Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10e17
         (722 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021481-5|CAA16336.2|  455|Caenorhabditis elegans Hypothetical ...    56   3e-08
U28928-5|AAQ01535.1|  434|Caenorhabditis elegans Hypothetical pr...    50   2e-06
U28928-4|AAA68337.2|  489|Caenorhabditis elegans Hypothetical pr...    50   2e-06
AF025468-4|AAB71045.1|  449|Caenorhabditis elegans Hypothetical ...    42   4e-04
Z68748-8|CAL36498.1|  583|Caenorhabditis elegans Hypothetical pr...    40   0.002
Z68748-4|CAD27622.1|  617|Caenorhabditis elegans Hypothetical pr...    40   0.002
Z68748-3|CAA92953.2|  615|Caenorhabditis elegans Hypothetical pr...    40   0.002
Z97191-2|CAB10025.1|  481|Caenorhabditis elegans Hypothetical pr...    36   0.029
AL031630-22|CAA20995.2|  454|Caenorhabditis elegans Hypothetical...    34   0.12 
AF125971-5|AAD14765.1|  484|Caenorhabditis elegans Hypothetical ...    34   0.12 
AC006723-1|AAF59429.3|  534|Caenorhabditis elegans Hypothetical ...    31   1.1  
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr...    30   1.5  
U23518-2|AAC70884.4|  496|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z66498-2|CAA91291.2|  419|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z48809-4|CAB76413.2|  332|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AL110479-21|CAB54373.1|  462|Caenorhabditis elegans Hypothetical...    28   5.9  
Z73423-1|CAA97776.2|  492|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>AL021481-5|CAA16336.2|  455|Caenorhabditis elegans Hypothetical
           protein Y43F4B.7 protein.
          Length = 455

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 22/55 (40%), Positives = 39/55 (70%)
 Frame = +3

Query: 558 IHLLKGNIGTGILAMPDAFKNAGLIFGVFCTLIMGAMCTHCMXILVQCSHELCIR 722
           IH++K  +GTG+L++P AFK++GL  G+  T+++  +C +CM  +V  +H +C R
Sbjct: 56  IHMVKAMLGTGLLSLPLAFKHSGLFLGLILTVLICLICLYCMRQVVFAAHFVCNR 110


>U28928-5|AAQ01535.1|  434|Caenorhabditis elegans Hypothetical
           protein C44B7.6b protein.
          Length = 434

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 19/50 (38%), Positives = 34/50 (68%)
 Frame = +3

Query: 555 MIHLLKGNIGTGILAMPDAFKNAGLIFGVFCTLIMGAMCTHCMXILVQCS 704
           +I+L+KG +G G  ++P AFK +G + G+   +++G +C  CM  LV+C+
Sbjct: 27  LINLMKGMLGAGCFSVPLAFKQSGYVSGLVIIVVLGFLCALCMIKLVKCA 76


>U28928-4|AAA68337.2|  489|Caenorhabditis elegans Hypothetical
           protein C44B7.6a protein.
          Length = 489

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 19/50 (38%), Positives = 34/50 (68%)
 Frame = +3

Query: 555 MIHLLKGNIGTGILAMPDAFKNAGLIFGVFCTLIMGAMCTHCMXILVQCS 704
           +I+L+KG +G G  ++P AFK +G + G+   +++G +C  CM  LV+C+
Sbjct: 82  LINLMKGMLGAGCFSVPLAFKQSGYVSGLVIIVVLGFLCALCMIKLVKCA 131


>AF025468-4|AAB71045.1|  449|Caenorhabditis elegans Hypothetical
           protein T27A1.5 protein.
          Length = 449

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 17/51 (33%), Positives = 32/51 (62%)
 Frame = +3

Query: 555 MIHLLKGNIGTGILAMPDAFKNAGLIFGVFCTLIMGAMCTHCMXILVQCSH 707
           +IH++K  +GTG+L++P AFK++G+  G+     +  +C +C   L+   H
Sbjct: 45  LIHMIKVMMGTGMLSLPLAFKHSGIWLGLILLCFICLICIYCTRQLIFGQH 95


>Z68748-8|CAL36498.1|  583|Caenorhabditis elegans Hypothetical
           protein F13H10.3c protein.
          Length = 583

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 18/54 (33%), Positives = 30/54 (55%)
 Frame = +3

Query: 552 TMIHLLKGNIGTGILAMPDAFKNAGLIFGVFCTLIMGAMCTHCMXILVQCSHEL 713
           T+  +    +GT +LAMP A + AGL+ G+   L M A+C +   I+++    L
Sbjct: 136 TIFSIWNTMMGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTAYIVIESPKRL 189


>Z68748-4|CAD27622.1|  617|Caenorhabditis elegans Hypothetical
           protein F13H10.3b protein.
          Length = 617

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 18/54 (33%), Positives = 30/54 (55%)
 Frame = +3

Query: 552 TMIHLLKGNIGTGILAMPDAFKNAGLIFGVFCTLIMGAMCTHCMXILVQCSHEL 713
           T+  +    +GT +LAMP A + AGL+ G+   L M A+C +   I+++    L
Sbjct: 170 TIFSIWNTMMGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTAYIVIESPKRL 223


>Z68748-3|CAA92953.2|  615|Caenorhabditis elegans Hypothetical
           protein F13H10.3a protein.
          Length = 615

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 18/54 (33%), Positives = 30/54 (55%)
 Frame = +3

