Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10e06
         (637 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00036-6|AAK29853.1|  377|Caenorhabditis elegans Hypothetical pr...   135   2e-32
U00036-5|AAT92064.1|  446|Caenorhabditis elegans Hypothetical pr...   135   2e-32
U00036-7|AAK29858.2|  319|Caenorhabditis elegans Hypothetical pr...   133   9e-32
U00036-8|AAL06052.1|  318|Caenorhabditis elegans Hypothetical pr...   122   2e-28
Z68014-5|CAA92027.1|  353|Caenorhabditis elegans Hypothetical pr...    81   7e-16
U41748-2|AAM51524.1|  639|Caenorhabditis elegans Hypothetical pr...    30   1.6  
U41748-1|AAA83335.3|  696|Caenorhabditis elegans Hypothetical pr...    30   1.6  
U28732-6|AAB04903.2|  489|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U28732-5|AAT92075.1|  495|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z81124-6|CAB03375.1|  335|Caenorhabditis elegans Hypothetical pr...    28   6.4  
U39651-7|AAA80398.2|  494|Caenorhabditis elegans Hypothetical pr...    27   8.5  
AL021497-16|CAD27618.1| 1131|Caenorhabditis elegans Hypothetical...    27   8.5  
AF431893-1|AAL28104.1| 1131|Caenorhabditis elegans large-conduct...    27   8.5  
AF039051-7|AAB94267.2|  304|Caenorhabditis elegans Serpentine re...    27   8.5  

>U00036-6|AAK29853.1|  377|Caenorhabditis elegans Hypothetical
           protein R151.2a protein.
          Length = 377

 Score =  135 bits (327), Expect = 2e-32
 Identities = 64/82 (78%), Positives = 71/82 (86%)
 Frame = +2

Query: 392 RMPNIKVFTGSSHPDIAKTIVARLGLNLGRATTKKFSNKETNVEIGESVRGEDVYIVQSG 571
           RMPNIKVF+GSSHPD++  I  RL L + +A+ KKFSNKETNVEIGESVRGEDVYI+QS 
Sbjct: 58  RMPNIKVFSGSSHPDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSA 117

Query: 572 CGEINDNLMELFIMINACKIAS 637
            GEINDNLMEL IMINACKIAS
Sbjct: 118 AGEINDNLMELLIMINACKIAS 139


>U00036-5|AAT92064.1|  446|Caenorhabditis elegans Hypothetical
           protein R151.2d protein.
          Length = 446

 Score =  135 bits (327), Expect = 2e-32
 Identities = 64/82 (78%), Positives = 71/82 (86%)
 Frame = +2

Query: 392 RMPNIKVFTGSSHPDIAKTIVARLGLNLGRATTKKFSNKETNVEIGESVRGEDVYIVQSG 571
           RMPNIKVF+GSSHPD++  I  RL L + +A+ KKFSNKETNVEIGESVRGEDVYI+QS 
Sbjct: 127 RMPNIKVFSGSSHPDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSA 186

Query: 572 CGEINDNLMELFIMINACKIAS 637
            GEINDNLMEL IMINACKIAS
Sbjct: 187 AGEINDNLMELLIMINACKIAS 208


>U00036-7|AAK29858.2|  319|Caenorhabditis elegans Hypothetical
           protein R151.2b protein.
          Length = 319

 Score =  133 bits (322), Expect = 9e-32
 Identities = 63/81 (77%), Positives = 70/81 (86%)
 Frame = +2

Query: 395 MPNIKVFTGSSHPDIAKTIVARLGLNLGRATTKKFSNKETNVEIGESVRGEDVYIVQSGC 574
           MPNIKVF+GSSHPD++  I  RL L + +A+ KKFSNKETNVEIGESVRGEDVYI+QS  
Sbjct: 1   MPNIKVFSGSSHPDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSAA 60

Query: 575 GEINDNLMELFIMINACKIAS 637
           GEINDNLMEL IMINACKIAS
Sbjct: 61  GEINDNLMELLIMINACKIAS 81


>U00036-8|AAL06052.1|  318|Caenorhabditis elegans Hypothetical
           protein R151.2c protein.
          Length = 318

 Score =  122 bits (295), Expect = 2e-28
 Identities = 58/76 (76%), Positives = 65/76 (85%)
 Frame = +2

Query: 410 VFTGSSHPDIAKTIVARLGLNLGRATTKKFSNKETNVEIGESVRGEDVYIVQSGCGEIND 589
           VF+GSSHPD++  I  RL L + +A+ KKFSNKETNVEIGESVRGEDVYI+QS  GEIND
Sbjct: 5   VFSGSSHPDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSAAGEIND 64

Query: 590 NLMELFIMINACKIAS 637
           NLMEL IMINACKIAS
Sbjct: 65  NLMELLIMINACKIAS 80


>Z68014-5|CAA92027.1|  353|Caenorhabditis elegans Hypothetical
           protein W04G3.5 protein.
          Length = 353

 Score = 81.0 bits (191), Expect = 7e-16
 Identities = 35/73 (47%), Positives = 55/73 (75%)
 Frame = +2

