Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10e07
(547 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g19980.1 68414.m02503 cytomatrix protein-related contains wea... 33 0.16
At2g34730.1 68415.m04265 myosin heavy chain-related low similari... 31 0.50
At5g65930.2 68418.m08300 kinesin-like calmodulin-binding protein... 30 0.88
At5g65930.1 68418.m08299 kinesin-like calmodulin-binding protein... 30 0.88
At5g49470.2 68418.m06121 protein kinase family protein contains ... 29 2.0
At1g04890.1 68414.m00486 hypothetical protein contains Pfam prof... 29 2.7
At4g00640.1 68417.m00088 hypothetical protein 28 3.5
At1g22260.1 68414.m02782 expressed protein 28 4.7
At5g07660.1 68418.m00877 structural maintenance of chromosomes (... 27 6.2
At4g18230.1 68417.m02708 expressed protein predicted gene M02B7.... 27 6.2
At1g80790.1 68414.m09479 XH/XS domain-containing protein / XS zi... 27 6.2
At1g77580.2 68414.m09032 myosin heavy chain-related low similari... 27 6.2
At1g77580.1 68414.m09033 myosin heavy chain-related low similari... 27 6.2
At1g66940.2 68414.m07609 protein kinase-related 27 8.2
At1g66940.1 68414.m07608 protein kinase-related 27 8.2
At1g50660.1 68414.m05696 expressed protein similar to liver stag... 27 8.2
At1g22275.1 68414.m02784 expressed protein 27 8.2
>At1g19980.1 68414.m02503 cytomatrix protein-related contains weak
similarity to CAST1 [Rattus norvegicus]
gi|22138113|gb|AAL07517
Length = 342
Score = 32.7 bits (71), Expect = 0.16
Identities = 26/94 (27%), Positives = 50/94 (53%)
Frame = +2
Query: 179 ENPDVVYQNFVKRLAKYHFQVKAIIQDILECRESMEKLNELNEKGRAKITEVREELENLY 358
EN + ++++ VK L Q++++++D ++ +E +E+ +++VR + L
Sbjct: 14 ENWETIFKSLVKILQTKQDQLESLLKD----KKILE--SEIKTNNENWLSDVRNYEDQLS 67
Query: 359 LYGKETGDTKYDTELESQRHLLACLLKEFKDANI 460
L KE TK LE+ + L C LKE KD ++
Sbjct: 68 LMMKEIETTKMFQLLETYKSNLLCGLKE-KDRSL 100
>At2g34730.1 68415.m04265 myosin heavy chain-related low similarity
to SP|P14105 Myosin heavy chain, nonmuscle (Cellular
myosin heavy chain) {Gallus gallus}
Length = 825
Score = 31.1 bits (67), Expect = 0.50
Identities = 14/61 (22%), Positives = 34/61 (55%)
Frame = +2
Query: 173 KLENPDVVYQNFVKRLAKYHFQVKAIIQDILECRESMEKLNELNEKGRAKITEVREELEN 352
K+E VV ++++ Y ++ ++ +++ RES++++ + K K++E + E E
Sbjct: 632 KIEALSVVSARELEKVKGYETKISSLREELELARESLKEMKDEKRKTEEKLSETKAEKET 691
Query: 353 L 355
L
Sbjct: 692 L 692
>At5g65930.2 68418.m08300 kinesin-like calmodulin-binding protein
(ZWICHEL) identical to kinesin-like protein GI:2224925
from [Arabidopsis thaliana]
Length = 1260
Score = 30.3 bits (65), Expect = 0.88
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Frame = +2
Query: 176 LENPDVVYQNFVKRLAKYHFQVKAIIQDILECRESMEKL-NELNEKGRAKITEVREELEN 352
L N D+ + + Y +++ + + E ++ +EKL +E EK + ++T +REELE
Sbjct: 603 LVNGDISCSSKPQNFEVYEKRLQDLSKAYEESQKKIEKLMDEQQEKNQQEVT-LREELEA 661
Query: 353 LYLYGKETGDTKYDTELESQRHLLACLLKEFKDANINSMFAIEKAQREDLLKCSDNEKSS 532
++ G E K E+ R L L E K I S+ + + L K S N KSS
Sbjct: 662 IH-NGLELERRKL-LEVTLDRDKLRSLCDE-KGTTIQSLMSELRGMEARLAK-SGNTKSS 717
>At5g65930.1 68418.m08299 kinesin-like calmodulin-binding protein
(ZWICHEL) identical to kinesin-like protein GI:2224925
from [Arabidopsis thaliana]
Length = 1259
Score = 30.3 bits (65), Expect = 0.88
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Frame = +2
