Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10f03
(661 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.039
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.12
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 34 0.12
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.21
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.48
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.83
SB_17803| Best HMM Match : SRCR (HMM E-Value=0) 31 0.83
SB_51089| Best HMM Match : I-set (HMM E-Value=1.4e-38) 31 0.83
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_46577| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_38508| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_6854| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_50329| Best HMM Match : 7tm_1 (HMM E-Value=0) 30 1.9
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.4
SB_53814| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_48530| Best HMM Match : HALZ (HMM E-Value=3.8) 28 5.9
SB_30962| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 28 5.9
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 28 7.7
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 44.4 bits (100), Expect = 8e-05
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Frame = +3
Query: 255 RTAKPSEFPFMVAIMSPQNQFLCSGVVVSNGMILTSARC----SQQAIDHVLLNTTN-DK 419
+ A P +P+ +A+ S N F+C G +VS+ ++T+A C S A +++ N +
Sbjct: 481 KDAIPGAWPWQIALKSRGN-FICGGSLVSSTWVVTAAHCVARSSNPAQYQIIVGEHNRNV 539
Query: 420 NKDSCIALRVKKIEKFPTYDGGEIHKDVALI 512
N+ + L VKK+ P Y+ + D+ALI
Sbjct: 540 NEVTEETLNVKKVIAHPQYNNPRLSNDIALI 570
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 35.5 bits (78), Expect = 0.039
Identities = 19/91 (20%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Frame = +3
Query: 255 RTAKPSEFPFMVAIMSPQNQFLCSGVVVSNGMILTSARC---SQQAIDHVLLNTTNDKNK 425
+ A+P +P+ +++ C G ++S+ ++T+A C ++ + ++ + K
Sbjct: 110 QNAQPHSWPWQISLRGRSGFHTCGGSLISDRWVVTAAHCIHRNKNPGGYTVVVGAHKKRG 169
Query: 426 DSCI--ALRVKKIEKFPTYDGGEIHKDVALI 512
+ + +LR+ +I + P Y+ I D+AL+
Sbjct: 170 STSVQQSLRLSQIIEHPKYNDRRIVNDIALL 200
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Frame = +3
Query: 270 SEFPFMVAIMSPQNQFLCSGVVVSNGMILTSARC---SQQAIDHVLLNTTNDKNKDSCIA 440
S + F + F+C G +VS ++T+A C S + ++ + +N
Sbjct: 76 SRYFFFQIALERSGSFICGGSLVSPTWVVTAAHCIAGSSHTPSYKVVTGEHIRNSPEGTE 135
Query: 441 LR--VKKIEKFPTYDGGEIHKDVALI 512
VK+I PTY+ ++ D+ALI
Sbjct: 136 QTHDVKRIITHPTYNSPQLSNDIALI 161
Score = 30.7 bits (66), Expect = 1.1
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 6/138 (4%)
Frame = +3
Query: 117 IGDENREDIAETNEDSKEASLEIPTENFLNNLTACTRRENTLMHEIRTAKPSEFPFMVAI 296
+G + DIA + K + P + +C R +T + AK ++P+ +
Sbjct: 622 VGYSYQGDIAIDDVTIKSCATRPPFPTTQAPVASCGVRPSTRIVGGTAAKQGDWPWQAQL 681
Query: 297 MSPQNQFLCSGVVVSNGMILTSARC--SQQAID-HVLLNTTNDK-NKDSCIALRVKKIEK 464
S C G ++ +LT+ C S++ D ++ L N + N ++V+KI
Sbjct: 682 RSTSGFPFCGGSLIHPQWVLTATHCVSSRRPTDLNIRLGAHNRRANLGMEQDIKVEKIIM 741
Query: 465 FPTY--DGGEIHKDVALI 512
P Y G H D+ALI
Sbjct: 742 HPGYRKPVGLAH-DIALI 758
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3
Query: 141 IAETNEDSKEASLEIPTENFLNNLTACTRREN-TLMHEIRTAKPSEFPFMVAIMSPQNQF 317
+A TN +S L + LN L C RR + + A+P +P+ V++ S
Sbjct: 442 LAITNANSVNIPLPTIRQRLLNFLADCGRRPPMSRVIGGEAARPYSWPWQVSV-SMGKLH 500
Query: 318 LCSGVVVSNGMILTSARC 371
C G ++S+ ++T+A C
Sbjct: 501 SCGGALISSKWVITAAHC 518
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 33.5 bits (73), Expect = 0.16
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +3
Query: 258 TAKPSEFPFMVAIMSPQNQFLCSGVVVSNGMILTSARC---SQQAIDHVLLNTTNDKNKD 428
