Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10e07
(547 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44730| Best HMM Match : zf-C2H2 (HMM E-Value=0) 37 0.012
SB_57061| Best HMM Match : Sec62 (HMM E-Value=0.27) 34 0.066
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 33 0.15
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 32 0.35
SB_30783| Best HMM Match : RasGAP (HMM E-Value=3.2e-34) 31 0.61
SB_23024| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 30 1.1
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_27931| Best HMM Match : Filament (HMM E-Value=0.028) 30 1.1
SB_57319| Best HMM Match : Pox_A_type_inc (HMM E-Value=6.3e-06) 30 1.1
SB_15994| Best HMM Match : Pox_A_type_inc (HMM E-Value=2e-06) 30 1.1
SB_833| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_58880| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_20454| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_32432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_42035| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_7927| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
>SB_44730| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1346
Score = 36.7 bits (81), Expect = 0.012
Identities = 16/66 (24%), Positives = 36/66 (54%)
Frame = +2
Query: 209 VKRLAKYHFQVKAIIQDILECRESMEKLNELNEKGRAKITEVREELENLYLYGKETGDTK 388
V+ + K F++++I+Q+I C ++ L+ELN + + I ++ +++ + TG
Sbjct: 17 VRDIVKLEFEIQSIVQEIRGCDGPLKVLDELNSRAKRTIKSLKGKIQEKGSHSLNTGHIL 76
Query: 389 YDTELE 406
TE +
Sbjct: 77 LRTETD 82
>SB_57061| Best HMM Match : Sec62 (HMM E-Value=0.27)
Length = 243
Score = 34.3 bits (75), Expect = 0.066
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 254 QDILECRESMEKLNELNEKGRAKITEVREELENLYLYGKETGDTKYDTELESQR 415
+++ CR +EK E EK RA + ++ LE L KE D + ELE+ R
Sbjct: 183 EELAACRSELEKAKEEIEKARASYDKEKDRLEKLI---KEMTDELQEKELENDR 233
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 33.1 bits (72), Expect = 0.15
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Frame = +2
Query: 212 KRLAKYHFQVKAIIQDILECRESME-KLNELNEKGRAKITEVREELENLYLYGKETGDTK 388
KR + + + +++ EC+ E K N+L +AKI + EEL +L G ET +T
Sbjct: 135 KRNEDINHEFQKLLRQKEECKSLYEHKFNKLKSGAKAKINRLEEELVSLRSPGGET-ETP 193
Query: 389 YDTELESQRHLLACLLKEFKDANINSM---FAIEKAQREDLL 505
+ + + LL E KDA I S+ + + EDL+
Sbjct: 194 RPSGSPKKSFNIDKLLSE-KDAAIQSLTQQLQVSLKREEDLV 234
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 31.9 bits (69), Expect = 0.35
Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Frame = +2
Query: 224 KYHFQVKAIIQDIL---ECRESMEKLNELNEKGRAKITEVREELENLYLYGKETGDTKYD 394
K + +VK ++Q E ++ +E++ E+ EK K +R+ELE Y E + +
Sbjct: 822 KLYTRVKPLLQVARADEEMKQKVEQMKEIEEK-LGKEEALRKELEEKYTKLVEEKNLLFQ 880
Query: 395 TELESQRHLLACLLKEFKDANINSMFAIEKAQREDLLKCSDNEKSS 532
+ QR AC E ++A + A +AQ +D+L+ ++E+ +
Sbjct: 881 ---DFQREQDACADAEERNAELEGRKADLEAQVKDMLEQLEDEEEA 923
>SB_30783| Best HMM Match : RasGAP (HMM E-Value=3.2e-34)
Length = 912
Score = 31.1 bits (67), Expect = 0.61
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +2
Query: 206 FVKRLAKYHFQ--VKAIIQDILECRESMEKLNELNEKGRAKITEVREELENLYLYGKETG 379
++K +A + Q +K +I ILEC++S E EKG + +++ LE L+ +
Sbjct: 167 YMKMVAIPYLQHTIKDVILKILECKQSCELNPAKMEKGADTVVNLKQLLEFLF-EAIDAI 225
Query: 380 DTKYDTELESQRHLLACLLKEFKD 451
T + ++ R+L CL + K+
