Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10e03
(553 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 236 8e-63
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 236 8e-63
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 155 2e-38
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 155 2e-38
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 154 4e-38
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 154 4e-38
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 154 4e-38
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 153 6e-38
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 153 6e-38
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 153 6e-38
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 153 6e-38
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 153 6e-38
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 153 6e-38
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 153 6e-38
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 153 6e-38
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 153 6e-38
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 152 1e-37
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 152 1e-37
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 152 1e-37
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 152 1e-37
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 152 1e-37
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 151 4e-37
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 140 7e-34
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 116 1e-26
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 95 2e-20
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 69 2e-12
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 69 2e-12
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 64 6e-11
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 59 2e-09
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 59 2e-09
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 54 5e-08
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 53 1e-07
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 51 4e-07
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 51 4e-07
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 51 6e-07
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 51 6e-07
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 51 6e-07
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 50 1e-06
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 50 1e-06
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 49 2e-06
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 48 4e-06
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 47 7e-06
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 47 7e-06
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 47 7e-06
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 46 2e-05
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 46 2e-05
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 46 2e-05
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 46 2e-05
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 46 2e-05
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 46 2e-05
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 46 2e-05
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 44 7e-05
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 40 8e-04
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 40 8e-04
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 40 8e-04
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 40 0.001
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 39 0.003
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 37 0.008
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 37 0.008
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 37 0.008
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 36 0.014
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 35 0.031
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 34 0.055
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 33 0.13
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 30 0.89
At1g47680.1 68414.m05297 hypothetical protein 29 2.7
At4g38340.1 68417.m05420 RWP-RK domain-containing protein simila... 28 4.8
At4g16070.1 68417.m02437 lipase class 3 family protein low simil... 27 6.3
At3g47160.1 68416.m05120 expressed protein similar to MTD2 [Medi... 27 6.3
At3g46530.1 68416.m05051 disease resistance protein, RPP13-like ... 27 6.3
At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding protei... 27 6.3
At2g19180.1 68415.m02238 expressed protein 27 6.3
At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR ... 27 6.3
