSGGTPAPELSSTTAGSSSLSTDSGAGAQPS 238


>04_03_0799 - 19805190-19805749,19806316-19806403
          Length = 215

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 17/56 (30%), Positives = 21/56 (37%)
 Frame = +1

Query: 421 CSAISKATAAPKEYPSSR*GWWGRTVRTCVT*CSASAAMEDSGAPAAHCSPNTAPA 588
           C A  K    P E      G  G   +  V+ C    ++ D GA  A C P   PA
Sbjct: 126 CPAPPKPKPKPCECTHHCGGHGGGCNKPAVSPCGGGCSISDGGACGASCKPPPPPA 181


>03_04_0059 -
          16925226-16925480,16926344-16926397,16927184-16927216
          Length = 113

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 8/14 (57%), Positives = 14/14 (100%)
 Frame = +3

Query: 9  INVHCYNHTCTQLT 50
          +++HCYN++CT+LT
Sbjct: 52 LSLHCYNNSCTKLT 65


>05_07_0033 +
           27197654-27198196,27198297-27198359,27198844-27198993,
           27199079-27199150
          Length = 275

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 18/43 (41%), Positives = 22/43 (51%)
 Frame = +1

Query: 520 SASAAMEDSGAPAAHCSPNTAPATSLATPRSRSTTPSIGCTYG 648
           SASAA  D     A  SP+ AP    AT R+R  + S   T+G
Sbjct: 4   SASAAASDHHTAQAKSSPSAAPPAGSAT-RTRLHSFSFPTTFG 45


>05_01_0165 -
           1139271-1139417,1139549-1139777,1139889-1139992,
           1140097-1140639
          Length = 340

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 23/84 (27%), Positives = 35/84 (41%)
 Frame = -3

Query: 599 ASEVAGAVFGLQCAAGAPLSSMAALAEHYVTHVRTVRPHQPYLLLGYSFGAAVAFEMALH 420
           A+    A      A+   L +   +A  Y +++  +  ++ +LL  Y F   V F  A H
Sbjct: 21  AAAADAAAASSPAASAGRLFTAGLVASWYASNIGVLLLNK-FLLSTYGFRYPV-FLTACH 78

Query: 419 LGACISSSIMYARAHCVQRRRARP 348
           + AC   S   A A     R ARP
Sbjct: 79  MSACALLSYAAAAASAAAPRAARP 102


>01_06_0311 -
           28377414-28377623,28377758-28377856,28378116-28378253,
           28378697-28378827,28378920-28379066,28379164-28379293,
           28379625-28379654,28380138-28380416
          Length = 387

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
 Frame = -3

Query: 575 FGLQCAAGAPLSSMAALAEHYVTHVRTVRPHQ-----PYLLLGYSFGAAVAFEMAL 423
           FGL       ++S   + EH +     ++  +     P+ LLG S G AVA ++ L
Sbjct: 167 FGLSYGLHGYIASFDGMVEHVIEQYSRIKGRKEVRGLPHFLLGQSMGGAVALKVHL 222


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,805,073
Number of Sequences: 37544
Number of extensions: 182466
Number of successful extensions: 954
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)