Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10e22
         (583 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       27   0.18 
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    23   2.2  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    23   2.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   5.1  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    21   6.7  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    21   6.7  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    21   6.7  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   6.7  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    21   6.7  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    21   6.7  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   8.9  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   8.9  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 5/109 (4%)
 Frame = +2

Query: 119 EVVPVSIAPFEDRKGNCSCGGFPTVTPDPGSLPLLSQTPSLVVKCDQE-GDNTCKILCNA 295
           ++ P + AP        +  G P +   PGS+P +   PS+     +   D +   L   
Sbjct: 408 QLPPSAGAPMPPIPNMSNMSGMPPLPNMPGSMPTMPTMPSMAGPIRRRISDKSALSLAGG 467

Query: 296 LATATKAKGPEILCSRLKDVNE--LKLSAFYKTCD--KPWSYANMTAEA 430
           L      +    +     D+NE   +   FYK  D   P++YA++  ++
Sbjct: 468 LYDEGTVRRRVAVDRSGIDINEEIQRNREFYKNADVRPPFTYASLIRQS 516


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 230 FEKVGADFQDLASQSEILRKS 168
           +EK   DFQD+ S SE  +++
Sbjct: 235 YEKRSTDFQDVESGSESFKRA 255


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 230 FEKVGADFQDLASQSEILRKS 168
           +EK   DFQD+ S SE  +++
Sbjct: 235 YEKRSTDFQDVESGSESFKRA 255


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 170 SCGGFPTVTPDPG 208
           SCGG PT+   PG
Sbjct: 369 SCGGGPTILTTPG 381


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = -1

Query: 217  GQTSRIWRHSRKSSARAVAFPVFEW 143
            G   R WR S   +  AV  P  EW
Sbjct: 1321 GHVVRPWRGSATLACNAVGDPTREW 1345


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = -1

Query: 217  GQTSRIWRHSRKSSARAVAFPVFEW 143
            G   R WR S   +  AV  P  EW
Sbjct: 1317 GHVVRPWRGSATLACNAVGDPTREW 1341


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -1

Query: 412 CVTPWFVARFVK 377
           CV P FVA FVK
Sbjct: 124 CVVPSFVADFVK 135


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 248 KCDQEGDNTCKILCNALATATK 313
           +C  EG+   ++L +ALAT  K
Sbjct: 56  RCTAEGNELKRVLPDALATDCK 77


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 74  ICILMLVGINYFLLAEVVP 130
           I IL+ + + + LLAE++P
Sbjct: 276 ISILLSLTVFFLLLAEIIP 294


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 74  ICILMLVGINYFLLAEVVP 130
           I IL+ + + + LLAE++P
Sbjct: 272 ISILLSLTVFFLLLAEIIP 290


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 210 VCPYFLKHQV 239
           +CPY LKH++
Sbjct: 454 LCPYTLKHKI 463


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 248 KCDQEGDNTCKILCNALATATK 313
           +C  EG+   ++L +ALAT  K
Sbjct: 56  RCTAEGNELKRVLPDALATDCK 77


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 248 KCDQEGDNTCKILCNALATATK 313
           +C  EG+   ++L +ALAT  K
Sbjct: 56  RCTAEGNELKRVLPDALATDCK 77


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +1

Query: 7   QYLFIQH*KRT*DGLLEGIFLRHLHSHVGR 96
           QY    H ++   G +  +FL   H H GR
Sbjct: 519 QYKIAVHSEQNVPGAVVRVFLGPKHDHQGR 548


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 194 SQSEILRKSSCLSGLRMGRY 135
           S++ +L +  C+S  R GR+
Sbjct: 41  SRNRVLLRGQCISSRRNGRH 60


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,926
Number of Sequences: 438
Number of extensions: 3162
Number of successful extensions: 22
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)