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 27 8.3
At1g74750.1 68414.m08661 pentatricopeptide (PPR) repeat-containi... 27 8.3
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 236 bits (577), Expect = 8e-63
Identities = 110/123 (89%), Positives = 116/123 (94%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 252 IQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNN 431
IQKESTLHLVLRLRGG IEPSL +LA KYN +KMICRKCYARLHPRA NCRK KCGH+N
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120
Query: 432 LRP 440
LRP
Sbjct: 121 LRP 123
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 236 bits (577), Expect = 8e-63
Identities = 110/123 (89%), Positives = 116/123 (94%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 252 IQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNN 431
IQKESTLHLVLRLRGG IEPSL +LA KYN +KMICRKCYARLHPRA NCRK KCGH+N
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120
Query: 432 LRP 440
LRP
Sbjct: 121 LRP 123
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 155 bits (375), Expect = 2e-38
Identities = 74/78 (94%), Positives = 78/78 (100%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 252 IQKESTLHLVLRLRGGTI 305
IQKESTLHLVLRLRGGT+
Sbjct: 61 IQKESTLHLVLRLRGGTM 78
Score = 99.5 bits (237), Expect = 1e-21
Identities = 48/92 (52%), Positives = 65/92 (70%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ I VKTLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI+A
Sbjct: 63 KESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYA 122
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGGTI 305
GKQL D +T DY I+ S LHLVL LRGG +
Sbjct: 123 GKQLADDKTAKDYAIEGGSVLHLVLALRGGLL 154
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 155 bits (375), Expect = 2e-38
Identities = 74/78 (94%), Positives = 78/78 (100%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 252 IQKESTLHLVLRLRGGTI 305
IQKESTLHLVLRLRGGT+
Sbjct: 61 IQKESTLHLVLRLRGGTM 78
Score = 102 bits (244), Expect = 2e-22
Identities = 49/90 (54%), Positives = 65/90 (72%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ I VKTLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI+A
Sbjct: 63 KESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYA 122
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQL D +T DYNI+ S LHLVL LRGG
Sbjct: 123 GKQLADDKTAKDYNIEGGSVLHLVLALRGG 152
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 154 bits (373), Expect = 4e-38
Identities = 76/91 (83%), Positives = 83/91 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 350
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGGT 302
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG+
Sbjct: 351 GKQLEDGRTLADYNIQKESTLHLVLRLRGGS 381
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 274
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 154 bits (373), Expect = 4e-38
Identities = 76/91 (83%), Positives = 83/91 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 274
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGGT 302
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG+
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLVLRLRGGS 305
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 154 bits (373), Expect = 4e-38
Identities = 76/91 (83%), Positives = 83/91 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 274
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGGT 302
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG+
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLVLRLRGGS 305
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 68.5 bits (160), Expect = 3e-12
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 173
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
Score = 32.7 bits (71), Expect = 0.17
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 175 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 279
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 263 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 297
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 274
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 350
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 351 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 68.5 bits (160), Expect = 3e-12
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 173
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 367 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 32.7 bits (71), Expect = 0.17
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 175 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 279
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 415 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 449
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 274
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 68.5 bits (160), Expect = 3e-12
