Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10e16
         (718 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY534241-1|AAT07090.1|  650|Homo sapiens XK-related protein 4 pr...    31   4.1  
AK056450-1|BAB71186.1|  568|Homo sapiens protein ( Homo sapiens ...    31   4.1  
AB067476-1|BAB67782.1|  505|Homo sapiens KIAA1889 protein protein.     31   4.1  
AB051500-1|BAB21804.2| 1652|Homo sapiens KIAA1713 protein protein.     31   4.1  
D13636-1|BAA02800.1|  911|Homo sapiens KIAA0011 protein.               30   7.2  
BT009799-1|AAP88801.1|  911|Homo sapiens general transcription f...    30   7.2  
BC020981-1|AAH20981.1|  911|Homo sapiens general transcription f...    30   7.2  
BC000212-1|AAH00212.1|  585|Homo sapiens GTF3C2 protein protein.       30   7.2  
AC109828-1|AAY24049.1|  534|Homo sapiens unknown protein.              30   7.2  

>AY534241-1|AAT07090.1|  650|Homo sapiens XK-related protein 4
           protein.
          Length = 650

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +2

Query: 164 FQNVQNAIHLYSWMNIKQDHLNCNKFL*PFLMYLIFDKDTSIL*LQYFLCSPFI 325
           F  V   I+++SW N+K+    C  F+  F++ L   ++T++  L Y   +P I
Sbjct: 433 FDMVVGIIYIFSWFNVKEGRTRCRLFIYYFVILL---ENTALSALWYLYKAPQI 483


>AK056450-1|BAB71186.1|  568|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31888 fis, clone NT2RP7003055. ).
          Length = 568

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 31  DAYSKKCSCNREKATVFCRSCGFYCN 108
           D    KCSC R KA + C+ CG +C+
Sbjct: 527 DELELKCSC-RLKAMIVCKGCGAFCH 551


>AB067476-1|BAB67782.1|  505|Homo sapiens KIAA1889 protein protein.
          Length = 505

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +2

Query: 164 FQNVQNAIHLYSWMNIKQDHLNCNKFL*PFLMYLIFDKDTSIL*LQYFLCSPFI 325
           F  V   I+++SW N+K+    C  F+  F++ L   ++T++  L Y   +P I
Sbjct: 288 FDMVVGIIYIFSWFNVKEGRTRCRLFIYYFVILL---ENTALSALWYLYKAPQI 338


>AB051500-1|BAB21804.2| 1652|Homo sapiens KIAA1713 protein protein.
          Length = 1652

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 31   DAYSKKCSCNREKATVFCRSCGFYCN 108
            D    KCSC R KA + C+ CG +C+
Sbjct: 1611 DELELKCSC-RLKAMIVCKGCGAFCH 1635


>D13636-1|BAA02800.1|  911|Homo sapiens KIAA0011 protein.
          Length = 911

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
 Frame = +2

Query: 572 PYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVFPERYDMSFFKRG-LW 715
           PY  +  +S     QR  LP    L+  N   S T  PER+D+SFF  G LW
Sbjct: 347 PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPERWDVSFFTGGPLW 398


>BT009799-1|AAP88801.1|  911|Homo sapiens general transcription
           factor IIIC, polypeptide 2, beta 110kDa protein.
          Length = 911

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
 Frame = +2

Query: 572 PYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVFPERYDMSFFKRG-LW 715
           PY  +  +S     QR  LP    L+  N   S T  PER+D+SFF  G LW
Sbjct: 347 PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPERWDVSFFTGGPLW 398


>BC020981-1|AAH20981.1|  911|Homo sapiens general transcription
           factor IIIC, polypeptide 2, beta 110kDa protein.
          Length = 911

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
 Frame = +2

Query: 572 PYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVFPERYDMSFFKRG-LW 715
           PY  +  +S     QR  LP    L+  N   S T  PER+D+SFF  G LW
Sbjct: 347 PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPERWDVSFFTGGPLW 398


>BC000212-1|AAH00212.1|  585|Homo sapiens GTF3C2 protein protein.
          Length = 585

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
 Frame = +2

Query: 572 PYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVFPERYDMSFFKRG-LW 715
           PY  +  +S     QR  LP    L+  N   S T  PER+D+SFF  G LW
Sbjct: 347 PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPERWDVSFFTGGPLW 398


>AC109828-1|AAY24049.1|  534|Homo sapiens unknown protein.
          Length = 534

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
 Frame = +2

Query: 572 PYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVFPERYDMSFFKRG-LW 715
           PY  +  +S     QR  LP    L+  N   S T  PER+D+SFF  G LW
Sbjct: 347 PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPERWDVSFFTGGPLW 398


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,945,260
Number of Sequences: 237096
Number of extensions: 2402228
Number of successful extensions: 4326
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4326
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)