Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10e11
(681 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39743-2|AAA80437.6| 310|Caenorhabditis elegans Carbonic anhydr... 75 6e-14
U41539-1|AAB52498.1| 246|Caenorhabditis elegans Carbonic anhydr... 61 8e-10
Z68118-4|CAD18873.1| 235|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z68118-3|CAA92190.2| 280|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AF000198-1|AAB53054.1| 319|Caenorhabditis elegans Carbonic anhy... 52 3e-07
U23517-10|AAB93341.3| 337|Caenorhabditis elegans Carbonic anhyd... 49 3e-06
U12966-4|AAA20616.1| 365|Caenorhabditis elegans Carbonic anhydr... 48 8e-06
AF016446-6|AAC24162.1| 322|Caenorhabditis elegans Serpentine re... 29 2.3
AL021446-1|CAA16265.1| 398|Caenorhabditis elegans Hypothetical ... 29 4.1
AY551964-1|AAS65428.1| 795|Caenorhabditis elegans enhancer of p... 28 5.4
AL132904-22|CAC35840.2| 795|Caenorhabditis elegans Hypothetical... 28 5.4
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 28 5.4
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 28 5.4
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 28 5.4
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 28 5.4
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 28 5.4
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 28 5.4
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 28 5.4
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 28 5.4
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 28 5.4
U50135-3|AAA93454.1| 329|Caenorhabditis elegans Squashed vulva ... 27 9.4
>U39743-2|AAA80437.6| 310|Caenorhabditis elegans Carbonic anhydrase
protein 5 protein.
Length = 310
Score = 74.5 bits (175), Expect = 6e-14
Identities = 34/101 (33%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Frame = +1
Query: 307 LKWYNFDVFPHKVKLSNTGYTVLIGA--KWKAERPYLEGGPFQDKHIFSQIHFHWGADMM 480
+ + N+D+ K++LSNTG T+ G W+ ++P ++GG + ++ +Q H HWG +
Sbjct: 67 MHFLNYDM-DGKIELSNTGRTLFAGGFESWQHKQPMIQGGGLKHRYKLAQFHLHWGQNDA 125
Query: 481 EGSDHTVDDRRYPGEMQVTFFRSEYMTQEEALRHPDGVVMI 603
GS+H + YP E+ + R E +T +EAL PDG+ ++
Sbjct: 126 VGSEHAMGSLHYPAELHLVHVR-EGLTLKEALSRPDGLAVV 165
>U41539-1|AAB52498.1| 246|Caenorhabditis elegans Carbonic anhydrase
protein 3 protein.
Length = 246
Score = 60.9 bits (141), Expect = 8e-10
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Frame = +1
Query: 244 GHLPTPINVSITGSIPY--TCPELKWYNFDVFPHKVKLSNTGYTVLIGAKWKAERPYLEG 417
G +PIN+ + G + T +K+ N+D P + + N G++V + + ++E P + G
Sbjct: 21 GQHQSPINIDL-GEVERKDTHDGIKFVNYD-HPIQGDIVNNGHSVQMTPELRSEHPEIYG 78
Query: 418 GPFQDKHIFSQIHFHWGADMMEGSDHTVDDRRYPGEMQV 534
G + Q HFHWG + EGS+HT+ RYP E+ +
Sbjct: 79 GGLDQVYRLVQYHFHWGENDNEGSEHTLGGLRYPAELHL 117
>Z68118-4|CAD18873.1| 235|Caenorhabditis elegans Hypothetical
protein R01E6.3b protein.
Length = 235
Score = 53.6 bits (123), Expect = 1e-07
Identities = 21/62 (33%), Positives = 36/62 (58%)
Frame = +1
Query: 433 KHIFSQIHFHWGADMMEGSDHTVDDRRYPGEMQVTFFRSEYMTQEEALRHPDGVVMICYL 612
K +Q H HWG++ EGS+H +D ++ GE+ F+ + Y + AL PDG+ ++
Sbjct: 69 KFALAQFHAHWGSNSKEGSEHFLDGKQLSGEVHFVFWNTSYESFNVALSKPDGLAVVGVF 128
Query: 613 IK 618
+K
Sbjct: 129 LK 130
>Z68118-3|CAA92190.2| 280|Caenorhabditis elegans Hypothetical
protein R01E6.3a protein.