Query: 176 LENPDVVYQNFVKRLAKYHFQVKAIIQDILECRESMEKL-NELNEKGRAKITEVREELEN 352
L N D+ + + Y +++ + + E ++ +EKL +E EK + ++T +REELE
Sbjct: 602 LVNGDISCSSKPQNFEVYEKRLQDLSKAYEESQKKIEKLMDEQQEKNQQEVT-LREELEA 660
Query: 353 LYLYGKETGDTKYDTELESQRHLLACLLKEFKDANINSMFAIEKAQREDLLKCSDNEKSS 532
++ G E K E+ R L L E K I S+ + + L K S N KSS
Sbjct: 661 IH-NGLELERRKL-LEVTLDRDKLRSLCDE-KGTTIQSLMSELRGMEARLAK-SGNTKSS 716
>At5g49470.2 68418.m06121 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 834
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/46 (23%), Positives = 27/46 (58%)
Frame = -1
Query: 142 WTQIHFEGHCGVFSILSLKFILIYKLNIT*SYLFLESLRIHKLHYC 5
W +I + + + S++ L +++ L+I +Y F ++ ++ LH+C
Sbjct: 625 WPRIFYLAYYSLDSLIQLLYLVYNMLHIFLTYFFAQARGMNYLHHC 670
>At1g04890.1 68414.m00486 hypothetical protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 494
Score = 28.7 bits (61), Expect = 2.7
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Frame = +2
Query: 197 YQNFVKRLAKYHFQVKAIIQDILECRESMEKLNELNEKGRAKITEVREELENLYLYGKET 376
+Q V+ + + + I++DIL RE + E + ++ E EELE + K
Sbjct: 253 FQRLVEERSTFDAEEMVILKDILIRREREKHFLEKEVEAYRQLLEETEELECSLIKEKNV 312
Query: 377 GDTKYDTELESQRHLLACLLKEFKDANINSMFAIEKAQRE---DLLKCSDNE 523
+ ++ + Q A L++E D + M E+ R+ DL K SD+E
Sbjct: 313 PEPEHKQNKDCQER-RALLVQEL-DGTVLDMPYREEGNRDKNRDLYK-SDSE 361
>At4g00640.1 68417.m00088 hypothetical protein
Length = 425
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +2
Query: 368 KETGDTKYDTELESQRHLLACLLKEFKDANINSMFAIEKAQR 493
K+T + LE R LL KE + A++NS EKAQR
Sbjct: 132 KDTREQDSAPSLEELRDLLNKATKELEVASLNSTMFEEKAQR 173
>At1g22260.1 68414.m02782 expressed protein
Length = 857
Score = 27.9 bits (59), Expect = 4.7
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Frame = +2
Query: 218 LAKYHFQVKAIIQD----ILECRESMEKLNELNEKGRAKITEVREELENLYLYGKETGDT 385
LAK Q++ +I++ IL+C E+ ++LN+ K + + +L
Sbjct: 484 LAKEVNQLQTVIEEKGHVILQCNENEKQLNQQIIKDKELLATAETKLAE--------AKK 535
Query: 386 KYDTELESQRHLLACLLKEFKDANINSMFAIEKAQREDLLKCSDNEKSSV 535
+YD LES++ L+ LKE N ++ I + + + ++EK V
Sbjct: 536 QYDLMLESKQLELSRHLKELSQRNDQAINEIRRKYDVEKHEIINSEKDKV 585
>At5g07660.1 68418.m00877 structural maintenance of chromosomes
(SMC) family protein similar to SMC-like protein (MIM)
[Arabidopsis thaliana] GI:5880614; contains Pfam profile
PF02463: RecF/RecN/SMC N terminal domain
Length = 1058
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 230 HFQVKAIIQDILECRESMEKLNELNEKGRAKITEVREELENLY 358
H ++ ++I E +EKL + ++ K E++ ENLY
Sbjct: 720 HLEIMKFQKEIEEKESLLEKLQDSLKEAELKANELKASYENLY 762
>At4g18230.1 68417.m02708 expressed protein predicted gene M02B7.4,
Caenorhabditis elegans, PID:G1572781
Length = 233
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -1
Query: 157 MIWVRWTQIHFEGHCGVFSILSLKFILIYKLNIT*SYLFLESLRIHK 17
++ +RW+ I + LSL +L+YKL I F++ ++HK
Sbjct: 176 VLGIRWSSIFYVESVARVKKLSLSGLLLYKLRIA-DQFFVQWPQLHK 221
>At1g80790.1 68414.m09479 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 634
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 278 SMEKLNELNEKGRAKITEVREELENLYLYGKETGDTKYDTELESQR 415
S EK+N + + E+ ++ NL ++ K+ + TELE Q+
Sbjct: 309 SREKINRIFREKERLTNELEAKMNNLKIWSKQLDKKQALTELERQK 354
>At1g77580.2 68414.m09032 myosin heavy chain-related low similarity
to SP|P08799 Myosin II heavy chain, non muscle
{Dictyostelium discoideum}
