Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10f04
(721 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z68750-6|CAA92970.1| 1035|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z68750-5|CAA92969.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z68300-4|CAA92619.1| 1035|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z68300-3|CAA92618.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 4.4
AC006730-11|ABO16462.1| 327|Caenorhabditis elegans Hypothetical... 28 5.8
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 7.7
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 28 7.7
>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
F32H2.5 protein.
Length = 2586
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/72 (34%), Positives = 42/72 (58%)
Frame = -3
Query: 641 VHPIEGVVDLLRGVASEVAGAVFGLQCAAGAPLSSMAALAEHYVTHVRTVRPHQPYLLLG 462
VH IEG+ L+ V ++ + Q P +S+ +A+ Y+ ++ ++P PY L+G
Sbjct: 2327 VHSIEGIATPLKKVMNKCEFPAYCFQSTKNVPQTSIEDVAKCYIREMKKIQPSGPYRLVG 2386
Query: 461 YSFGAAVAFEMA 426
YS+GA + FEMA
Sbjct: 2387 YSYGACIGFEMA 2398
>Z68750-6|CAA92970.1| 1035|Caenorhabditis elegans Hypothetical
protein T22B3.2b protein.
Length = 1035
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +3
Query: 438 GHGGAEGVSQQQVGLVGAHGAHVRD 512
G GGA G S Q G G GA+VRD
Sbjct: 341 GRGGARGGSYQNFGNRGPPGANVRD 365
>Z68750-5|CAA92969.1| 1032|Caenorhabditis elegans Hypothetical
protein T22B3.2a protein.
Length = 1032
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +3
Query: 438 GHGGAEGVSQQQVGLVGAHGAHVRD 512
G GGA G S Q G G GA+VRD
Sbjct: 338 GRGGARGGSYQNFGNRGPPGANVRD 362
>Z68300-4|CAA92619.1| 1035|Caenorhabditis elegans Hypothetical
protein T22B3.2b protein.
Length = 1035
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +3
Query: 438 GHGGAEGVSQQQVGLVGAHGAHVRD 512
G GGA G S Q G G GA+VRD
Sbjct: 341 GRGGARGGSYQNFGNRGPPGANVRD 365
>Z68300-3|CAA92618.1| 1032|Caenorhabditis elegans Hypothetical
protein T22B3.2a protein.
Length = 1032
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +3
Query: 438 GHGGAEGVSQQQVGLVGAHGAHVRD 512
G GGA G S Q G G GA+VRD
Sbjct: 338 GRGGARGGSYQNFGNRGPPGANVRD 362
>AC006730-11|ABO16462.1| 327|Caenorhabditis elegans Hypothetical
protein Y27F2A.11 protein.
Length = 327
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 473 LLLGYSFGAAVAFEMALHLG-ACISSSIMY 387
LL GY+ G V + +LH+G ACI+ + Y
Sbjct: 91 LLAGYNMGIGVRYGASLHVGIACITFLLCY 120
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +1
Query: 505 CVT*CSASAAMEDSGAPAAHCSPNTAPATSLATPRSRSTTPS 630
C T + + + + P + T P T+ TP + +TTP+
Sbjct: 62 CTTTSTTTTSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPT 103
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 502 TCVT*CSASAAMEDSGAPAAHCSPNTAPATSLATPRSRSTT 624
T +T +AS + + SP+T+P TS T S S+T
Sbjct: 430 TTLTTSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSST 470
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 502 TCVT*CSASAAMEDSGAPAAHCSPNTAPATSLATPRSRSTT 624
T +T +AS + + SP+T+P TS T S S+T
Sbjct: 430 TTLTTSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSST 470
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 27.9 bits (59), Expect = 7.7
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 493 TVRTCVT*CSASAAMEDSGAPAAHCSPNTA-PATSLATPRSRSTTPSIGCTYGRKYT 660
T T T +A + AP A P TA PAT TPR+ STT I T +++T
Sbjct: 294 TTTTTTTTTTALPPCVYTPAPPATAPPATATPATQ--TPRTYSTTTPIKTTVPQQWT 348
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,021,684
Number of Sequences: 27780
Number of extensions: 151297
Number of successful extensions: 670
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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