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 173
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 32.7 bits (71), Expect = 0.17
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 175 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 279
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 339 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 373
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 274
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 350
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 351 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 68.5 bits (160), Expect = 3e-12
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 173
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 367 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 32.7 bits (71), Expect = 0.17
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 175 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 279
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 415 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 449
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 274
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 68.5 bits (160), Expect = 3e-12
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 173
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 32.7 bits (71), Expect = 0.17
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 175 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 279
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 339 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 373
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 274
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 153 bits (372), Expect = 6e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 274
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 150 bits (364), Expect = 5e-37
Identities = 75/90 (83%), Positives = 81/90 (90%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE IPPDQQRLIFA
Sbjct: 138 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFA 197
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 198 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 227
Score = 146 bits (354), Expect = 9e-36
Identities = 75/90 (83%), Positives = 81/90 (90%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+D NIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLAD-NIQKESTLHLVLRLRGG 151
Score = 103 bits (246), Expect = 1e-22
Identities = 52/67 (77%), Positives = 57/67 (85%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+S TI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 214 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFA 273
Query: 210 GKQLEDG 230
GKQLE G
Sbjct: 274 GKQLEGG 280
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 152 bits (369), Expect = 1e-37
Identities = 73/80 (91%), Positives = 77/80 (96%)
Frame = +3
Query: 60 FSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 239
F MQIFVKTLTGKTITLEVE+SDTI+N+KAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 FRGGMQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 240 SDYNIQKESTLHLVLRLRGG 299
+DYNIQKESTLHLVLRLRGG
Sbjct: 133 ADYNIQKESTLHLVLRLRGG 152
Score = 148 bits (358), Expect = 3e-36
Identities = 74/91 (81%), Positives = 81/91 (89%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGI PDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFA 198
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGGT 302
GKQ EDGRTL+DYNIQKESTLHLVLRLRGG+
Sbjct: 199 GKQHEDGRTLADYNIQKESTLHLVLRLRGGS 229
Score = 135 bits (326), Expect = 2e-32
Identities = 63/76 (82%), Positives = 71/76 (93%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
MQIF+KTLTGKT LEVE+SDTI+NVKAKIQD EGIPPDQ RLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 252 IQKESTLHLVLRLRGG 299
+Q++STLHL+LR RGG
Sbjct: 61 VQEDSTLHLLLRFRGG 76
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 151 bits (365), Expect = 4e-37
Identities = 71/76 (93%), Positives = 76/76 (100%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEG+PPDQQRLIFAGKQL+DGRTL+DYN
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 252 IQKESTLHLVLRLRGG 299
IQKESTLHLVLRLRGG
Sbjct: 139 IQKESTLHLVLRLRGG 154
Score = 142 bits (343), Expect = 2e-34
Identities = 71/90 (78%), Positives = 78/90 (86%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFV+TLT KTI LEVE+SDT +NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 141 KESTLHLVLRLRGGMQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFA 200
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRL GG
Sbjct: 201 GKQLEDGRTLADYNIQKESTLHLVLRLCGG 230
Score = 136 bits (329), Expect = 9e-33
Identities = 71/91 (78%), Positives = 78/91 (85%), Gaps = 1/91 (1%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKE I PDQQRLIFA
