Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10e11
         (681 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   1.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.1  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   9.3  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.3  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   9.3  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   9.3  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = -1

Query: 570 FLLRHVLRSEERYLHF---TRIPSIVDCVVTALHHVSSPVEMNLRKDVLVLERST 415
           FL RH +   + Y+HF     +  I D ++     ++  +  N+ ++ L L R T
Sbjct: 146 FLCRHTVEYFQNYIHFFYQLLLYLITDMILMRYKELNRVILDNMSRNHLFLVRRT 200


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 248 TSQPPSMFP*LAPYH 292
           +S PP +FP  AP H
Sbjct: 184 SSSPPGVFPVDAPMH 198


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 313 WYNFDVFPHKVKLSNT 360
           W N D+   +VKL+NT
Sbjct: 114 WMNQDISFSRVKLTNT 129


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +2

Query: 365 IQSSLGRNGKQSDRT*KVDRSKTSTSFRKFISTG 466
           I S  G+NGK SD+    + SK S    +  S G
Sbjct: 77  ITSDGGKNGKLSDKFLDDEMSKKSCQGCEMPSAG 110


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +2

Query: 365 IQSSLGRNGKQSDRT*KVDRSKTSTSFRKFISTG 466
           I S  G+NGK SD+    + SK S    +  S G
Sbjct: 25  ITSDGGKNGKLSDKFLDDEMSKKSCQGCEMPSAG 58


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +2

Query: 365 IQSSLGRNGKQSDRT*KVDRSKTSTSFRKFISTG 466
           I S  G+NGK SD+    + SK S    +  S G
Sbjct: 208 ITSDGGKNGKLSDKFLDDEMSKKSCQGCEMPSAG 241


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,083
Number of Sequences: 336
Number of extensions: 4087
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)