Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10f02
         (345 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4PBB3 Cluster: Putative uncharacterized protein; n=1; ...    31   5.3  
UniRef50_Q1FN98 Cluster: Putative uncharacterized protein; n=1; ...    31   6.9  

>UniRef50_Q4PBB3 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 627

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +3

Query: 48  FNVSFMHYVKKKLALCTSSLY 110
           FN S +H + ++L LCTSS+Y
Sbjct: 487 FNASIVHVIARELELCTSSIY 507


>UniRef50_Q1FN98 Cluster: Putative uncharacterized protein; n=1;
           Clostridium phytofermentans ISDg|Rep: Putative
           uncharacterized protein - Clostridium phytofermentans
           ISDg
          Length = 414

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 8/50 (16%)
 Frame = +1

Query: 106 YILYSLAVVSTTFNCSRIEHLSSATMKTRS------SRTFEN--KCEINS 231
           Y + SLA  ST + C R  +L+S T+K+ S        TF +  KC+ NS
Sbjct: 313 YYITSLATGSTVYKCGRTTYLTSGTVKSSSDSWTINGTTFTDLLKCDYNS 362


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,793,489
Number of Sequences: 1657284
Number of extensions: 2997378
Number of successful extensions: 4551
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4551
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10703468375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)