Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10e19
(452 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32053| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_18394| Best HMM Match : TFIID-31kDa (HMM E-Value=0) 32 0.26
SB_25472| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_48435| Best HMM Match : Ion_trans (HMM E-Value=1.7e-11) 29 1.8
SB_50799| Best HMM Match : I-set (HMM E-Value=0) 29 2.4
SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22) 29 2.4
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 29 2.4
SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_54886| Best HMM Match : SH3_2 (HMM E-Value=3.2e-24) 29 2.4
SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38) 29 2.4
SB_37150| Best HMM Match : 7tm_1 (HMM E-Value=0.011) 29 2.4
SB_48933| Best HMM Match : Drf_FH1 (HMM E-Value=1.4) 28 3.1
SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6) 28 3.1
SB_56420| Best HMM Match : CUB (HMM E-Value=0.45) 28 3.1
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_41022| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_34975| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 28 4.2
SB_14136| Best HMM Match : Exonuc_X-T (HMM E-Value=6e-25) 28 4.2
SB_51982| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036) 28 4.2
SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_10970| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_8470| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_22411| Best HMM Match : Kinesin (HMM E-Value=6.8e-17) 27 5.5
SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27) 27 5.5
SB_3188| Best HMM Match : Hyd_WA (HMM E-Value=2e-13) 27 5.5
SB_42709| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 27 7.3
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_35429| Best HMM Match : Laminin_EGF (HMM E-Value=5.3e-17) 27 7.3
SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2) 27 7.3
SB_3037| Best HMM Match : Homeobox (HMM E-Value=4.3e-27) 27 7.3
SB_33020| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22) 27 7.3
SB_43213| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_41996| Best HMM Match : Tropomyosin (HMM E-Value=0.26) 27 9.6
SB_38620| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_48721| Best HMM Match : TorD (HMM E-Value=5.3) 27 9.6
SB_36054| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 27 9.6
SB_20077| Best HMM Match : zf-RanBP (HMM E-Value=0.24) 27 9.6
>SB_32053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 33.1 bits (72), Expect = 0.11
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = -2
Query: 358 KRSARATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVA 179
K A A+P+ V ++P +P P PPL +PAS T+ P ++ A+ SI +
Sbjct: 296 KPQAAASPKPVAKPIPASPPSTGKPSP-PPL---GESPASNTSPPLISAAKSESSIGKLQ 351
Query: 178 RTASLEP 158
++ + P
Sbjct: 352 KSLAFNP 358
>SB_18394| Best HMM Match : TFIID-31kDa (HMM E-Value=0)
Length = 326
Score = 31.9 bits (69), Expect = 0.26
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -2
Query: 340 TPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLAT 212
TP T ++ STP+ PR T +V+ +ATP A T SL T
Sbjct: 194 TPSTSTPISTSTPIVATLPR-TVAMVTQTATPIIAGQTLSLVT 235
>SB_25472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1191
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 277 TPPLVSWSATPASATNTPSLATARLPH 197
TPP+ W A PA+ +P AR+ +
Sbjct: 106 TPPITGWDALPAAGVTSPEAHLARIKY 132
>SB_48435| Best HMM Match : Ion_trans (HMM E-Value=1.7e-11)
Length = 1496
Score = 29.1 bits (62), Expect = 1.8
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -2
Query: 331 TVLAVAVSTPLERARPRPTP---PLV-SWSATPASATNTPSLATARL 203
++LA S E P PTP PL +W+ T +S T TPS T L
Sbjct: 1338 SILASHTSFGTESLAPSPTPSKEPLGGTWANTRSSLTTTPSFPTTSL 1384
>SB_50799| Best HMM Match : I-set (HMM E-Value=0)
Length = 1195
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -2
Query: 424 PQFVKHFSSRTKYTGQHRNFDCKRSARATP 335
P+F +H S+T G H F C S R P
Sbjct: 67 PEFTRHPRSQTIKQGNHVTFGCAASGRPQP 96
>SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22)
Length = 1249
Score = 28.7 bits (61), Expect = 2.4