Length = 280
Score = 53.6 bits (123), Expect = 1e-07
Identities = 21/62 (33%), Positives = 36/62 (58%)
Frame = +1
Query: 433 KHIFSQIHFHWGADMMEGSDHTVDDRRYPGEMQVTFFRSEYMTQEEALRHPDGVVMICYL 612
K +Q H HWG++ EGS+H +D ++ GE+ F+ + Y + AL PDG+ ++
Sbjct: 114 KFALAQFHAHWGSNSKEGSEHFLDGKQLSGEVHFVFWNTSYESFNVALSKPDGLAVVGVF 173
Query: 613 IK 618
+K
Sbjct: 174 LK 175
>AF000198-1|AAB53054.1| 319|Caenorhabditis elegans Carbonic
anhydrase protein 6 protein.
Length = 319
Score = 52.4 bits (120), Expect = 3e-07
Identities = 19/63 (30%), Positives = 36/63 (57%)
Frame = +1
Query: 427 QDKHIFSQIHFHWGADMMEGSDHTVDDRRYPGEMQVTFFRSEYMTQEEALRHPDGVVMIC 606
++++ ++FHW + M GS+HT+ Y GEM + + + T +AL+ P+GV+ I
Sbjct: 126 EEQYHLDAVNFHWATEPMNGSEHTIGGVGYAGEMHLIHRNTRFATMADALKQPNGVIAIA 185
Query: 607 YLI 615
+
Sbjct: 186 VFL 188
>U23517-10|AAB93341.3| 337|Caenorhabditis elegans Carbonic
anhydrase protein 2 protein.
Length = 337
Score = 49.2 bits (112), Expect = 3e-06
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 6/137 (4%)
Frame = +1
Query: 244 GHLPTPINVSITGSIPYTCPELKWYNFDVFPHKVKLSNTGYTVLIGAKWKAERPYLE--G 417
G + +P+N+ + Y P L N + + NTG ++ K RP + G
Sbjct: 33 GQMQSPVNID-PSQLLYD-PHLMPINIEGNIVEAVFENTGQLPVVTVKDLPNRPTINITG 90
Query: 418 GPFQD-KHIFSQIHFHWG-ADMME-GSDHTVDDRRYPGEMQVTFFRSE-YMTQEEALRHP 585
GP ++ QI H+G AD E GS+HTVD R+P E+Q+ + S Y A+ P
Sbjct: 91 GPTMPYRYKLHQISVHFGRADEGEKGSEHTVDRVRFPAEIQLLAYNSALYPNFSVAMTSP 150
Query: 586 DGVVMICYLIKVVRSES 636
G++ + ++ + ++ S
Sbjct: 151 RGLLAVSVIVDIGKTTS 167
>U12966-4|AAA20616.1| 365|Caenorhabditis elegans Carbonic anhydrase
protein 1 protein.
Length = 365
Score = 47.6 bits (108), Expect = 8e-06
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Frame = +1
Query: 355 NTGYTVLIGAKWKAERPYLE--GGPFQD-KHIFSQIHFHWGADMMEGSDHTVDDRRYPGE 525
NTG V + + +++P + GP ++ +I FH G GS+HT++ RR+P E
Sbjct: 153 NTGQMVRVRIGYSSKKPSVNITSGPLYGYRYRVQRIDFHMGRKNENGSEHTINGRRFPME 212
Query: 526 MQVTFFRSE-YMTQEEALRHPDGVVMICYLI 615
+Q+ + ++ Y A + P G+ ++ L+
Sbjct: 213 VQLVAYNTDLYPNFTSASKSPHGIAILSVLV 243
>AF016446-6|AAC24162.1| 322|Caenorhabditis elegans Serpentine
receptor, class h protein20 protein.