Sbjct: 217 KESTLHLVLRLCGGMQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFA 276
Query: 210 GKQLEDG-RTLSDYNIQKESTLHLVLRLRGG 299
G+QLEDG TL+DYNIQKESTLHLVLRLRGG
Sbjct: 277 GEQLEDGYYTLADYNIQKESTLHLVLRLRGG 307
Score = 120 bits (288), Expect = 9e-28
Identities = 58/77 (75%), Positives = 67/77 (87%)
Frame = +3
Query: 69 TMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 248
+MQI KTLT KTIT++V +SDTI NVKAKIQD EGIP DQQRLIF+GK L+DGRTL+DY
Sbjct: 2 SMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADY 61
Query: 249 NIQKESTLHLVLRLRGG 299
+IQK+S LHL LRLRGG
Sbjct: 62 SIQKDSILHLALRLRGG 78
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 140 bits (338), Expect = 7e-34
Identities = 71/90 (78%), Positives = 79/90 (87%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
K+S + V+ MQIFV+TLTGKTITLEV++SDTI+NVKAKIQDKEGI P QQRLIFA
Sbjct: 65 KESTLHLVLRLRGGMQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFA 124
Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
GKQLEDGRTL+DYNIQKESTLHLVLRL GG
Sbjct: 125 GKQLEDGRTLADYNIQKESTLHLVLRLCGG 154
Score = 134 bits (323), Expect = 5e-32
Identities = 65/77 (84%), Positives = 71/77 (92%)
Frame = +3
Query: 69 TMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 248
T+QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP DQQRLIFAGKQLEDG TL+DY
Sbjct: 2 TIQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADY 61
Query: 249 NIQKESTLHLVLRLRGG 299
NIQKESTLHLVLRLRGG
Sbjct: 62 NIQKESTLHLVLRLRGG 78
Score = 116 bits (280), Expect = 8e-27
Identities = 58/74 (78%), Positives = 64/74 (86%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
MQIF+KTLTGKTI LEVE+SDTI NVK KIQ KEGI PDQQ LIF G+QLEDG TL DY+
Sbjct: 552 MQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYD 611
Query: 252 IQKESTLHLVLRLR 293
I K+STL+LVLRLR
Sbjct: 612 IHKKSTLYLVLRLR 625
Score = 108 bits (260), Expect = 2e-24
Identities = 59/90 (65%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI--PPDQQRLI 203
K S + V F MQIFVKTLT K I LEVE+ DTIENVKA +QDKEGI P+ QRLI
Sbjct: 305 KGSTLYLVTRFRCGMQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLI 364
Query: 204 FAGKQLEDGRTLSDYNIQKESTLHLVLRLR 293
F GK+L+DG TL+DY+IQKESTLHLVL ++
Sbjct: 365 FLGKELKDGCTLADYSIQKESTLHLVLGMQ 394
Score = 108 bits (260), Expect = 2e-24
Identities = 53/76 (69%), Positives = 60/76 (78%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
MQIFVK GK ITLEV +SDTI++VKAKIQDK G PPDQQ L+F G QL+DGRTL DYN
Sbjct: 393 MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYN 452
Query: 252 IQKESTLHLVLRLRGG 299
I+ ESTLHL +R G
Sbjct: 453 IRNESTLHLFFHIRHG 468
Score = 102 bits (245), Expect = 1e-22
Identities = 57/96 (59%), Positives = 70/96 (72%), Gaps = 7/96 (7%)
Frame = +3
Query: 30 KKS*ILRVVYFSNTMQIFVKTLTGK-----TITLEVEASDTIENVKAKIQDKEGIPPDQQ 194
K+S + V+ MQIFV T +GK T+TL+VE+SDTIENVKAKIQD+EG+ PD Q
Sbjct: 141 KESTLHLVLRLCGGMQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQ 200
Query: 195 RLIFAGKQL--EDGRTLSDYNIQKESTLHLVLRLRG 296
RLIF G++L ED RTL+DY I+ STL L LRLRG
Sbjct: 201 RLIFHGEELFTEDNRTLADYGIRNRSTLCLALRLRG 236
Score = 99 bits (238), Expect = 1e-21
Identities = 54/81 (66%), Positives = 60/81 (74%), Gaps = 5/81 (6%)
Frame = +3
Query: 72 MQIFVKTL-----TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 236
M IFVK L TG+ LEVE+SDTI+NVKAK+QDKE IP D RLIFAGK LE GRT
Sbjct: 238 MYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRT 297
Query: 237 LSDYNIQKESTLHLVLRLRGG 299
L+ YNIQK STL+LV R R G
Sbjct: 298 LAHYNIQKGSTLYLVTRFRCG 318
Score = 96.3 bits (229), Expect = 1e-20
Identities = 53/83 (63%), Positives = 59/83 (71%), Gaps = 7/83 (8%)
Frame = +3
Query: 72 MQIFVKTL-------TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 230
MQIFVKT T KTITLEVE+SDTI+NVK KIQ K GIP D+QRLIF G+ L
Sbjct: 469 MQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGS 528
Query: 231 RTLSDYNIQKESTLHLVLRLRGG 299
RTL DYNIQK ST+H + RGG
Sbjct: 529 RTLLDYNIQKGSTIHQLFLQRGG 551
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 116 bits (278), Expect = 1e-26
Identities = 55/73 (75%), Positives = 62/73 (84%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
M IF+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP DQQRLIF GKQLEDG TL+DYN
Sbjct: 86 MFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYN 145
Query: 252 IQKESTLHLVLRL 290
IQ +S LHL+ RL
Sbjct: 146 IQNDSILHLIKRL 158
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 95.5 bits (227), Expect = 2e-20
Identities = 43/76 (56%), Positives = 57/76 (75%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
M+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 252 IQKESTLHLVLRLRGG 299
+++ S LHLVL LRGG
Sbjct: 61 LERGSVLHLVLALRGG 76
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 69.3 bits (162), Expect = 2e-12