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -2
Query: 235 TNTPSLATARLPHSIATVARTASLEP 158
TN +L+TA+LPHS+ +++ + + P
Sbjct: 21 TNNVTLSTAKLPHSLGSLSPSTPISP 46
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.7 bits (61), Expect = 2.4
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Frame = -2
Query: 340 TPETVLAVAVSTPLERARPRP---TPPLVSWSATPASATNTPSLATARLPHSIATVARTA 170
TP T A +TP + P T P + TP AT TP+ T P + T +
Sbjct: 49 TPTTTTPPATTTPTKPTNTTPPATTTPTKPTTTTPP-ATTTPTTPTTTTPPATTTPTKPT 107
Query: 169 SLEP 158
+ P
Sbjct: 108 TTTP 111
>SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 28.7 bits (61), Expect = 2.4
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = -2
Query: 334 ETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVARTA 170
ET+ A A +TP A P PP+ TP TP+ A P +I TA
Sbjct: 84 ETIPAPAPTTPTSPATPASGPPI----RTPIPLKETPNPALESAPAAIPDATDTA 134
>SB_54886| Best HMM Match : SH3_2 (HMM E-Value=3.2e-24)
Length = 440
Score = 28.7 bits (61), Expect = 2.4
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -2
Query: 355 RSARATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVAR 176
R+A P + A +P E + + P+++ + T SAT+ P L T HS+ TV +
Sbjct: 60 RAAATAPVRPIFTAHMSPAEA--DKLSAPILNGNHTVTSATSPPLLTTHAHHHSLQTVTK 117
>SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38)
Length = 2084
Score = 28.7 bits (61), Expect = 2.4
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -2
Query: 355 RSARATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVAR 176
R+A P + A +P E + + P+++ + T SAT+ P L T HS+ TV +
Sbjct: 1607 RAAATAPVRPIFTAHMSPAEA--DKLSAPILNGNHTVTSATSPPLLTTHAHHHSLQTVTK 1664
>SB_37150| Best HMM Match : 7tm_1 (HMM E-Value=0.011)
Length = 211
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -2
Query: 352 SARATPETVLAVAVSTPLERARPRPTPPLVSWSATPASA 236
SA+ + LA + PLE A P P P + ATPASA
Sbjct: 142 SAKTIVSSCLATLLVRPLETA-PAPAPTTPTSPATPASA 179
>SB_48933| Best HMM Match : Drf_FH1 (HMM E-Value=1.4)
Length = 611
Score = 28.3 bits (60), Expect = 3.1
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -2
Query: 343 ATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLP-HSIATVARTAS 167
ATP+ A+ TP + P P + ATPA TP + +P IAT + +
Sbjct: 25 ATPDQPKAIQPETPKDTPSMLPVPEI----ATPAQQPETPKDIPSMVPVPEIATSQQPET 80
Query: 166 LEP 158
++P
Sbjct: 81 IQP 83
>SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6)
Length = 697
Score = 28.3 bits (60), Expect = 3.1
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -2
Query: 334 ETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSL--ATARLPHSIATVARTA 170
ET A A +TP A P PP+ + P T TP+L A A +P + T TA
Sbjct: 33 ETTPAPAPTTPTSPATPASGPPI--RTPIPLKETPTPALESAPAAMPDATETAWGTA 87
>SB_56420| Best HMM Match : CUB (HMM E-Value=0.45)
Length = 1017
Score = 28.3 bits (60), Expect = 3.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -2
Query: 337 PETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLA 215
P+T + + P A PTPP + S +P S T S++
Sbjct: 546 PQTTASAFPTPPQTTASASPTPPQTTASVSPTSPQTTASVS 586
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 28.3 bits (60), Expect = 3.1
Identities = 25/62 (40%), Positives = 28/62 (45%)
Frame = -2
Query: 349 ARATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVARTA 170
A PET A ++T E A P S T AT T SLAT L + A A TA
Sbjct: 84 ATTAPETTTASFLTTAPE-ATTAPETTTASLVTTAPEAT-TASLATTALLVTTAPEATTA 141
Query: 169 SL 164
SL
Sbjct: 142 SL 143
>SB_41022| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 580
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 3/51 (5%)
Frame = -2
Query: 364 DCKRSARATPETVLAVAVSTPLERARPR---PTPPLVSWSATPASATNTPS 221
+C R+ P T L +TP R PT P S TP S N PS
Sbjct: 322 ECNRNP-CNPPTTLGTDHTTPSNTTGNRTKVPTTPRTSEGETPTSLANAPS 371
>SB_34975| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 909
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -2
Query: 424 PQFVKHFSSRTKYTGQHRNFDCKRSARATP 335
P+F +H S+T G H F C S R P
Sbjct: 584 PEFTRHPRSQTIKQGNHVAFGCAASGRPQP 613
>SB_14136| Best HMM Match : Exonuc_X-T (HMM E-Value=6e-25)
Length = 1597
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -2
