Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10e20
         (279 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    23   0.92 
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   2.8  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        20   4.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        20   4.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        20   4.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    20   6.5  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              19   8.6  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    19   8.6  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    19   8.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    19   8.6  

>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 22.6 bits (46), Expect = 0.92
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 71  PSSLRIPHIFRFFTKTFVIRTTS 3
           P+SL +P I ++   TF++ T S
Sbjct: 288 PTSLVLPLIAKYLLFTFIMNTVS 310


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
          protein.
          Length = 580

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -1

Query: 63 FKNSTYFQIFYENFCDTD 10
          +KN+  +QI+  +F D+D
Sbjct: 27 YKNALVYQIYPRSFQDSD 44


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 4.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 242 LCVNEIYSRE 271
           +CV EIYS+E
Sbjct: 36  ICVPEIYSKE 45


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 4.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 242 LCVNEIYSRE 271
           +CV EIYS+E
Sbjct: 36  ICVPEIYSKE 45


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 4.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 242 LCVNEIYSRE 271
           +CV EIYS+E
Sbjct: 36  ICVPEIYSKE 45


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +1

Query: 94  FECKYIVYE*PTYHRTY*RYC 156
           F+C+Y       Y++ Y ++C
Sbjct: 434 FQCRYPNASVTPYNKNYTKFC 454


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -1

Query: 69 FVFKNSTYFQIFYENFCDT 13
          F++ N T  Q+  +  C+T
Sbjct: 20 FIYSNETIAQVTDDENCET 38


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
          protein precursor protein.
          Length = 145

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -1

Query: 69 FVFKNSTYFQIFYENFCDT 13
          F++ N T  Q+  +  C+T
Sbjct: 20 FIYSNETIAQVTDDENCET 38


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 28  FVKNLKICGILKDEG 72
           F+KNL++  I +D G
Sbjct: 102 FMKNLELTQIRRDRG 116


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -3

Query: 157 NNSVSTSDDKSVTHTRCIYTQTMVESGSNLR 65
           N+ + +++     H    +TQ + ES SNL+
Sbjct: 377 NSCLGSTETYYSKHNTQQFTQYIPESSSNLQ 407


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,363
Number of Sequences: 438
Number of extensions: 1182
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5369883
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)