Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10f03
         (661 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_1045 - 22535516-22535593,22535681-22535756,22535843-225359...    32   0.47 
04_04_1218 - 31822915-31823141,31823418-31823832,31824090-318244...    31   0.81 
10_06_0151 + 11276554-11276916,11277020-11277403                       29   3.3  
10_07_0130 + 13241085-13241151,13241268-13241339,13242458-132428...    28   5.7  
03_02_0403 + 8160664-8163690                                           28   5.7  
02_05_0849 + 32202610-32202880,32204234-32205711,32205993-322061...    28   5.7  

>10_08_1045 -
           22535516-22535593,22535681-22535756,22535843-22535946,
           22536048-22536176,22536539-22536700,22537029-22537259,
           22537345-22537428,22537515-22537583,22537671-22537739,
           22537827-22537889,22537913-22538052,22538527-22539097
          Length = 591

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 16/82 (19%), Positives = 43/82 (52%)
 Frame = +3

Query: 21  MWVKTIFAYLCVFETILLNTSIFCYATNANKSIGDENREDIAETNEDSKEASLEIPTENF 200
           +W+  ++ +      I+ + ++    + +++   D+N +DI   +E+SK++   IPT+  
Sbjct: 223 LWISMMYEHYFGPANIVDDITLAIECSKSSQIQKDKNVQDITRDSEESKQSESCIPTDKD 282

Query: 201 LNNLTACTRRENTLMHEIRTAK 266
           + ++T+ +++       I T K
Sbjct: 283 VQDITSDSKKSKQSESCIHTDK 304


>04_04_1218 - 31822915-31823141,31823418-31823832,31824090-31824440,
            31825391-31825549,31825965-31826093,31826257-31826460,
            31827200-31827412,31827547-31830912,31830999-31831150,
            31831912-31832407,31832646-31833456,31833537-31834728,
            31834856-31834922
          Length = 2593

 Score = 31.1 bits (67), Expect = 0.81
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = +3

Query: 240  LMHEIRTAKPSEFPFMVAIMSPQNQFLCSGVVVSNGMILTSARCSQQAIDHVLLNTTNDK 419
            L+H ++T  PS  PF+ +++  Q+ +L         M  +S R  +  +D   +N   DK
Sbjct: 1022 LLHVLKTHFPSNLPFLSSVLFLQHDYLAKVASYCPDMFFSSLRQIKGNLDVDSVNIVEDK 1081


>10_06_0151 + 11276554-11276916,11277020-11277403
          Length = 248

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = -3

Query: 341 RNYDTRTQKLILRRHNSHHKRKLTGFGCTNFVH*SIFSSSASCEVV*KIFCRNFQRRL 168
           + +D    + IL   N   K KLT  G  NF+   ++S+S    V+  +F  N++ RL
Sbjct: 104 KQFDFNKSQNILLTLNEEEKEKLTLSGLLNFID-GLWSTSGEERVI--VFTTNYRERL 158


>10_07_0130 +
           13241085-13241151,13241268-13241339,13242458-13242862,
           13243057-13243112,13244116-13244274,13244379-13244498,
           13244591-13245361,13245902-13246078,13246192-13246669,
           13247502-13248094
          Length = 965

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
 Frame = +3

Query: 51  CVFETILLNTSIFCYA----TNANKSIGDENREDIAETNEDSKEASL 179
           C+  T+  +  IF Y     TN+  SI D    ++A  N D K+A L
Sbjct: 200 CLITTVESSLRIFAYLAFADTNSVSSITDVTSNEVAICNNDGKDAKL 246


>03_02_0403 + 8160664-8163690
          Length = 1008

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +3

Query: 447 VKKIEK-FPTYDGGEIHKDVALIYTEKYNNTVVSKIKLGNYTDKKS 581
           ++K+EK  P +DG    K    ++ E+Y  T+  K++   Y D +S
Sbjct: 529 IRKVEKPDPYFDGVVTTKTTLPVFLEQYETTLRGKLEREAYDDLRS 574


>02_05_0849 +
           32202610-32202880,32204234-32205711,32205993-32206143,
           32206378-32206559
          Length = 693

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
 Frame = +3

Query: 450 KKIEKFPTYDGGEI------HKDVALIYTEKYNNTVVSKIKLGNYTDKKSITDFEAFGY 608
           KK  + PT DG  +      H++      +K+N   +++I L + TD    + F  FGY
Sbjct: 455 KKYSEHPTVDGTRVEVYQPSHEEYQRSKNKKHNMKALAEIYLLSMTDVLITSGFSTFGY 513


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,425,101
Number of Sequences: 37544
Number of extensions: 285791
Number of successful extensions: 690
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)