Query: 552 TMIHLLKGNIGTGILAMPDAFKNAGLIFGVFCTLIMGAMCTHCMXILVQCSHEL 713
           T+  +    +GT +LAMP A + AGL+ G+   L M A+C +   I+++    L
Sbjct: 168 TIFSIWNTMMGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTAYIVIESPKRL 221


>Z97191-2|CAB10025.1|  481|Caenorhabditis elegans Hypothetical
           protein H32K16.1 protein.
          Length = 481

 Score = 35.9 bits (79), Expect = 0.029
 Identities = 18/53 (33%), Positives = 29/53 (54%)
 Frame = +3

Query: 555 MIHLLKGNIGTGILAMPDAFKNAGLIFGVFCTLIMGAMCTHCMXILVQCSHEL 713
           +I+ + G IG G  ++  +FK AGL  G+    I+G +  + M  +V CS  L
Sbjct: 69  LINFICGMIGPGCFSLAVSFKQAGLWGGLALVFIVGFLSLYSMHKIVNCSQYL 121


>AL031630-22|CAA20995.2|  454|Caenorhabditis elegans Hypothetical
           protein Y38H6C.17 protein.
          Length = 454

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = +3

Query: 555 MIHLLKGNIGTGILAMPDAFKNAGLIFGVFCTLIMGAMCTHCMXILVQCSHEL 713
           +I+ + G +G G  ++  +FK AGL  G     I+G +  + M  +V CS  L
Sbjct: 41  LINFVCGMMGPGCFSLAVSFKQAGLWGGFASVFIIGGLSLYSMHKIVNCSQFL 93


>AF125971-5|AAD14765.1|  484|Caenorhabditis elegans Hypothetical
           protein Y4C6B.2a protein.
          Length = 484

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 13/49 (26%), Positives = 26/49 (53%)
 Frame = +3

Query: 552 TMIHLLKGNIGTGILAMPDAFKNAGLIFGVFCTLIMGAMCTHCMXILVQ 698
           T + ++    G G++A+P A  + G + G F  L+   +CT+   +L +
Sbjct: 16  TALFIVGETAGGGLIALPTAIVSTGAVTGAFLLLVAAVVCTYTGILLAE 64


>AC006723-1|AAF59429.3|  534|Caenorhabditis elegans Hypothetical
           protein Y19D10B.2 protein.
          Length = 534

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
 Frame = +3

Query: 351 KNVKI-KLKAMSDEKQPLLTGPNSPENVIEIQSTEPVINDDGPSTEKTKGDYCPASERCL 527
           KN+ + +    +D+         SP+  I ++  E  I  D  + ++  G YCP +    
Sbjct: 65  KNITLNEFPEPTDKAMKFSIDSGSPDFCITVEEMENFITADNATVDEIYGKYCPPT---- 120

Query: 528 EYPTSNFDTMIHLLK---GNIGTGILAMPDAFKNAGLIFG 638
              T N  T  ++ +   GN+  G  +  D  K+  +IFG
Sbjct: 121 --TTENLCTSPNICQKVFGNVEIGPNSNLDTMKSIEIIFG 158


>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical protein
            F54E4.1 protein.
          Length = 2948

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = -1

Query: 683  HAMSAHSTHNQCAKYTKNKSRIFEGVRHS*YPRSYITFKKMNHCIK 546
            H+  AH     CA Y  N+  IF G RH       I  +++ H IK
Sbjct: 2801 HSWVAHPEGATCALYVPNQQTIFSGGRHGEICLWDIRQRQLRHTIK 2846


>U23518-2|AAC70884.4|  496|Caenorhabditis elegans Hypothetical
           protein F21D12.3 protein.
          Length = 496

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 558 IHLLKGNIGTGILAMPDAFKNAGLIFGVFCTL 653
           I ++   +G G++AMP AFK +GL  G+   L
Sbjct: 51  IFIIADMVGGGVVAMPVAFKLSGLPMGILIML 82


>Z66498-2|CAA91291.2|  419|Caenorhabditis elegans Hypothetical
           protein M195.2 protein.
          Length = 419

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 354 NVKIKLKAMSDEKQPLLTGPNSPENVIEIQSTEPV 458
           N  IK+K    ++QP  +  NSP+   + Q+++P+
Sbjct: 215 NAPIKIKIQVQQQQPQQSPQNSPQQQAQPQASQPI 249


>Z48809-4|CAB76413.2|  332|Caenorhabditis elegans Hypothetical
           protein T01E8.7 protein.
          Length = 332

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = -3

Query: 477 KDHHHLSLVRLIVFQLHFLDCLVQLGVAVF 388
           K  + ++LV+L++F LHF   L+ L + +F
Sbjct: 42  KTPNQMNLVKLVIFNLHFWSTLMDLFMGLF 71


>AL110479-21|CAB54373.1|  462|Caenorhabditis elegans Hypothetical
           protein Y105C5B.25 protein.
          Length = 462

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 175 YISPKNIGNTLLREHNINKSIFC 107
           Y+ P +I  TL+ +H+I K ++C
Sbjct: 89  YVYPDHISITLITQHSIKKQLYC 111


>Z73423-1|CAA97776.2|  492|Caenorhabditis elegans Hypothetical
           protein C03A3.2 protein.
          Length = 492

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 579 IGTGILAMPDAFKNAGLIFGV 641
           +GTG LA+P AF+ AG +  +
Sbjct: 27  VGTGALALPKAFQTAGWLLSI 47


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,931,008
Number of Sequences: 27780
Number of extensions: 276128
Number of successful extensions: 677
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)