Identities = 30/74 (40%), Positives = 50/74 (67%)
Frame = +3
Query: 66 NTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 245
+T+++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+
Sbjct: 22 STLELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSE 81
Query: 246 YNIQKESTLHLVLR 287
Y+++ TLHL++R
Sbjct: 82 YHLENGHTLHLIVR 95
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 69.3 bits (162), Expect = 2e-12
Identities = 41/86 (47%), Positives = 51/86 (59%), Gaps = 13/86 (15%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK------------ 215
M IF+KTLTG+T T EV+ SDTI +KAK ++KEGIP +QQRLIF G+
Sbjct: 50 MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSIN 109
Query: 216 -QLEDGRTLSDYNIQKESTLHLVLRL 290
++ D D I E T LVLRL
Sbjct: 110 LEVADSSDTIDLKINGEPTRQLVLRL 135
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/67 (47%), Positives = 46/67 (68%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
M+IFV T+ KT LEV+ SDTI+ +K+ I D+ G P DQQ L G +L++ T+SDYN
Sbjct: 141 MRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISDYN 200
Query: 252 IQKESTL 272
I+ ++ L
Sbjct: 201 IKPDANL 207
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVE-ASDTIE 143
M I +KTL GK I LEVE +S+TI+
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTID 25
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 64.1 bits (149), Expect = 6e-11
Identities = 31/78 (39%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Frame = +3
Query: 63 SNTMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 239
S +QIFV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L
Sbjct: 92 STRLQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSL 151
Query: 240 SDYNIQKESTLHLVLRLR 293
+ Y+I+++++L LV R++
Sbjct: 152 TYYSIEQDASLQLVARMQ 169
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 59.3 bits (137), Expect = 2e-09
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Frame = +3
Query: 57 YFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGR 233
Y +T+ I++ TL G I + V SD+IE+VK +IQ G Q+L+F G++L
Sbjct: 30 YPDDTIMIYL-TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNS 88
Query: 234 TLSDYNIQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICR 362
+ DY + + + LHLVL+L L++L +K C K CR
Sbjct: 89 NMRDYGVSEGNILHLVLKL------SDLQVLDVKTTCGKH-CR 124
Score = 52.0 bits (119), Expect = 3e-07
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Frame = +3
Query: 24 GSKKS*ILRVVYFSNTMQIF-VKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQ 194
G + IL +V + +Q+ VKT GK VE I VK +I K G + PD+Q
Sbjct: 94 GVSEGNILHLVLKLSDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQ 153
Query: 195 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 287
+++ G++LED ++D +S LHL++R
Sbjct: 154 EILYEGEKLEDQSLINDICRNDDSVLHLLVR 184
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 59.3 bits (137), Expect = 2e-09
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Frame = +3
Query: 57 YFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGR 233
Y +T+ I++ TL G I + V SD+IE+VK +IQ G Q+L+F G++L
Sbjct: 30 YPDDTIMIYL-TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNS 88
Query: 234 TLSDYNIQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICR 362
+ DY + + + LHLVL+L L++L +K C K CR
Sbjct: 89 NMRDYGVSEGNILHLVLKL------SDLQVLDVKTTCGKH-CR 124
Score = 52.0 bits (119), Expect = 3e-07
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Frame = +3
Query: 24 GSKKS*ILRVVYFSNTMQIF-VKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQ 194
G + IL +V + +Q+ VKT GK VE I VK +I K G + PD+Q
Sbjct: 94 GVSEGNILHLVLKLSDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQ 153
Query: 195 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 287
+++ G++LED ++D +S LHL++R
Sbjct: 154 EILYEGEKLEDQSLINDICRNDDSVLHLLVR 184
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 54.4 bits (125), Expect = 5e-08
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +3
Query: 63 SNTMQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 239
S +Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ DG +
Sbjct: 6 SKPLQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAI 65
Query: 240 SDYNIQKESTLHLVLRLRGG 299
S Q ++T++LVL LRGG
Sbjct: 66 S----QPDATVNLVLSLRGG 81
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 53.2 bits (122), Expect = 1e-07
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 245
M+IFVKTL+G +EV+ +D + +VK I+ +G P +Q LI GK L+D TL +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 246 YNIQKESTLHLVL 284
N+ + S + ++L
Sbjct: 61 NNVVENSFIVIML 73
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 51.2 bits (117), Expect = 4e-07
Identities = 27/75 (36%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +3
Query: 60 FSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRT 236
F++ ++I +K L T TL VE + + ++K I G+ P++Q RL+F G+ L++ +