Sbjct: 226 FTSAEECPKTLRYLFGCLQQNVKN 249
>SB_23024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 593
Score = 30.7 bits (66), Expect = 0.81
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +2
Query: 233 FQVKAIIQDILECRESMEKLNELNEKGRAKITEVREELENL 355
+++ AI QD+ EC+ + LN+ NE + + + E ++ L
Sbjct: 401 YRIMAITQDLEECKGMVNALNKRNESDKDCVNNLMESVKGL 441
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +2
Query: 236 QVKAIIQDILECRESMEKLNELNEKGRAKITEVREELENLYLYGKETGDTKYDTE-LESQ 412
++KA+I+ + RE E L NE + ++ +R+E E + L E D K+D + LE Q
Sbjct: 2182 ELKAVIERL---REENENLENDNEMMKNELNSLRDEHERVSL---EFRDMKFDQQKLELQ 2235
Query: 413 RHLLACLLKEFKDAN 457
+ L ++ +D N
Sbjct: 2236 NNELEGTIRLLRDEN 2250
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 30.3 bits (65), Expect = 1.1
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 11/131 (8%)
Frame = +2
Query: 110 TTMALKMDLSPTDPYHQSLFAKLENPDVVYQNFVKRLAKYHFQVKAIIQDILECRESME- 286
T+ L+ DL ++ + L KLE + Q K++A+ + + IIQ + E+ +
Sbjct: 1661 TSEKLREDLRGSEKREEELKLKLEAGESNNQAIDKKIAELSAEKQEIIQTSAKAEEAFKI 1720
Query: 287 KLNEL-------NEKGRAKITEVREELENLYL---YGKETGDTKYDTELESQRHLLACLL 436
+++EL N+ +++ ++EL+N KET K +++ Q +
Sbjct: 1721 QIHELKSQFETTNQTYENELSAAKQELDNKIKELESEKETALEKMSEDMQKQSRSRVAEM 1780
Query: 437 KEFKDANINSM 469
K+ +A I+S+
Sbjct: 1781 KKKAEAKISSV 1791
>SB_27931| Best HMM Match : Filament (HMM E-Value=0.028)
Length = 428
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/75 (21%), Positives = 38/75 (50%)
Frame = +2
Query: 227 YHFQVKAIIQDILECRESMEKLNELNEKGRAKITEVREELENLYLYGKETGDTKYDTELE 406
Y ++KA+ + + C++ +E NE + + + ++ L+ + ET K + EL+
Sbjct: 129 YDREIKALEKKLSRCKQELENNNERRLEAESAVQRLKNSLDKASNFSNET-KVKVE-ELK 186
Query: 407 SQRHLLACLLKEFKD 451
+ + L+ + E K+
Sbjct: 187 NDKQKLSKKVNELKE 201
>SB_57319| Best HMM Match : Pox_A_type_inc (HMM E-Value=6.3e-06)
Length = 348
Score = 30.3 bits (65), Expect = 1.1
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Frame = +2
Query: 176 LENPDVVYQNFVKRLAKYHFQVKAIIQDILECRESMEKLNELNEKGRAKITEVREELENL 355
LE V+ + + KY Q+ + + +E R+++E+ L + +I ++RE+L +
Sbjct: 71 LEKGKVLLEIKNNEIEKYKQQITGLNEKEVELRKTIEQKEHLLQMAEKEIVKLREQLTSK 130
Query: 356 YLYGKETGDTKYDTELESQRHLLACLLKEFKDAN--INSMFAIEKAQREDLLKCSDNEK 526
YG + EL+ R+ L E D N +N+ K ++ + + + EK
Sbjct: 131 ADYGNIHAE-----ELQRIRNELEKCKNEISDLNSKLNTKSQKLKTYKKHIGELQEREK 184
>SB_15994| Best HMM Match : Pox_A_type_inc (HMM E-Value=2e-06)
Length = 364
Score = 30.3 bits (65), Expect = 1.1
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Frame = +2
Query: 176 LENPDVVYQNFVKRLAKYHFQVKAIIQDILECRESMEKLNELNEKGRAKITEVREELENL 355
LE V+ + + KY Q+ + + +E R+++E+ L + +I ++RE+L +
Sbjct: 71 LEKGKVLLEIKNNEIEKYKQQITGLNEKEVELRKTIEQKEHLLQMAEKEIVKLREQLTSK 130
Query: 356 YLYGKETGDTKYDTELESQRHLLACLLKEFKDAN--INSMFAIEKAQREDLLKCSDNEK 526
YG + EL+ R+ L E D N +N+ K ++ + + + EK
Sbjct: 131 ADYGNIHAE-----ELQRIRNELEKCKNEISDLNSKLNTKSQKLKTYKKHIGELQEREK 184
>SB_833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/98 (21%), Positives = 47/98 (47%)
Frame = +2
Query: 236 QVKAIIQDILECRESMEKLNELNEKGRAKITEVREELENLYLYGKETGDTKYDTELESQR 415
+ +++ + IL E + K E E+ K+ ++++ + KE D Y+ E + +
Sbjct: 44 EAESMQRRILLLSEELRKTEERLEEQEDKLADLKDRTDTHEEVRKELED--YEMEGDEKL 101
Query: 416 HLLACLLKEFKDANINSMFAIEKAQREDLLKCSDNEKS 529
L LKE + ++ + +AQR +++ D E++
Sbjct: 102 LDLEAKLKEVERQEKETLDKLHEAQRREVVLTKDYERA 139