Query: 334 ETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATA 209
ET+ A+ ++TP+ A P PP+ + P TP+L +A
Sbjct: 603 ETIPALTLTTPISPAIPASGPPIT--TPIPLKEAPTPALESA 642
>SB_51982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 27.9 bits (59), Expect = 4.2
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = -2
Query: 337 PETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVARTASL 164
P T S+ +R+RP P+P V+ + SA S A+ + + T+SL
Sbjct: 159 PATKPTTGTSSRTDRSRPAPSPARVNQATATQSAKKVGSTASTEKQKKELSSSSTSSL 216
>SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036)
Length = 362
Score = 27.9 bits (59), Expect = 4.2
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = -2
Query: 337 PETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVARTASLEP 158
P T+ +A +TPL P PP P AT TP L P T+ A+ P
Sbjct: 148 PPTIPFLATTTPLLMVTTSPLPP----PTIPFLATTTPLLMVTTSPLPPPTIPFLATTTP 203
>SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1530
Score = 27.5 bits (58), Expect = 5.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 254 CDSCFCNEHSFSCDSTPAS 198
C SC CN ++C TP S
Sbjct: 829 CSSCLCNGGMWNCTDTPCS 847
>SB_10970| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 265 PVAVSVAVWLVQAVSTLRPQVPSQASLALIACSRSFCA 378
P+ ++A WL+ T +PSQ AL+AC+ CA
Sbjct: 737 PLEPALAQWLL----TREQMMPSQGPHALLACTNLICA 770
>SB_8470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3133
Score = 27.5 bits (58), Expect = 5.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 277 TPPLVSWSATPASATNTPSLATARLPH 197
TPP W A PA+ +P AR+ +
Sbjct: 2248 TPPKTGWDALPAAGDTSPEAHLARIKY 2274
>SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1574
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = -1
Query: 266 GIVVCDSCFCNEHSFSCDSTPASLDSDGRPNG 171
G C C CN H+ C PA + G +G
Sbjct: 1339 GSCSCYECNCNGHAVKCRFDPAVYQASGNVSG 1370
>SB_22411| Best HMM Match : Kinesin (HMM E-Value=6.8e-17)
Length = 505
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = -2
Query: 424 PQFVKHFSSRTKYTGQHRNFDCKRSARATPETVLAVAVSTPLERARPRPTPPLVS 260
PQ K+ +SR++ R KRS P + A +P TPP +S
Sbjct: 287 PQPSKNHASRSQSPAPPRGRSLKRSKSPAPGSAAAARSRSPSPARSSTSTPPTIS 341
>SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27)
Length = 522
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 334 ETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATA 209
ET+ A A +TP A P PP+ + P T TP+L +A
Sbjct: 425 ETIPAPAPTTPTSPATPASGPPI--RTPIPLKETPTPALESA 464
>SB_3188| Best HMM Match : Hyd_WA (HMM E-Value=2e-13)
Length = 1389
Score = 27.5 bits (58), Expect = 5.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 54 FEKLFYFVTNLQSLQWQNVDGD 119
+E++FY T + L W +DGD
Sbjct: 722 YEQIFYCPTRFEVLSWTRLDGD 743
>SB_42709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1616
Score = 27.1 bits (57), Expect = 7.3
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -2
Query: 352 SARATPETVLAVAVSTPLERARPRPTPPLVSWSATPASA--TNTPSL 218
SA+ + L + PLE P PTP + ATPAS T TP L
Sbjct: 1211 SAKTIVSSCLNTLLVRPLETI-PAPTPTTPTSPATPASGPLTRTPIL 1256
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -2
Query: 334 ETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATA 209
ET+ A A +TP A P PP+ + P T TP L +A
Sbjct: 124 ETIPAPAPTTPTSPATPASGPPI--RTPIPLKETPTPELESA 163
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 27.1 bits (57), Expect = 7.3
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = -2
Query: 346 RATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLP 200
+ATP+T TP +P+P + S P T TP+ + P
Sbjct: 17 KATPQTTPTPTKPTPTTHTPTKPSPTTPT-STAPTQTTPTPTTPSPTAP 64
>SB_35429| Best HMM Match : Laminin_EGF (HMM E-Value=5.3e-17)
Length = 218
Score = 27.1 bits (57), Expect = 7.3
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -1
Query: 266 GIVVCDSCFCNEHSFSCD 213
G C C CN HS CD
Sbjct: 14 GFSKCTRCKCNRHSLECD 31
>SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2)
Length = 782
Score = 27.1 bits (57), Expect = 7.3
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -2
Query: 334 ETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSL--ATARLPHSIAT 185
ET+ A A +TP A P PP+ + P T TP+L A A +P + T