Sbjct: 7 FTDLIRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQR 66
Query: 237 LSDYNIQKESTLHLV 281
LSDY++++ TL+LV
Sbjct: 67 LSDYHVEEGHTLYLV 81
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 51.2 bits (117), Expect = 4e-07
Identities = 20/66 (30%), Positives = 38/66 (57%)
Frame = +3
Query: 84 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 263
++ G +++ T+E+ K + +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 264 STLHLV 281
T+H+V
Sbjct: 82 HTIHMV 87
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 50.8 bits (116), Expect = 6e-07
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK---QLEDGRTLS 242
MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 243 DYNIQKESTLHLVLRLRGG 299
DY I+ H+ R+RGG
Sbjct: 61 DYKIKACDIFHMSDRMRGG 79
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 50.8 bits (116), Expect = 6e-07
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
M +++ T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 252 IQKESTLHL 278
I ES L L
Sbjct: 61 ILFESRLLL 69
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 50.8 bits (116), Expect = 6e-07
Identities = 22/66 (33%), Positives = 37/66 (56%)
Frame = +3
Query: 84 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 263
V+ G ++ T+E+ K I +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 VRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 264 STLHLV 281
T+H+V
Sbjct: 82 HTVHMV 87
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/71 (30%), Positives = 45/71 (63%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
M+I V T + ITL+V++ +T+ENVKA ++ + +P QQ+L++ G ++ + LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 252 IQKESTLHLVL 284
++ + L +++
Sbjct: 61 VKDDDLLMMMV 71
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 49.6 bits (113), Expect = 1e-06
Identities = 26/79 (32%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = +3
Query: 57 YFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGR 233
Y ++ +F+ +++G T+ + + SD+I VK +IQ G +Q+L+F+G++L +
Sbjct: 30 YSVKSVLVFL-SVSGSTMPMLILESDSIAEVKLRIQTCNGFRVRRQKLVFSGRELARNAS 88
Query: 234 TLSDYNIQKESTLHLVLRL 290
+ DY + S LHLVL+L
Sbjct: 89 RVKDYGVTGGSVLHLVLKL 107
Score = 35.5 bits (78), Expect = 0.024
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +3
Query: 51 VVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKI-QDKEGIPP-DQQRLIFAGKQLE 224
V+ + + + V T GK V+ + +K +I ++ +G P D Q ++F G++L+
Sbjct: 104 VLKLYDPLLVTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLD 163
Query: 225 DGRTLSDYNIQKESTLHLVLR 287
D R + S +HL+++
Sbjct: 164 DNRIIDGICKDGNSVIHLLVK 184
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 48.8 bits (111), Expect = 2e-06
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 248
+Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ +S
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66
Query: 249 NIQKESTLHLVLRLRGGT--IEPSLRILAMKYNCEK 350
Q ++T++LVL LRGG + LR + MK +K
Sbjct: 67 --QSDTTMNLVLSLRGGKGGLGSLLRNVVMKAGQKK 100
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 48.0 bits (109), Expect = 4e-06
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
M + + T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 252 IQKESTL 272
I ES L
Sbjct: 61 ILFESLL 67
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 47.2 bits (107), Expect = 7e-06
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
M++ V+ +G T ++++ DT+ K KI+ + IP +Q + F GK LED + +++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 252 IQKESTLHL 278
I + LHL
Sbjct: 61 ILQNPLLHL 69
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 47.2 bits (107), Expect = 7e-06
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 242
M+IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 243 DYNIQKESTLHLVL 284
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 47.2 bits (107), Expect = 7e-06
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 242
M+IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 243 DYNIQKESTLHLVL 284
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Frame = +3
Query: 51 VVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE---GIPPDQQRLIFAGKQL 221
V+ S+ I V+T+ GK L VE S + VK +I KE GIP D + L G++L
Sbjct: 102 VIRLSDLQAISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEEL 160
Query: 222 EDGRTLSDYNIQKESTLHLVL 284
+D R ++D ++ +HL++
Sbjct: 161 DDQRLITDLCQNGDNVIHLLI 181
Score = 44.8 bits (101), Expect = 4e-05
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 90 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRTLSDYNIQKES 266
T+ G I V SD+I +VK +IQ +G +Q+L++ G+++ + + DY +
Sbjct: 38 TIAGSVIPKRVMESDSIASVKLRIQSIKGFFVKKQKLLYDGREVSRNDSQIRDYGLADGK 97
Query: 267 TLHLVLRL 290
LHLV+RL
Sbjct: 98 LLHLVIRL 105
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 242
