Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10e13
         (492 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     25   1.4  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    24   3.2  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    22   9.9  

>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = -2

Query: 410 SICIDTMCLPGTMTRPNTLGSSVSPSLFFKYSEQAPKITFASLSVHRN 267
           ++ + T+C+PGT      L S        K S  APK     L + +N
Sbjct: 555 TLAMSTLCIPGTSVPCERLFSKAGQIYSEKRSRLAPKKLQEILFIQQN 602


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = -2

Query: 251 LPSVISILNFIFNHFLSFAFPSSSTT*GASEVVLLPSLLISLACSNLY 108
           LP + S+ +   NH  S   P SST+   S     P  ++S A S ++
Sbjct: 223 LPLIRSLADIGKNHSSSKNMPRSSTSKSISSANSFPMHVVSSAPSGMH 270


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 281  SVHRNTPIRTLPSVISIL 228
            S+HRN   +T P  + +L
Sbjct: 1341 SIHRNNNFQTFPQAVLVL 1358


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 455,893
Number of Sequences: 2352
Number of extensions: 8187
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43554477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)