>SB_58880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1098
Score = 28.3 bits (60), Expect = 4.3
Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 1/135 (0%)
Frame = +2
Query: 134 LSPTDPYHQSLFA-KLENPDVVYQNFVKRLAKYHFQVKAIIQDILECRESMEKLNELNEK 310
LSP Y ++ F K V +F KRL + QV +D + ME+ E ++
Sbjct: 770 LSPA--YKETPFCCKSRERTAVLDDF-KRLEEEATQVLKAYEDAQVHMKEMEEALEKTKQ 826
Query: 311 GRAKITEVREELENLYLYGKETGDTKYDTELESQRHLLACLLKEFKDANINSMFAIEKAQ 490
A I +L+N + K + KY+T + + + KE + + ++ Q
Sbjct: 827 EYAVIEAEEVQLKNKEVDLKHEVE-KYETVFKENQQKVRHWQKELSKLELQCVGISDEQQ 885
Query: 491 REDLLKCSDNEKSSV 535
+E+L K S + +V
Sbjct: 886 KEELPKLSTEDLEAV 900
>SB_20454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 693
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 241 DLKMILSQSLHEILIDHIRIF*FCKQRLMIW 149
D+ +I SL EIL HIR+ QR+ W
Sbjct: 150 DVDVIFPPSLSEILTSHIRLHETLSQRIQEW 180
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 27.9 bits (59), Expect = 5.7
Identities = 27/115 (23%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Frame = +2
Query: 209 VKRLAKYHFQVKAIIQDILECRESMEKLN--ELNEKGRAKITEVREELENLYLYGKETGD 382
+K L+K ++K + D+ E ++ L+ ++NE +ITE+ ELE KE +
Sbjct: 576 IKDLSK---KLKDVESDLAERDRQIQNLSLEKVNESRDDEITELENELEEQREIIKENEE 632
Query: 383 --TKYDTELESQRHLLACLLKEFKDANIN-SMFAIEKAQREDLLKCSDNEKSSVR 538
+ + E+E + + L + KD + + + A++E + C +E + R
Sbjct: 633 KLKEKEKEIEKLKKKIIELSDKLKDMETSRNKVETKLAEQEKTIACHKDEIKTAR 687
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 27.5 bits (58), Expect = 7.6
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 4/121 (3%)
Frame = +2
Query: 176 LENPDVVYQNFVKRLAKYHFQVKAIIQDILECRESMEKLNELNEKGRAKITEVREEL--- 346
L + ++V K AK Q+K + + + ++ M+K L K R +I ++++ L
Sbjct: 653 LIDKEIVISQLKKDEAKNKIQIKRLEDQLADNKKEMDKGLALVNKLRDEIADLKKRLAAA 712
Query: 347 -ENLYLYGKETGDTKYDTELESQRHLLACLLKEFKDANINSMFAIEKAQREDLLKCSDNE 523
+N L + K ++LE + L L+E ++I + RE K + E
Sbjct: 713 DDNDELMKQNESLRKKVSKLEDEVRFLNDELREADSSSIKDTEKLNAEIREFKKKIVELE 772
Query: 524 K 526
K
Sbjct: 773 K 773
>SB_32432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 112 HNGPQNGFESNGPISSIVVCKI 177
H GPQ+ + S+ ISS+ +CK+
Sbjct: 388 HGGPQSVYNSSYIISSVAMCKL 409
>SB_42035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -2
Query: 516 SLHFNKSSLC-AFSIANILFILASLNSLRRQAKRCLCDSNSVSYFVSPVSLPYRYKFSNS 340
+LH + LC + S+ L + +RR KR +C + +V P+S + S +
Sbjct: 280 ALHITATILCYSISLLYPLIYGIRVKGIRRDIKRMVCSTLCCIDYVRPISAAEAFLISPA 339
Query: 339 SR 334
+R
Sbjct: 340 AR 341
>SB_7927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 555
Score = 27.5 bits (58), Expect = 7.6
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Frame = +2
Query: 173 KLENPDVVYQNFV-KRLAKYHFQVKAIIQDILECRESMEKLNELNEKGRAKITEVREELE 349
K E DV+ + F+ K +A Y I DI++ E +EK EL E +E EEL+
Sbjct: 338 KEEKGDVIPEIFLGKNIADY------IDPDIMKKLEELEKEEELREAAGVYESESEEELD 391
Query: 350 NLYLYGKETGDTKYDTELESQRHLLACLLKEFKDAN 457
+ G+E + E+ +R L+ +E K N
Sbjct: 392 S---EGEEIKNKA--AEIREKRKLIVKQHRESKGTN 422
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,328,210
Number of Sequences: 59808
Number of extensions: 255520
Number of successful extensions: 736
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1252112599
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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