Length = 779
Score = 27.5 bits (58), Expect = 6.2
Identities = 18/84 (21%), Positives = 41/84 (48%)
Frame = +2
Query: 287 KLNELNEKGRAKITEVREELENLYLYGKETGDTKYDTELESQRHLLACLLKEFKDANINS 466
+ EL E+ K+ + ELE+ +E + + L ++ +L C +K+ ++
Sbjct: 440 RTKELEEQ-LEKLEAEKVELESEVKCNREEAVAQVENSLATEIEVLTCRIKQLEEK--LE 496
Query: 467 MFAIEKAQREDLLKCSDNEKSSVR 538
+EK + + +KC+ +S++R
Sbjct: 497 KLEVEKDELKSEVKCNREVESTLR 520
>At1g77580.1 68414.m09033 myosin heavy chain-related low similarity
to SP|P08799 Myosin II heavy chain, non muscle
{Dictyostelium discoideum}
Length = 629
Score = 27.5 bits (58), Expect = 6.2
Identities = 18/84 (21%), Positives = 41/84 (48%)
Frame = +2
Query: 287 KLNELNEKGRAKITEVREELENLYLYGKETGDTKYDTELESQRHLLACLLKEFKDANINS 466
+ EL E+ K+ + ELE+ +E + + L ++ +L C +K+ ++
Sbjct: 406 RTKELEEQ-LEKLEAEKVELESEVKCNREEAVAQVENSLATEIEVLTCRIKQLEEK--LE 462
Query: 467 MFAIEKAQREDLLKCSDNEKSSVR 538
+EK + + +KC+ +S++R
Sbjct: 463 KLEVEKDELKSEVKCNREVESTLR 486
>At1g66940.2 68414.m07609 protein kinase-related
Length = 309
Score = 27.1 bits (57), Expect = 8.2
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = -2
Query: 522 SLSLHFNKSSLCAFSIAN----ILFILASLNSLRRQAKRCLCDSNSVSYFVSPVSLPYRY 355
SL LH NK+++ + I+N +L I + N+L AK+ L S S F + P +
Sbjct: 61 SLELHCNKNNITSLFISNQKYSVLRIDQTSNTL-TLAKQNLLGSFCSSVFTNTTLPPETF 119
Query: 354 KFSNSSRTSVIF 319
+ S + ++ IF
Sbjct: 120 ELSRTYKSVTIF 131
>At1g66940.1 68414.m07608 protein kinase-related
Length = 332
Score = 27.1 bits (57), Expect = 8.2
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = -2
Query: 522 SLSLHFNKSSLCAFSIAN----ILFILASLNSLRRQAKRCLCDSNSVSYFVSPVSLPYRY 355
SL LH NK+++ + I+N +L I + N+L AK+ L S S F + P +
Sbjct: 61 SLELHCNKNNITSLFISNQKYSVLRIDQTSNTL-TLAKQNLLGSFCSSVFTNTTLPPETF 119
Query: 354 KFSNSSRTSVIF 319
+ S + ++ IF
Sbjct: 120 ELSRTYKSVTIF 131
>At1g50660.1 68414.m05696 expressed protein similar to liver stage
antigen-1 (GI:510184) [Plasmodium falciparum]; similar
to Myosin II heavy chain, non muscle (Swiss-Prot:P08799)
[Dictyostelium discoideum]; similar to liver stage
antigen (GI:9916) [Plasmodium falciparum]; similar to
Kinesin-like protein KLPA (Swiss-Prot:P28739)
[Emericella nidulans]
Length = 725
Score = 27.1 bits (57), Expect = 8.2
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 188 DVVYQNFVKRLAKYHFQVKAIIQDILECRESMEKLNELNEKGRAKITEVREELENL 355
++V V LA VK +QD + R++ E + E+ ++ +I E + E+E L
Sbjct: 311 EIVNHKLVNELADSKLAVKRYMQDYEKERKARELIEEVCDELAKEIGEDKAEIEAL 366
>At1g22275.1 68414.m02784 expressed protein
Length = 856
Score = 27.1 bits (57), Expect = 8.2
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
Frame = +2
Query: 218 LAKYHFQVKAIIQD----ILECRESMEKLNELNEKGRAKITEVREELENLYLYGKETGDT 385
LAK Q++ II++ IL+C E+ + +N+ K + + +L
Sbjct: 484 LAKEVNQLQTIIEEKGHLILQCNENEKNINQQIIKDKELLATAETKLAE--------AKK 535
Query: 386 KYDTELESQRHLLACLLKEFKDANINSMFAIEKAQREDLLKCSDNEKSSV 535
+YD LES++ L+ LKE N ++ I + + + ++EK V
Sbjct: 536 QYDLMLESKQLELSRHLKELSQRNDQAINEIRRKYDVEKHEIINSEKDKV 585
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,185,607
Number of Sequences: 28952
Number of extensions: 185703
Number of successful extensions: 542
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1023490624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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