Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10e09
         (586 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0AY93 Cluster: Putative uncharacterized protein; n=1; ...    34   2.8  
UniRef50_Q1LGZ7 Cluster: Transcriptional regulator, LysR family;...    33   5.0  
UniRef50_Q1D3J0 Cluster: Putative uncharacterized protein; n=2; ...    32   8.7  
UniRef50_A7C413 Cluster: Transposase, IS630; n=3; Beggiatoa sp. ...    32   8.7  

>UniRef50_Q0AY93 Cluster: Putative uncharacterized protein; n=1;
           Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
           Putative uncharacterized protein - Syntrophomonas wolfei
           subsp. wolfei (strain Goettingen)
          Length = 706

 Score = 33.9 bits (74), Expect = 2.8
 Identities = 23/59 (38%), Positives = 33/59 (55%)
 Frame = -2

Query: 426 SLQVLRSELLGRRTESVEFQMYVPAPRAKSRKQRKREVIRTQWLKCICHLTSH*TYLIA 250
           SL  L++  LG+R ES+EF+    A    ++ Q ++E IR Q L+ I   TS    LIA
Sbjct: 607 SLFKLKTRYLGKRVESLEFRQIQLADSKTAQAQNEKEKIRLQ-LQEIAEFTSKIDELIA 664


>UniRef50_Q1LGZ7 Cluster: Transcriptional regulator, LysR family;
           n=2; Burkholderiaceae|Rep: Transcriptional regulator,
           LysR family - Ralstonia metallidurans (strain CH34 /
           ATCC 43123 / DSM 2839)
          Length = 406

 Score = 33.1 bits (72), Expect = 5.0
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +1

Query: 352 RRHIHLEFDTLRSPAKQLTTQHLKGSLLSNINLSVIRPI 468
           RRH HL F TL SP ++LT   L G +  +  L  +RP+
Sbjct: 217 RRHPHLRFRTLESPYEELTAGLLAGRI--DFILGAVRPL 253


>UniRef50_Q1D3J0 Cluster: Putative uncharacterized protein; n=2;
           Cystobacterineae|Rep: Putative uncharacterized protein -
           Myxococcus xanthus (strain DK 1622)
          Length = 173

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -2

Query: 420 QVLRSELLGRRTESVEFQMYVPAPRAKSRKQRKR 319
           ++ + E  G RTE V+ +  VP P A S++ RKR
Sbjct: 138 RLAKLEATGTRTEPVKTEQQVPTPAASSKRTRKR 171


>UniRef50_A7C413 Cluster: Transposase, IS630; n=3; Beggiatoa sp.
           PS|Rep: Transposase, IS630 - Beggiatoa sp. PS
          Length = 202

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +1

Query: 370 EFDTLRSPAKQLTTQHLKGSLLSNINLSVIRPIIVINIMFL 492
           EF+  +   K+LT QH  G +   + + ++ P+++ N MFL
Sbjct: 153 EFEAAQEELKELTKQHKDGDIELWVGILLMNPVLINNQMFL 193


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 498,102,003
Number of Sequences: 1657284
Number of extensions: 8890038
Number of successful extensions: 20327
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20325
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40820699206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)