Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10e06
         (637 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.40 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   2.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.6  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   8.6  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   8.6  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   8.6  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 25.4 bits (53), Expect = 0.40
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
 Frame = -1

Query: 571 AALNNVDILTSNGFADFNVGFFV--TELLSGGPAQV*T*PCDDSF-RDVWMRASSKHFY 404
           +ALN   + T NG   FN+  F+    LL+  P  V T     SF R  W+  +   FY
Sbjct: 258 SALNGAFLYTINGQGQFNIEMFLCNMSLLTVIPIHVWTSKEKISFLRGFWLSPAVDMFY 316



 Score = 21.0 bits (42), Expect = 8.6
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 111 RDLLLNVKKFIFKLNKHNLHELYKIIT*YR 22
           R +LLN K    K +    HEL K+   YR
Sbjct: 591 RYVLLNEKVEAIKTSPKMRHELQKLAQVYR 620


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -2

Query: 621 AFIIMKSSIKLSFISPQPL*TM*TSSPLTDSPISTLVSLL 502
           A I+M  +    FI  Q   T    SP  D P+  +++LL
Sbjct: 268 AVIVMYIACSTPFILAQLWATWDPQSPFIDGPVFVILTLL 307


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = -1

Query: 181 YCYLSLFVEVNNSVLFKV 128
           +C++   VEV  +++FK+
Sbjct: 603 HCHIEFHVEVGMALVFKI 620


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 83  LSLNLINITYTNFT 42
           LSLN +N   TNFT
Sbjct: 248 LSLNCLNTGRTNFT 261


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
          protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 83 LSLNLINITYTNFT 42
          LSLN +N   TNFT
Sbjct: 37 LSLNCLNTGRTNFT 50


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
          protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 83 LSLNLINITYTNFT 42
          LSLN +N   TNFT
Sbjct: 37 LSLNCLNTGRTNFT 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,096
Number of Sequences: 336
Number of extensions: 2626
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)