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 243 DYNIQKESTLHLVL 284
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 242
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 243 DYNIQKESTLHLVL 284
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 242
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 243 DYNIQKESTLHLVL 284
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/72 (30%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +3
Query: 69 TMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSD 245
+M+I VK+L GK L V +++ +++AK K + ++ + GK+L+D ++L+
Sbjct: 660 SMKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAA 719
Query: 246 YNIQKESTLHLV 281
N+Q S +HL+
Sbjct: 720 QNVQPNSLVHLI 731
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 242
M++ VKTL G + V +DTI VK I+D K+ P QQ LI GK L+D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 243 DYNIQKESTLHLVL 284
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +3
Query: 69 TMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSD 245
TM+I + L GK L V +++ ++KAK K + ++ + GK+LED ++L++
Sbjct: 499 TMKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAE 558
Query: 246 YNIQKESTLHLV 281
N+Q S +HL+
Sbjct: 559 QNVQPNSLVHLL 570
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 44.0 bits (99), Expect = 7e-05
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
M +F +T +G T +E+ DT+ +K KI+ + IP +Q L+F G L+D +
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60
Query: 252 IQKESTLHL 278
I S + L
Sbjct: 61 ILNHSRIQL 69
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 40.3 bits (90), Expect = 8e-04
Identities = 20/69 (28%), Positives = 38/69 (55%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
+++ ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61
Query: 252 IQKESTLHL 278
I+ S + L
Sbjct: 62 IRHNSRILL 70
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 40.3 bits (90), Expect = 8e-04
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +3
Query: 54 VYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 233
V + + ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D
Sbjct: 30 VSIDTMISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHL 89
Query: 234 TLSDYNIQKESTLHL 278
+ I+ S + L
Sbjct: 90 NMFGCQIRHNSRILL 104
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 40.3 bits (90), Expect = 8e-04
Identities = 23/72 (31%), Positives = 42/72 (58%)
Frame = +3
Query: 66 NTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 245
+T+++ VK GK+I L V T++++K+++Q + P Q+LIF GK L + TL
Sbjct: 534 STIKLTVK-FGGKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQ 592
Query: 246 YNIQKESTLHLV 281
++ + L L+
Sbjct: 593 SDVGSGAKLMLM 604
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 185
M IFV TL GKT LEV+ S+ I+ VK I D+ +PP
Sbjct: 49 MSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/25 (56%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVE-ASDTIE 143
M+I +KT GKTI LE+E +S+TI+
Sbjct: 1 MKILIKTEKGKTINLELEDSSETID 25
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 227
M +F +T +G +E+ DT+ +K KI+ + IP +Q LIF G L+D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 37.1 bits (82), Expect = 0.008
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 212
M+ V+ L G + +EVE +DT+ VK KI+ + +P +Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 37.1 bits (82), Expect = 0.008
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +3
Query: 72 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 212
M+ V+ L G + LEV+ DT+ VK KI+ + IP +Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 37.1 bits (82), Expect = 0.008
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 99 GKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 275
G+ + + V++ S+ + ++K KI + IP ++Q+L L+D +L+ YN+ L
Sbjct: 715 GQFMEITVQSLSENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILT 774
Query: 276 LVLRLRGG 299
L LR RGG
Sbjct: 775 LSLRERGG 782
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 36.3 bits (80), Expect = 0.014
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 114 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 227
L +EA+ T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 35.1 bits (77), Expect = 0.031
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 75 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 236
++FV+T TG + LE++ SD VK K+Q P ++ L F L++ T
Sbjct: 42 RVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 34.3 bits (75), Expect = 0.055
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 84 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 227
V T++ + + ++A+ T +K I GI +QRL+F GK+ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 33.1 bits (72), Expect = 0.13
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Frame = +3