TA P +P+ V ++ + C G +V+ ++T+A C A V L + + D
Sbjct: 636 TAPPGAWPWQVMLIYNSGRQFCGGTLVTPEWVITAAHCVVDKNPASIQVRLGAQDRTSPD 695
Query: 429 SCIALR--VKKIEKFPTYDGGE-IHKDVALI 512
+ +R ++ I P Y + D+AL+
Sbjct: 696 PSVEMRISIRSIHNHPDYGSPKRSSNDIALL 726
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 33.1 bits (72), Expect = 0.21
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 6/122 (4%)
Frame = +3
Query: 48 LCVFETILLNTSIFCYATNANKSIGDEN-REDIAETNEDSKEASLEIPTENFLNNLT--- 215
L +F +N I+C+ + + + E R A N E L + + ++
Sbjct: 281 LMIFTQAAVNPVIYCFYSKQFRGVFKELLRCRWAAVNRKKTEQPLRSRSPYLVFCISVRL 340
Query: 216 --ACTRRENTLMHEIRTAKPSEFPFMVAIMSPQNQFLCSGVVVSNGMILTSARCSQQAID 389
+C R T + A+P+ +P+MV I + N C G +VS ++T+A C +D
Sbjct: 341 ALSCGYRYGTRIISGSDAQPNSWPWMVQI-NYNNGHHCGGTLVSPQWVVTAAHC----VD 395
Query: 390 HV 395
HV
Sbjct: 396 HV 397
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 31.9 bits (69), Expect = 0.48
Identities = 37/136 (27%), Positives = 56/136 (41%), Gaps = 10/136 (7%)
Frame = +3
Query: 207 NLTACTRRENTLMHEIRTAKP--SEFPFMVAIMSPQNQFLCSGVVVSNGMILTSARC--S 374
NL C R E I ++ E+P+ + F+C G +V+ G +LT+A C S
Sbjct: 18 NLETCGRAEVPATRVISGSEALLGEWPWQAWLHLQHTGFICGGSLVAPGWVLTAAHCILS 77
Query: 375 QQAIDH--VLLNTTNDKNKDSCIALRVKKIEKFPTYDGGEI--HKDVALIYTEKY--NNT 536
A + VL + K + S + V + K Y G + DVAL+ Y
Sbjct: 78 DDASKYKVVLGDVDRKKIEGSEQMIDVAMVIKHYAY-GNPVPNANDVALLKLRDYPTKTD 136
Query: 537 VVSKIKLGNYTDKKSI 584
V+ + L Y D I
Sbjct: 137 FVNTVCLPQYMDHVEI 152
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 31.1 bits (67), Expect = 0.83
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Frame = +3
Query: 255 RTAKPSEFPFMVAIMSP-QNQFLCSGVVVSNGMILTSARCSQQAIDHVLLNTTNDKNKDS 431
+TAK ++P+ + + +C G +++ ++T+A C ID N+ ++
Sbjct: 437 QTAKVEDWPWQAGLKKGLDDTIVCGGSLINREWVVTAAHC----IDR------NNPSRTG 486
Query: 432 CIA----LRVKKIEKFPT-YDGGEIHKDVALI 512
C+ +RV E T ++G EIH+DVA I
Sbjct: 487 CVVPDPPIRVILGESDVTKHEGNEIHRDVAQI 518
>SB_17803| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1428
Score = 31.1 bits (67), Expect = 0.83
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +3
Query: 267 PSEFPFMVAIMSPQNQFLCSGVVVSNGMILTSARCSQQAI 386
P ++P+ I++ + CSGV++S ++T+A C + I
Sbjct: 1096 PEDWPWQTMILNRRRFPFCSGVLISARHVITAAHCFDRII 1135
>SB_51089| Best HMM Match : I-set (HMM E-Value=1.4e-38)
Length = 1334
Score = 31.1 bits (67), Expect = 0.83
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Frame = +3
Query: 354 LTSARCSQQAIDHVLLNTTNDKNKDS--CIALRVKKIEKFPTYDGGEIHKDVALIYTEKY 527
LTS C Q +H+ L +T+ + D+ L + E +D +I+++++L + +
Sbjct: 280 LTSTSCEQSDANHLALTSTSCEQSDANHLALLSLSNDETLQCFDNEKINENISL-NVDSH 338
Query: 528 NNTVVSKIKLGNYTDKKSITDF---EAFGYGLNV 620
+T + K+ T K+ +F + G GL+V
Sbjct: 339 ESTNLLTEKVETSTQKRERDNFGHGNSGGLGLHV 372
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 31.1 bits (67), Expect = 0.83
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 6/106 (5%)
Frame = +3
Query: 294 IMSPQNQFLCSGVVVSNGMILTSARC-SQQAIDHVLLNTTNDKNKDSCIALRVKKIEKFP 470
+ SP C G ++ G +LT+A C + D LL NK +K + P
Sbjct: 48 LRSPNGDQFCGGSLIDPGWVLTAAHCLVGEQPDSALLGAHYRSNKTVGTEKDIKVAQIIP 107
Query: 471 --TYDGG-EIHKDVALIYTEKYNNTV--VSKIKLGNYTDKKSITDF 593
Y E+ D+AL+ E N V V + L N + +F
Sbjct: 108 HKNYHSPIEMANDIALLKLENPANLVNGVGTVCLANNNTHLPVDEF 153
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/39 (23%), Positives = 24/39 (61%)
Frame = +3
Query: 255 RTAKPSEFPFMVAIMSPQNQFLCSGVVVSNGMILTSARC 371
+ A+P +P+ +++ + LC G ++S+ ++T++ C
Sbjct: 850 QNAQPHSWPWQISLRQGRRFHLCGGALISDRWVVTASHC 888
>SB_46577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Frame = +3
