Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10e11
(681 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1006 - 7972645-7973811 31 1.1
03_05_1138 + 30684014-30684386,30684480-30684865,30684870-306849... 30 1.5
11_05_0071 - 18821475-18821609,18821691-18822065,18822142-188226... 29 2.6
08_02_0970 - 23140109-23140192,23140604-23140657,23140783-231407... 29 4.5
08_02_0711 + 20305341-20305859,20306278-20306448,20306995-203070... 29 4.5
08_02_0710 + 20275834-20276352,20276970-20277140,20277692-202777... 29 4.5
06_03_0819 - 24977204-24977290,24977372-24977746,24977823-249781... 28 6.0
03_04_0175 - 18092055-18092583,18092819-18093378 28 6.0
12_01_0343 + 2640822-2641106,2641488-2641556,2641708-2641887,264... 28 7.9
04_03_0423 + 15766965-15767612,15781082-15782299 28 7.9
04_03_0414 + 15633517-15634164,15647700-15648917 28 7.9
>01_01_1006 - 7972645-7973811
Length = 388
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 550 QIGRTLPAFHQDTFYRRLCGHCPPSCQLPSGNEFAKRCACLG 425
Q+ R +P H D + L P C+LP G +C C+G
Sbjct: 227 QLRRVVPGIHHDLRFIPL----PDGCELPPGTADLDKCRCVG 264
>03_05_1138 +
30684014-30684386,30684480-30684865,30684870-30684962,
30684963-30685108,30685211-30685454,30685562-30685666,
30685774-30685956,30686052-30686738
Length = 738
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = +1
Query: 214 QWIYYWSDFE-GHLPTPINVSITGSIPYTCPELKWYNFDVFPHKVKLSNTGYTVLIGAKW 390
+W+ SDF+ G L T + + + I Y +FPH V L T L+ ++
Sbjct: 143 EWVSMVSDFQKGSLSTRLGIPMIYGIDAVHGHNNVYGATIFPHNVALGATRQAALLSPRF 202
Query: 391 KAERPY 408
P+
Sbjct: 203 AKLLPF 208
>11_05_0071 -
18821475-18821609,18821691-18822065,18822142-18822674,
18822776-18823331,18824593-18824621,18824970-18825018
Length = 558
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 148 KTDEVKETPNEEAEKVPLYGTLQWIYYWSDFEGHLPTPIN 267
KTDEV+E EE++ P++G +W Y PTP N
Sbjct: 177 KTDEVEEQEEEESDGYPIFGA-KWCSY-----HEFPTPHN 210
>08_02_0970 -
23140109-23140192,23140604-23140657,23140783-23140794,
23140842-23141009,23141371-23141473,23141574-23141680,
23143766-23143977,23144136-23144223
Length = 275
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/76 (25%), Positives = 36/76 (47%)
Frame = +1
Query: 307 LKWYNFDVFPHKVKLSNTGYTVLIGAKWKAERPYLEGGPFQDKHIFSQIHFHWGADMMEG 486
L + ++ P + + N G+ + + A R + G ++ K Q+H+H
Sbjct: 78 LGYLDYSYLPAEASMVNRGHDIEVKFMGNAGRVVINGKAYKLK----QLHWH------TP 127
Query: 487 SDHTVDDRRYPGEMQV 534
S+HTV+ RRY E+ +
Sbjct: 128 SEHTVNGRRYDMELHL 143
>08_02_0711 +
20305341-20305859,20306278-20306448,20306995-20307048,
20307389-20307475
Length = 276
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/103 (22%), Positives = 43/103 (41%)
Frame = +1
Query: 244 GHLPTPINVSITGSIPYTCPELKWYNFDVFPHKVKLSNTGYTVLIGAKWKAERPYLEGGP 423
G + +PIN+ + P L N+ + N G+ +++ A + G
Sbjct: 61 GKMQSPINLGLLDLT--LAPGLGNLNYTYKNANASVVNRGHDIMVRFDGDAGSLKINGTA 118
Query: 424 FQDKHIFSQIHFHWGADMMEGSDHTVDDRRYPGEMQVTFFRSE 552
+Q Q+H+H S+HT+D RRY E+ + ++
Sbjct: 119 YQ----LRQMHWH------TPSEHTIDGRRYDMELHMVHLNAQ 151
>08_02_0710 +
20275834-20276352,20276970-20277140,20277692-20277745,
20277848-20277934
Length = 276
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/103 (22%), Positives = 43/103 (41%)
Frame = +1
Query: 244 GHLPTPINVSITGSIPYTCPELKWYNFDVFPHKVKLSNTGYTVLIGAKWKAERPYLEGGP 423
G + +PIN+ + P L N+ + N G+ +++ A + G
Sbjct: 62 GKMQSPINLGLLDLT--LAPGLGNLNYTYQNANASVVNRGHDIMVRFDGDAGSLKINGTA 119
Query: 424 FQDKHIFSQIHFHWGADMMEGSDHTVDDRRYPGEMQVTFFRSE 552
+Q Q+H+H S+HT+D RRY E+ + ++
Sbjct: 120 YQ----LRQMHWH------TPSEHTIDGRRYDMELHMVHLNAQ 152
>06_03_0819 -
24977204-24977290,24977372-24977746,24977823-24978199,
24978456-24978770,24978861-24979296,24979386-24979463
Length = 555
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 148 KTDEVKETPNEEAEKVPLYGTLQWIYYWSDFEGHLPTPIN 267
+TDEV+E EE++ P++G +W Y PTP N
Sbjct: 242 RTDEVEEQEEEESDGYPIFGA-KWCSY-----HEFPTPHN 275
>03_04_0175 - 18092055-18092583,18092819-18093378
Length = 362
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Frame = -1
Query: 324 KVVPF*F--RARIWYGASYGNIDGGWE 250
K+ PF F RA+ WY ++ G ++G WE
Sbjct: 81 KLFPFSFHERAKQWYTSTVGCVNGDWE 107
>12_01_0343 +
2640822-2641106,2641488-2641556,2641708-2641887,
2642015-2642081,2643237-2644015
Length = 459
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/98 (21%), Positives = 45/98 (45%)
Frame = +1
Query: 241 EGHLPTPINVSITGSIPYTCPELKWYNFDVFPHKVKLSNTGYTVLIGAKWKAERPYLEGG 420
EG +PI+++ +P + + N++ + N G + + + + + G
Sbjct: 235 EGRSQSPIDINTKTVVPRSDLDTLDRNYNAV--NATIVNNGKDITMKFHGEVGQVIIAGK 292
Query: 421 PFQDKHIFSQIHFHWGADMMEGSDHTVDDRRYPGEMQV 534
P++ F IH+H S+HT++ RR+P E+ +
Sbjct: 293 PYR----FQAIHWH------APSEHTINGRRFPLELHL 320
>04_03_0423 + 15766965-15767612,15781082-15782299
Length = 621
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 352 SNTGYTVLIGAKWKAERPYLEGG 420
+N GY G +W RPY +GG
Sbjct: 461 NNNGYRPQGGQRWNQPRPYYQGG 483
>04_03_0414 + 15633517-15634164,15647700-15648917
Length = 621
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 352 SNTGYTVLIGAKWKAERPYLEGG 420
+N GY G +W RPY +GG
Sbjct: 461 NNNGYRPQGGQRWNQPRPYYQGG 483
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,338,139
Number of Sequences: 37544
Number of extensions: 434725
Number of successful extensions: 1177
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1177
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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