Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10f04
(721 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20108| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_55804| Best HMM Match : Acyl_transf_1 (HMM E-Value=1.2e-07) 50 2e-06
SB_14655| Best HMM Match : Ketoacyl-synt_C (HMM E-Value=0) 49 4e-06
SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_18285| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_35576| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_51866| Best HMM Match : Pkinase (HMM E-Value=0) 29 3.8
SB_54954| Best HMM Match : zf-RanBP (HMM E-Value=2.1) 28 6.6
SB_47880| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_44302| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_42153| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_8748| Best HMM Match : Astacin (HMM E-Value=0) 28 6.6
SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
>SB_20108| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/43 (55%), Positives = 28/43 (65%)
Frame = -3
Query: 554 GAPLSSMAALAEHYVTHVRTVRPHQPYLLLGYSFGAAVAFEMA 426
GA SS+ LA HYV+ VR + H PY L GY FG VA+EMA
Sbjct: 188 GADCSSVRELASHYVSLVREEQKHGPYFLGGYCFGGLVAYEMA 230
>SB_55804| Best HMM Match : Acyl_transf_1 (HMM E-Value=1.2e-07)
Length = 1306
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/43 (55%), Positives = 28/43 (65%)
Frame = -3
Query: 554 GAPLSSMAALAEHYVTHVRTVRPHQPYLLLGYSFGAAVAFEMA 426
GA SS+ LA HYV+ VR + H PY L GY FG VA+EMA
Sbjct: 957 GADCSSVRELASHYVSLVREEQKHGPYFLGGYCFGGLVAYEMA 999
>SB_14655| Best HMM Match : Ketoacyl-synt_C (HMM E-Value=0)
Length = 2232
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/39 (56%), Positives = 26/39 (66%)
Frame = -3
Query: 542 SSMAALAEHYVTHVRTVRPHQPYLLLGYSFGAAVAFEMA 426
SS+ LA HYV +R + H PY + GYSFG VAFEMA
Sbjct: 1965 SSVRELATHYVALMRNEQKHGPYFICGYSFGGLVAFEMA 2003
>SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4482
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = -3
Query: 539 SMAALAEHYVTHVRTVRPHQPYLLLGYSFGAAVAFEMA 426
S+ LA Y VR + H PY L GYSFG VA+EMA
Sbjct: 3114 SVRQLAMEYTHLVREEQRHGPYFLGGYSFGGLVAYEMA 3151
>SB_18285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1094
Score = 31.9 bits (69), Expect = 0.54
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 378 STCIHYTAGYTRTEVQRHLEGHGGAEGVSQQQVGLVGAHGA 500
ST +H AGY EV +L H GA+ +Q + GL+ H A
Sbjct: 622 STPLHLAAGYNHLEVAEYLLEH-GADVNAQDKGGLIPLHNA 661
>SB_35576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1315
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +1
Query: 529 AAMEDSGAPAAHCSPNTAPATSLATPRSRSTTPSIGCT 642
A S P A T PA TP S TTPS G T
Sbjct: 241 APENSSTKPGAESGGETTPAPGATTPPSEETTPSAGGT 278
>SB_51866| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 948
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Frame = +1
Query: 415 PRCSAISKATAAPKEYPSSR*GWWGRTVRTCVT*CSASAAMEDSGAPAAHCS-------- 570
P S +S + AAP+ +S W + ++C+T + + +E G PA S
Sbjct: 631 PHISVVSSSLAAPEIQAASVAYSWPSSTKSCLTLRAKALPLEARGVPAQQQSDIFLSATD 690
Query: 571 PNTAPATSLATPR-SRSTTPSIGCTY 645
N + AT R + + TP+IG ++
Sbjct: 691 SNFTTSADCATTRVTFNGTPTIGSSF 716
>SB_54954| Best HMM Match : zf-RanBP (HMM E-Value=2.1)
Length = 172
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 526 SAAMEDSGAPAAHCSPNTAP-ATSLATPRSRSTTPSIG 636
+A +GAPAA P AP AT+ T +TTP G
Sbjct: 117 AATTPPTGAPAATTPPTAAPAATTPPTAAPAATTPPTG 154
>SB_47880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 526 SAAMEDSGAPAAHCSPNTAP-ATSLATPRSRSTTPSIG 636
+A +GAPAA P AP AT+ T +TTP G
Sbjct: 184 AATTPPTGAPAATTPPTAAPAATTPPTAAPAATTPPTG 221
>SB_44302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 526 SAAMEDSGAPAAHCSPNTAP-ATSLATPRSRSTTPSIG 636
+A +GAPAA P AP AT+ T +TTP G
Sbjct: 7 AATTPPTGAPAATTPPTAAPAATTPPTAAPAATTPPTG 44
>SB_42153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 526 SAAMEDSGAPAAHCSPNTAP-ATSLATPRSRSTTPSIG 636
+A +GAPAA P AP AT+ T +TTP G
Sbjct: 70 AATTPPTGAPAATTPPTAAPAATTPPTAAPAATTPPTG 107
>SB_8748| Best HMM Match : Astacin (HMM E-Value=0)
Length = 757
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +1
Query: 424 SAISKATAAPKEYPSSR*GWWGRTVRTCVT*CSASAAMEDSGAPAAHCSPNTAPATSLAT 603
SA + AP PS+ T T T + ++ S APA+ P+ APA+ T
Sbjct: 516 SAPAGLNQAPTSSPSASTNPTPTTAETAGTSGAPTSVPPASSAPASGAPPSGAPASGATT 575
Query: 604 P 606
P
Sbjct: 576 P 576
>SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2670
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 553 PAAHCSPNTAPATSLATPRSRSTTP 627
P++H SP +AP +S TP S + P
Sbjct: 927 PSSHQSPQSAPPSSPCTPSSSTAPP 951
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,707,455
Number of Sequences: 59808
Number of extensions: 203669
Number of successful extensions: 824
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1913853903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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