Sbjct: 63 ETIPAPAPTTPTSPATPASGPPI--RTPIPLRETPTPALDSAPAAMPDATDT 112
>SB_3037| Best HMM Match : Homeobox (HMM E-Value=4.3e-27)
Length = 308
Score = 27.1 bits (57), Expect = 7.3
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -2
Query: 355 RSARATPETVLAVAVSTPL-ERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVA 179
++ R+ + L V+ P+ E TPP +SW A S+T S ATA +S ++
Sbjct: 223 QNRRSKFKKTLKVSEDNPVKEENSGSSTPPTISWQAHAPSSTE--SNATAE--NSKPVIS 278
Query: 178 RTASLEP 158
++ +EP
Sbjct: 279 QSGQVEP 285
>SB_33020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = -2
Query: 301 LERARPRPTPPLVSWSATPASATNTPSLATARLPHSI 191
+ R RP P PPL P T T R H+I
Sbjct: 139 VHRGRPSPVPPLPVNETAPTLVTTTSQPPAHRFCHNI 175
>SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22)
Length = 1197
Score = 27.1 bits (57), Expect = 7.3
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -2
Query: 295 RARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVART 173
R P P PP V T+ P A A +P++ T A T
Sbjct: 910 RKPPPPPPPRVDLEGAVVGDTSAPPSAVASIPNTWETSADT 950
>SB_43213| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 26.6 bits (56), Expect = 9.6
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -2
Query: 358 KRSARATPETVLAVAVST--PLERARPRPTPPLVSWSATPASATNTPSLATARL 203
K + + T E A A ST L R P+PTPP+ + P TP L T ++
Sbjct: 291 KGTNKPTTEEKPAPAKSTWADLFRGVPKPTPPVAALPPKP-KVVATPPLETKKI 343
>SB_41996| Best HMM Match : Tropomyosin (HMM E-Value=0.26)
Length = 363
Score = 26.6 bits (56), Expect = 9.6
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = -2
Query: 352 SARATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVAR 176
S R++ T L P+E RPR TPP + A+N PS ++ + A+
Sbjct: 251 SPRSSAITRLMRESPAPMEFKRPRLTPP-EKYDENQPLASNQPSSGGVKMDPELENAAK 308
>SB_38620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 26.6 bits (56), Expect = 9.6
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -2
Query: 295 RARPRPTPPLVSWSATPASATNTPSLATAR--LPH 197
R P P S+SA P+S +N P++ R +PH
Sbjct: 242 RGSPSGNPLSFSFSARPSSLSNLPTMVNIRGHMPH 276
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 26.6 bits (56), Expect = 9.6
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -2
Query: 334 ETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVARTA 170
ET+ A A + P+ A P PP + TP TP+ A P ++ TA
Sbjct: 644 ETIPAPAPTKPISPATPASGPP----TRTPIPLKETPTAALESAPAAMPDATDTA 694
>SB_48721| Best HMM Match : TorD (HMM E-Value=5.3)
Length = 138
Score = 26.6 bits (56), Expect = 9.6
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -2
Query: 346 RATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPS 221
R+ T+ + V R P P PP SW + + T+ PS
Sbjct: 47 RSVTATLASADVRRCFCRYAPPPHPPFASWRNSEEARTDRPS 88
>SB_36054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1267
Score = 26.6 bits (56), Expect = 9.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 244 QESQTTIPVAVSVAVWLVQAVSTLRPQVPSQASLALIA 357
Q S TTI ++++ A+S RPQ+PS L IA
Sbjct: 243 QASTTTIQPSLTIVHNYHPAISNHRPQLPSSHLLPFIA 280
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 26.6 bits (56), Expect = 9.6
Identities = 16/52 (30%), Positives = 21/52 (40%)
Frame = -2
Query: 352 SARATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPH 197
+A TP A A + P A P PP V PA+ N P+ R +
Sbjct: 154 TAATTPAAGAAAAAAPPPAAAAAAPPPP-VGKPVVPAALMNRPTRGERRFAY 204
>SB_20077| Best HMM Match : zf-RanBP (HMM E-Value=0.24)
Length = 346
Score = 26.6 bits (56), Expect = 9.6
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -2
Query: 349 ARATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLAT 212
A TP T A A +TP A TPP + PA+ T T + +T
Sbjct: 302 AATTPPTA-APAATTPPTVAPAATTPPTGEPTGAPAATTPTEAAST 346
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,499,199
Number of Sequences: 59808
Number of extensions: 237104
Number of successful extensions: 4436
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 4295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4429
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 908427626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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