Query: 18 KMWVKTIFAYLCVFETILLNTSIFCYATNANKSIGD-ENREDIAETNEDSKEASL--EIP 188
K W+ A +CVF L T++ CY N+ S D + + + D++ A + ++P
Sbjct: 2 KSWIS--LASICVFLCFFLKTALQCYHCNSYTSFADCHSNSEPVQCGWDTRCAKIFFKLP 59
Query: 189 TENFLN----NLTACTRRENT 239
N N+ C R+ T
Sbjct: 60 KTNVYRKQCINIAYCKERKRT 80
>SB_38508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 143
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +3
Query: 54 VFETILLNTSIFCYATNANKSIGDENREDIAETNEDSKE 170
+FE + + T+I C TN N + D + +D + ++D +
Sbjct: 20 IFEYVAMATNIICTCTNNNNNDNDNDNDDDDDDDDDDDD 58
>SB_6854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +3
Query: 54 VFETILLNTSIFCYATNANKSIGDENREDIAETNEDSKE 170
+FE + + T+I C TN N + D + +D + ++D +
Sbjct: 65 IFEYVAMATNIICTCTNNNNNDNDNDNDDDDDDDDDDDD 103
>SB_50329| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 334
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 134 SVFITNTFVCVSSITKYGSIQ*YCFKNTQIGKYSFYPHFIFCK 6
SV T T +C++ + Y +I CF GKYSF P C+
Sbjct: 101 SVTGTKTAICIALLWVYSTIS-SCFPFFGWGKYSFLPGLWLCE 142
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 255 RTAKPSEFPFMVAIMSPQNQFLCSGVVVSNGMILTSARC 371
R AK +P++ AI + F C G +++ ++T+A C
Sbjct: 728 REAKAGAWPWLAAIYV-KGSFRCGGALIARDWVVTAAHC 765
>SB_53814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1301
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +3
Query: 75 NTSIFCYATNANKSIGDENREDIAETNEDSKEASLEIPT 191
N C A +++K GD + + AE++ + +++S E+P+
Sbjct: 505 NRHFSCAALSSDKEPGDNHFGEFAESSSEGQQSSKELPS 543
>SB_48530| Best HMM Match : HALZ (HMM E-Value=3.8)
Length = 147
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +3
Query: 327 GVVVSNGMILTSARCSQQAIDHVLLNTTNDKNKDSCIALRVKK 455
GV + + + ++R SQQ+ ++ L + +K K+ CI L+ K
Sbjct: 20 GVNLQEQLTIVNSRLSQQSAEYDQLKSERNKYKEECINLQGMK 62
>SB_30962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 733
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +3
Query: 327 GVVVSNGMILTSARCSQQAIDHVLLNTTNDKNKDSCIALRVKK 455
GV + + + ++R SQQ+ ++ L + +K K+ CI L+ K
Sbjct: 441 GVNLQEQLTIVNSRLSQQSAEYDQLKSERNKYKEECINLQGMK 483
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 28.3 bits (60), Expect = 5.9
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Frame = +3
Query: 261 AKPSEFPFMVAIMSPQNQF-----LCSGVVVSNGMILTSARC---SQQAIDHVLLNTTND 416
AK +P+ +++ N+ +C G VV+ I+T+A C S+ A D+ + +D
Sbjct: 110 AKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHCFAYSKDAKDYTIAVGEHD 169
Query: 417 KNKDSCIALR--VKKIEKFPTYDGGEIHK-DVALI 512
N R V++I P Y H DVALI
Sbjct: 170 LNATDGYEQRPDVERIILHPKYAPHNNHDYDVALI 204
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Frame = +3
Query: 267 PSEFPFMVAI-----MSPQNQFLCSGVVVSNGMILTSARC 371
P +P+ VA+ S N F C G +++ +LT+A C
Sbjct: 1169 PGGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHC 1208
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 27.9 bits (59), Expect = 7.7
Identities = 21/108 (19%), Positives = 47/108 (43%), Gaps = 5/108 (4%)
Frame = +3
Query: 216 ACTRRENTLMHEIRTAKPSEFPFMVAIMSPQNQFLCSGVVVSNGMILTSARCSQQAIDHV 395
+C R NT + AK ++P+ + + C G +++ ILT+ C ++
Sbjct: 2 SCGIRPNTRIVGGTAAKHGDWPWQAQLRTTSGFPYCGGSLIAPQWILTATHCVERKQASS 61
Query: 396 LLNTTNDKNKDSCIALR----VKKIEKFPTYDGGEIHK-DVALIYTEK 524
++ + + + + V K+ P+Y + + D+AL+ +K
Sbjct: 62 IVIRLGARRRVATVGTEKDYIVTKVITHPSYHKPKTYSHDIALLKLDK 109
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,801,132
Number of Sequences: 59808
Number of extensions: 361694
Number of successful extensions: 1035
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1693527500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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