Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10e24
(663 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22859| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_40264| Best HMM Match : DUF667 (HMM E-Value=0) 29 3.4
SB_13951| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_32407| Best HMM Match : WSC (HMM E-Value=0.0008) 28 5.9
SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0) 28 5.9
SB_9261| Best HMM Match : Chitin_synth_2 (HMM E-Value=2.7e-07) 28 5.9
SB_33107| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_46944| Best HMM Match : Myc-LZ (HMM E-Value=9.2) 28 7.8
SB_12619| Best HMM Match : DUF837 (HMM E-Value=4.9) 28 7.8
SB_52587| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2) 28 7.8
SB_52548| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_50379| Best HMM Match : Myc-LZ (HMM E-Value=9.2) 28 7.8
SB_7558| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 28 7.8
>SB_22859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1108
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -3
Query: 442 FVQIFFVDSSNSFFQFGHVVLVREPHQV*SH-VLLQPRTDVRVGKGI 305
F+++FF D S F H LV E + H V+++P+ VRVG +
Sbjct: 529 FIRVFFADFSKGFDLVDHNALVNEMKLLNVHNVIIRPQR-VRVGNAL 574
>SB_40264| Best HMM Match : DUF667 (HMM E-Value=0)
Length = 2074
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +2
Query: 230 EMSRKKMKRFQLPNLPRWWQAKVIQYAFAHPHVRARLEKHMGSNLVRLTDKNYMTELEER 409
E+S +KMK + + + +++ HP A +E M + VR +K Y T L R
Sbjct: 1786 ELSEEKMKEYMKALKTKKFSK--LEFCLRHPFTIALVEGEMSAEEVRKYEKRYETALASR 1843
>SB_13951| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 323 HVRARLEKHMGSNLVRLTD 379
H++ARL KH G NL+ TD
Sbjct: 338 HLKARLVKHFGENLISSTD 356
>SB_32407| Best HMM Match : WSC (HMM E-Value=0.0008)
Length = 832
Score = 28.3 bits (60), Expect = 5.9
Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Frame = +2
Query: 329 RARLEKHMGSNLVRLTD----KNYMTELEERIRAVNEENLNKRISSRVLDEMERLKRLIL 496
R + EKH+ L RL + + E+RIR N+ +R+ + MERL+R L
Sbjct: 242 RLKHEKHL-RRLKRLREQWGRRQRQLAREKRIRRENKRKERERLRRERVKLMERLRRRKL 300
Query: 497 VGKTPLKECPPELFHHPVFVFWRMVNREVARASKKRADAYYRKLKASQKFDQSMD 661
+++ E + R + E R + KRA + KL + Q M+
Sbjct: 301 ERARRIRK---ERMKRLQMMKLRKILLERKRRAAKRARIRHEKLMRKLRLQQKME 352
>SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1918
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/66 (22%), Positives = 34/66 (51%)
Frame = +2
Query: 323 HVRARLEKHMGSNLVRLTDKNYMTELEERIRAVNEENLNKRISSRVLDEMERLKRLILVG 502
H ++ H G +++ + D ++ ++ E + A E + KR++ + + +RL V
Sbjct: 327 HAKSLSYVHKGQSVMSVLDNSFGSQEEIVVEAKKEAEVIKRVNELRKEGLWSTRRLPKVQ 386
Query: 503 KTPLKE 520
+TP K+
Sbjct: 387 ETPRKK 392
>SB_9261| Best HMM Match : Chitin_synth_2 (HMM E-Value=2.7e-07)
Length = 2435
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 422 NEENLNKRISSRVLDEMERLKRLILVGKTPLKECPPE 532
N+ENL+++ S + D E +K L+ + + CPPE
Sbjct: 435 NKENLSRKKSKSLDDIHEEIKFEQLIRRARSESCPPE 471
>SB_33107| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1079
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 350 CASPAAHGRAGGQRHIVSLLPAT 282
C SP GRAG + + S+LP+T
Sbjct: 589 CISPRVKGRAGHKEKVFSVLPST 611
>SB_46944| Best HMM Match : Myc-LZ (HMM E-Value=9.2)
Length = 76
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 332 ARLEKHMGSNLVRLTDKNYMTELEERIRAVNEENLNKR 445
A++ K MGSN+ + +N + + +RIR ++N KR
Sbjct: 29 AQVHKFMGSNMREKSQRNQLLKKLKRIRNRYKDNTRKR 66
>SB_12619| Best HMM Match : DUF837 (HMM E-Value=4.9)
Length = 192
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 332 ARLEKHMGSNLVRLTDKNYMTELEERIRAVNEENLNKR 445
A++ K MGSN+ + +N + + +RIR ++N KR
Sbjct: 145 AQVHKFMGSNMREKSQRNQLLKKLKRIRNRYKDNTRKR 182
>SB_52587| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2)
Length = 237
Score = 27.9 bits (59), Expect = 7.8
Identities = 21/104 (20%), Positives = 40/104 (38%)
Frame = +2
Query: 203 EGEDETGEGEMSRKKMKRFQLPNLPRWWQAKVIQYAFAHPHVRARLEKHMGSNLVRLTDK 382
E E E E+ + + Q+ RWW + VRA K N R
Sbjct: 39 EARQELKERELEEARARAAQMEKTMRWWSDCTANWREKWGKVRAERNKAREDN--RQLKL 96
Query: 383 NYMTELEERIRAVNEENLNKRISSRVLDEMERLKRLILVGKTPL 514
+ ++ + E +++R+ ++++L+R + GK L
Sbjct: 97 KIEAQAKDIVTLKRERQEALEVNARLERDIDKLERELKRGKRVL 140
>SB_52548| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 332 ARLEKHMGSNLVRLTDKNYMTELEERIRAVNEENLNKR 445
A++ K MGSN+ + +N + + +RIR ++N KR
Sbjct: 23 AQVHKFMGSNMREKSQRNQLLKKLKRIRNRYKDNTRKR 60
>SB_50379| Best HMM Match : Myc-LZ (HMM E-Value=9.2)
Length = 77
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 332 ARLEKHMGSNLVRLTDKNYMTELEERIRAVNEENLNKR 445
A++ K MGSN+ + +N + + +RIR ++N KR
Sbjct: 30 AQVHKFMGSNMREKSQRNQLLKKLKRIRNRYKDNTRKR 67
>SB_7558| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 299
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 332 ARLEKHMGSNLVRLTDKNYMTELEERIRAVNEENLNKR 445
A++ K MGSN+ + +N + + +RIR ++N KR
Sbjct: 252 AQVHKFMGSNMREKSQRNQLLKKLKRIRNRYKDNTRKR 289
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,780,158
Number of Sequences: 59808
Number of extensions: 359906
Number of successful extensions: 916
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1705624125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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