Length = 322
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = -1
Query: 642 LSGFTPYNLYQITYHYNSVGVTQSFLLRH---VLRSEERYLHFTRI 514
+SG +NL+ + YN +++ F R+ V E ++ HF ++
Sbjct: 88 VSGSIQFNLFSVALAYNGASISELFYFRYKASVSYKEHKFTHFIQV 133
>AL021446-1|CAA16265.1| 398|Caenorhabditis elegans Hypothetical
protein F14F4.1 protein.
Length = 398
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -2
Query: 557 MYSDRKNVTCISPGYLLSSTVWSLPSIMSAPQWK*ICEKMCLS 429
+Y KN I+ + ++ W LPSI++A + +C+ + LS
Sbjct: 176 IYGQNKNTVKITYVIMFNTLAWLLPSILAAVFYYCVCKAVRLS 218
>AY551964-1|AAS65428.1| 795|Caenorhabditis elegans enhancer of
polycomb protein.
Length = 795
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -2
Query: 446 EKMCLSWNGPPSKYGRSAFHFAPMRTVYPVFESL 345
+K SWN PPS +G+ + + P T PV ESL
Sbjct: 349 KKNAESWNRPPSLFGQHSGN-VPTVTTKPVRESL 381
>AL132904-22|CAC35840.2| 795|Caenorhabditis elegans Hypothetical
protein Y111B2A.11 protein.
Length = 795
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -2
Query: 446 EKMCLSWNGPPSKYGRSAFHFAPMRTVYPVFESL 345
+K SWN PPS +G+ + + P T PV ESL
Sbjct: 349 KKNAESWNRPPSLFGQHSGN-VPTVTTKPVRESL 381
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 597 YNSVGVTQSFLLRHVLRSEERYLHFTRI 514
Y+ V SFLL H LR ++ YLH T +
Sbjct: 2447 YSWFAVFSSFLLAHYLRHDKIYLHKTSL 2474
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 597 YNSVGVTQSFLLRHVLRSEERYLHFTRI 514
Y+ V SFLL H LR ++ YLH T +
Sbjct: 2426 YSWFAVFSSFLLAHYLRHDKIYLHKTSL 2453
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 597 YNSVGVTQSFLLRHVLRSEERYLHFTRI 514
Y+ V SFLL H LR ++ YLH T +
Sbjct: 2482 YSWFAVFSSFLLAHYLRHDKIYLHKTSL 2509
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 597 YNSVGVTQSFLLRHVLRSEERYLHFTRI 514
Y+ V SFLL H LR ++ YLH T +
Sbjct: 2436 YSWFAVFSSFLLAHYLRHDKIYLHKTSL 2463
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 597 YNSVGVTQSFLLRHVLRSEERYLHFTRI 514
Y+ V SFLL H LR ++ YLH T +
Sbjct: 2436 YSWFAVFSSFLLAHYLRHDKIYLHKTSL 2463
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 597 YNSVGVTQSFLLRHVLRSEERYLHFTRI 514
Y+ V SFLL H LR ++ YLH T +
Sbjct: 2447 YSWFAVFSSFLLAHYLRHDKIYLHKTSL 2474
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 597 YNSVGVTQSFLLRHVLRSEERYLHFTRI 514
Y+ V SFLL H LR ++ YLH T +
Sbjct: 2436 YSWFAVFSSFLLAHYLRHDKIYLHKTSL 2463
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 597 YNSVGVTQSFLLRHVLRSEERYLHFTRI 514
Y+ V SFLL H LR ++ YLH T +
Sbjct: 2426 YSWFAVFSSFLLAHYLRHDKIYLHKTSL 2453
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 597 YNSVGVTQSFLLRHVLRSEERYLHFTRI 514
Y+ V SFLL H LR ++ YLH T +
Sbjct: 2482 YSWFAVFSSFLLAHYLRHDKIYLHKTSL 2509
>U50135-3|AAA93454.1| 329|Caenorhabditis elegans Squashed vulva
protein 7 protein.
Length = 329
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 193 VPLYGTLQWIYYWSDFEGHLPTPINVSITGSIPYT 297
V ++ + +++ W++F G INVS+ GSI YT
Sbjct: 271 VGMFSSGDYVFQWANFTG-----INVSVFGSILYT 300
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,573,879
Number of Sequences: 27780
Number of extensions: 371575
Number of successful extensions: 1014
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -