Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10e17
         (722 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    26   0.31 
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    25   0.55 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   2.9  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   6.7  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   8.9  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   8.9  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   8.9  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 26.2 bits (55), Expect = 0.31
 Identities = 13/53 (24%), Positives = 28/53 (52%)
 Frame = -3

Query: 546 SLMLDILNTFLMQGNSRLLFSQLKDHHHLSLVRLIVFQLHFLDCLVQLGVAVF 388
           +++L + +   + GN+ ++ + +++ +  +     V  L F DCLV L V  F
Sbjct: 49  AILLFLFSVATVFGNTLVILAVVRERYLHTATNYFVTSLAFADCLVGLVVMPF 101


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 25.4 bits (53), Expect = 0.55
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -2

Query: 517 SDAGQ*SPFVFSVEGPSSFITGSVDCISITFSGLFGPVRSGCFSS 383
           S+A   S   FS+E  S  +   +D   + F GL   +  GC++S
Sbjct: 291 SEAAARSFVPFSIERSSQSVAEVMDRNGVLFFGLLSDLAIGCWNS 335


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -1

Query: 341 TLFINFLCYLIEYE*SHQCFMKLINIKLFKLLVSRLRK 228
           T+FIN L +L +    +    K+I   + ++L+  LRK
Sbjct: 338 TMFINILKFLKQKYVKNSKLEKVIKHDILRMLIIDLRK 375


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 445 DCISITFSGLFGPVRSGCFSSLIAFNL 365
           D + +  SGL   VRS C   L+ F+L
Sbjct: 131 DRLWVLDSGLINNVRSVCPPQLLVFDL 157


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 445 DCISITFSGLFG 410
           DC+++ FSG+ G
Sbjct: 408 DCVTLLFSGIVG 419


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -1

Query: 293 HQCFMKLINIK 261
           H+CFM++ N+K
Sbjct: 559 HKCFMRVENVK 569


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 445 DCISITFSGLFG 410
           DC+++ FSG+ G
Sbjct: 408 DCVTLLFSGIVG 419


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,714
Number of Sequences: 438
Number of extensions: 3243
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)