Query: 410 VFTGSSHPDIAKTIVARLGLNLGRATTKKFSNKETNVEIGESVRGEDVYIVQSGCGEIND 589
           + TG+SHP++AK +  RL + LG AT    +N+ET+V+I +SVRG+ V+I+QSG   +N+
Sbjct: 13  LLTGNSHPELAKMVSERLEIRLGEATVYNKTNRETSVDIKQSVRGKHVFILQSGSKNVNN 72

Query: 590 NLMELFIMINACK 628
           ++MEL ++I ACK
Sbjct: 73  DVMELLVLIYACK 85


>U41748-2|AAM51524.1|  639|Caenorhabditis elegans Hypothetical
           protein C31H2.1b protein.
          Length = 639

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = -2

Query: 240 INYLGSRRGHLVTYPLQWKCTV-TYLCLLK 154
           INYL + +G+L+T P+QW  +  T L L+K
Sbjct: 267 INYLLNTKGYLMTAPVQWAASSHTILALVK 296


>U41748-1|AAA83335.3|  696|Caenorhabditis elegans Hypothetical
           protein C31H2.1a protein.
          Length = 696

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = -2

Query: 240 INYLGSRRGHLVTYPLQWKCTV-TYLCLLK 154
           INYL + +G+L+T P+QW  +  T L L+K
Sbjct: 324 INYLLNTKGYLMTAPVQWAASSHTILALVK 353


>U28732-6|AAB04903.2|  489|Caenorhabditis elegans Hypothetical
           protein F45E1.7a protein.
          Length = 489

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +2

Query: 347 KEINKEEKHFNNPSARMPNIKVFTGSSHPDIAKT 448
           ++IN+ E   +  S  +P++ V T SSH D+ K+
Sbjct: 324 RQINRSEDIPSTHSNTLPSVAVNTASSHEDVGKS 357


>U28732-5|AAT92075.1|  495|Caenorhabditis elegans Hypothetical
           protein F45E1.7b protein.
          Length = 495

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +2

Query: 347 KEINKEEKHFNNPSARMPNIKVFTGSSHPDIAKT 448
           ++IN+ E   +  S  +P++ V T SSH D+ K+
Sbjct: 330 RQINRSEDIPSTHSNTLPSVAVNTASSHEDVGKS 363


>Z81124-6|CAB03375.1|  335|Caenorhabditis elegans Hypothetical
           protein T21B4.8 protein.
          Length = 335

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = -2

Query: 369 FSSLLISFTCFSSNCIYIVYDEAVTSLVRSQLRVKLRYILIITINYL 229
           FS  +   T FS+ CIY +     T +  +  + +LR    ITI  L
Sbjct: 213 FSIAIFEMTFFSACCIYYLVFSTTTQISSTTRKFQLRSFWAITIQTL 259


>U39651-7|AAA80398.2|  494|Caenorhabditis elegans Hypothetical
           protein ZK470.1 protein.
          Length = 494

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 20/65 (30%), Positives = 34/65 (52%)
 Frame = -2

Query: 423 LPVNTFMFGILALGLLKCFSSLLISFTCFSSNCIYIVYDEAVTSLVRSQLRVKLRYILII 244
           LP  +F++  LAL LL    S L+   C       + YD    S+  S+  V++ Y+++I
Sbjct: 354 LPFESFIYARLALLLLPSAISFLLLSVCLVIKKERLNYDPGF-SISLSKALVRVLYVVVI 412

Query: 243 TINYL 229
            I++L
Sbjct: 413 -IDFL 416


>AL021497-16|CAD27618.1| 1131|Caenorhabditis elegans Hypothetical
           protein Y51A2D.19c protein.
          Length = 1131

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +2

Query: 413 FTGSSHPDIAKTIVARLGLNLGRATTKKFSNKETNVEI 526
           F   S P+ A  +  RLGL L     K   NKE N+ I
Sbjct: 575 FANMSFPEAANLLFNRLGLLLLAIELKDEENKECNIAI 612


>AF431893-1|AAL28104.1| 1131|Caenorhabditis elegans
           large-conductance calcium-activatedpotassium channel
           SLO-1c protein.
          Length = 1131

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +2

Query: 413 FTGSSHPDIAKTIVARLGLNLGRATTKKFSNKETNVEI 526
           F   S P+ A  +  RLGL L     K   NKE N+ I
Sbjct: 575 FANMSFPEAANLLFNRLGLLLLAIELKDEENKECNIAI 612


>AF039051-7|AAB94267.2|  304|Caenorhabditis elegans Serpentine
           receptor, class x protein8 protein.
          Length = 304

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = -1

Query: 295 FVGQISIKS*ITLYSYNNNKLSRFAEGSLSYVSPAMEVYCYLSLFVEVNNS 143
           FVG ISI S + +   N    S+    S       +   CY S+F+ + N+
Sbjct: 151 FVGDISIMSYMAVTIPNVYSYSKLIILSFDLFCTGISTVCYASVFITIRNA 201


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,655,472
Number of Sequences: 27780
Number of extensions: 235298
Number of successful extensions: 666
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)