Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10e23
         (717 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles ...   231   1e-62
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    27   0.77 
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    26   1.0  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           25   2.3  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           25   2.3  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           25   2.3  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           25   2.3  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           25   2.3  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    25   2.3  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   7.2  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   7.2  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   9.5  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   9.5  

>U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S13 mRNA, complete
           cds. ).
          Length = 151

 Score =  231 bits (566), Expect = 1e-62
 Identities = 107/126 (84%), Positives = 121/126 (96%)
 Frame = +3

Query: 255 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 434
           MGRMHAPGKGIS+SALPYRRSVP+WLKL+A+DVKEQI KLGKKG+TPSQIG++LRDSHGV
Sbjct: 1   MGRMHAPGKGISKSALPYRRSVPSWLKLSAEDVKEQIKKLGKKGMTPSQIGIILRDSHGV 60

Query: 435 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 614
           AQVRFV G K+LRIMKA+GL PD+PEDLY+LIKKAV++RKHLERNRKD DSKFRLIL+ES
Sbjct: 61  AQVRFVNGNKVLRIMKAVGLKPDIPEDLYFLIKKAVSIRKHLERNRKDIDSKFRLILIES 120

Query: 615 RIHRLA 632
           RIHRLA
Sbjct: 121 RIHRLA 126



 Score = 53.2 bits (122), Expect = 8e-09
 Identities = 23/25 (92%), Positives = 24/25 (96%)
 Frame = +1

Query: 634 RYYKTKSVLPPNWKYESSTASALVA 708
           RYYK K+VLPPNWKYESSTASALVA
Sbjct: 127 RYYKIKAVLPPNWKYESSTASALVA 151


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
            chain protein.
          Length = 1024

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +1

Query: 166  YCH*FVFRQPSFWILLLSLSDRRFSKKP--QTWVVCTLLVRVSPSRRCL 306
            +CH +   Q SFW+  +SL D +  ++P  QT     LL RVS  + C+
Sbjct: 977  HCH-YYETQTSFWL--VSLEDHQQFQRPEQQTLKAGNLLSRVSRCQVCI 1022


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -2

Query: 134  NGQPLKKVKLRKYIQIEIKKNNTK*KY 54
            NG  +KK  L K I + I  NN K +Y
Sbjct: 1037 NGHTMKKEALDKLIDMSISDNNKKERY 1063


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +2

Query: 359 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 472
           T    W + + + T     +  TWS P+    W   PP
Sbjct: 142 TTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPP 179


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +2

Query: 359 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 472
           T    W + + + T     +  TWS P+    W   PP
Sbjct: 142 TTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPP 179


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +2

Query: 359 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 472
           T    W + + + T     +  TWS P+    W   PP
Sbjct: 142 TTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPP 179


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +2

Query: 359 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 472
           T    W + + + T     +  TWS P+    W   PP
Sbjct: 141 TTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 178


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +2

Query: 359 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 472
           T    W + + + T     +  TWS P+    W   PP
Sbjct: 141 TTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 178


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +2

Query: 359 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 472
           T    W + + + T     +  TWS P+    W   PP
Sbjct: 142 TTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 179


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +3

Query: 429 GVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKK 536
           G++ V+F+T ++   I  +MG+   L  D  Y+ ++
Sbjct: 443 GMSTVKFITYQEASEISGSMGVGWSLQVDCVYIDRR 478


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +3

Query: 429 GVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKK 536
           G++ V+F+T ++   I  +MG+   L  D  Y+ ++
Sbjct: 444 GMSTVKFITYQEASEISGSMGVGWSLQVDCVYIDRR 479


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/49 (24%), Positives = 21/49 (42%)
 Frame = +2

Query: 308 PPQCPYLVEIDCRRCKGTNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRN 454
           PP  P  ++ID   C   +L+ ++    ++T     +   WS  S   N
Sbjct: 590 PPDVPNRIDIDVTGCSAVSLRLYEPLEGAITTKFKVQ---WSSRSDFSN 635


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/55 (16%), Positives = 29/55 (52%)
 Frame = +3

Query: 264 MHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSH 428
           ++  GK     ++ +   +   + + A  +++ +YK G+ G+T + + ++  +S+
Sbjct: 33  LNGTGKSNILDSICFVLGISNLVHVRATSLQDLVYKSGQAGITKATVTLIFDNSN 87


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 734,710
Number of Sequences: 2352
Number of extensions: 15444
Number of successful extensions: 43
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)