Query: 114 LEVEASD-TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG----RTLSDYNIQKESTL 272
LEVE + T+ ++ ++ + G+ P+ +LIFAGK L+D TLS I++ S +
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 30.3 bits (65), Expect = 0.89
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 13/67 (19%)
Frame = +3
Query: 129 SDTIENVKAKI-----QDKEGIPP--DQQRLIFAGKQLEDGRTLSDYNIQ------KEST 269
S T+ ++K K+ +DKE P + +LI AGK LE+ RTL++ + T
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAESRLPVCELPGMIIT 87
Query: 270 LHLVLRL 290
+H+VLRL
Sbjct: 88 MHIVLRL 94
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 123 EASDTIENVKAKIQDKEG-IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 278
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At4g38340.1 68417.m05420 RWP-RK domain-containing protein similar
to nodule inception protein GI:6448579 from (Lotus
japonicus); contains Pfam profile: PF02042 RWP-RK domain
Length = 767
Score = 27.9 bits (59), Expect = 4.8
Identities = 20/85 (23%), Positives = 40/85 (47%)
Frame = +3
Query: 99 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 278
GK ++ ++ ++EN K K + ++ I D R FAG + + + +TL
Sbjct: 473 GKQVSFSFSSASSLENRKRKTKAEKDITLDTLRQHFAGSLKDAAKNIG----VCPTTLKR 528
Query: 279 VLRLRGGTIEPSLRILAMKYNCEKM 353
+ R G + PS +I + ++ K+
Sbjct: 529 ICRQNGISRWPSRKIKKVGHSLRKL 553
>At4g16070.1 68417.m02437 lipase class 3 family protein low
similarity to calmodulin-binding heat-shock protein
CaMBP [Nicotiana tabacum] GI:1087073; contains Pfam
profile PF01764: Lipase, PF03893: Lipase 3 N-terminal
region
Length = 654
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = -3
Query: 458 ILDLLFGSQIVSVSALCLATVGSTRMKTGIAFTANHFLTVILHGENAKGRFNCTS 294
+L + Q SA C + M +A + HF+T I++G + F+ +S
Sbjct: 267 LLTYILREQKEFASATCFTFAPAACMTWDLAESGKHFITTIINGSDLVPTFSASS 321
>At3g47160.1 68416.m05120 expressed protein similar to MTD2
[Medicago truncatula] GI:9294812; supporting cDNA
gi|25083983|gb|BT002136.1|
Length = 245
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = +3
Query: 237 LSDYNIQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNC 401
LS+ +I++E + + + + P NC +C KCY H R+ +C
Sbjct: 136 LSEIDIEREEECGICMEMNNMVVLP---------NCTHSLCIKCYRDWHGRSESC 181
>At3g46530.1 68416.m05051 disease resistance protein, RPP13-like
(CC-NBS class), putative domain signature CC-NBS exists,
suggestive of a disease resistance protein. Closest
homolog in Col-0 to RPP13.
Length = 835
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -3
Query: 206 KDETLLVWRNTFLVLDFSFDIFDSVGSFHLQ 114
+DE W LVLDF++D+ D + ++HL+
Sbjct: 54 EDEVSKEWSK--LVLDFAYDVEDVLDTYHLK 82
>At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding
protein-related similar to matrix-localized MAR DNA
binding protein MFP1 GI:1771158 from [Lycopersicon
esculentum]
Length = 726
Score = 27.5 bits (58), Expect = 6.3
Identities = 20/80 (25%), Positives = 39/80 (48%)
Frame = +3
Query: 126 ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTI 305
A +TIE++K +++D+E +++ A Q E + KE L L+ +L +
Sbjct: 154 AEETIESLKNQLKDRERALVLKEKDFEAKLQHEQEERKKEVEKAKEEQLSLINQL--NSA 211
Query: 306 EPSLRILAMKYNCEKMICRK 365
+ + L + + EK +C K
Sbjct: 212 KDLVTELGRELSSEKKLCEK 231
>At2g19180.1 68415.m02238 expressed protein
Length = 179
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 489 YNKFPIWLLFNP*SSFWV 436
+N P WL F P SSFWV
Sbjct: 73 HNSTPDWLPFAPGSSFWV 90
>At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 941
Score = 27.5 bits (58), Expect = 6.3
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 206 CRETIRRWPHSFRL*HPERIHTSPGFE 286
C+ETI+ W H+ + + H PG E
Sbjct: 447 CKETIQEWHHAINVLNSPAGHKFPGME 473
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 93 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 230
+TG T E DTI K ++ G P + ++F+G DG
Sbjct: 323 VTGMRTTKEARIGDTIYRTKTTVEPLPGFKP-VRHMVFSGVYPADG 367
>At1g74750.1 68414.m08661 pentatricopeptide (PPR) repeat-containing
protein low similarity to post-transcriptional control
of chloroplast gene expression CRP1 [Zea mays]
GI:3289002; contains Pfam profile PF01535: PPR repeat
Length = 855
Score = 27.1 bits (57), Expect = 8.3
Identities = 18/90 (20%), Positives = 43/90 (47%)
Frame = +3
Query: 129 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIE 308
+D++ + A I++ G+P Q + +++Y I +V + ++
Sbjct: 106 ADSVNHASAIIKEDVGVPIGDQIFKAGIGNVNLLSDIANYKIPLSDGTEVVGLPKSCMVD 165
Query: 309 PSLRILAMKYNCEKMICRKCYARLHPRATN 398
P+ I +K + K+I R+ A+++PR+ +
Sbjct: 166 PTRPISGVKSSNVKVIRREHLAKVYPRSAD 195
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,018,010
Number of Sequences: 28952
Number of extensions: 256545
Number of successful extensions: 857
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1043173136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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