BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmte10e02 (437 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 10_08_0491 - 18283404-18283482,18283590-18283658,18283767-182838... 29 2.2 12_01_0002 - 4477-6144,6571-7440 27 5.0 11_01_0003 - 6099-7766,8193-9062 27 5.0 05_01_0378 + 2970528-2971008,2971961-2972036,2972108-2972253,297... 27 6.6 08_01_0400 - 3538570-3540363,3540895-3541639,3543688-3544007 27 8.7 07_03_0834 - 21848064-21849752,21851121-21851850,21852617-21852705 27 8.7 07_01_0365 + 2718707-2718839,2719335-2719405,2719512-2719955,272... 27 8.7 >10_08_0491 - 18283404-18283482,18283590-18283658,18283767-18283883, 18283953-18284068,18284149-18284223,18284248-18284430, 18284530-18284591,18284668-18285606,18285723-18285846, 18285917-18286060,18286151-18286225,18286359-18286382, 18287025-18287095,18287305-18287407,18287555-18287781, 18287910-18288027,18288220-18288311,18288793-18288874 Length = 899 Score = 28.7 bits (61), Expect = 2.2 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = -2 Query: 223 CLCTTAPMVHTVLEAHSYGRHIDQALTNIVSYLSIF 116 C C P+ +VLE SY RH+ AL I+ + F Sbjct: 794 CTCVL-PLASSVLEKSSYDRHLKVALEMILKLVKSF 828 >12_01_0002 - 4477-6144,6571-7440 Length = 845 Score = 27.5 bits (58), Expect = 5.0 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = -1 Query: 173 IWASHRSGFDEYCLLFKHILTLNVFAVKVFFALKIVALSI-LGNL 42 +W +HR+G E L ++ L+ FAV V + VA I LG + Sbjct: 116 LWLAHRTGAGESVLATTAVVALSTFAVAVAGSAGTVAKRIALGQI 160 >11_01_0003 - 6099-7766,8193-9062 Length = 845 Score = 27.5 bits (58), Expect = 5.0 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = -1 Query: 173 IWASHRSGFDEYCLLFKHILTLNVFAVKVFFALKIVALSI-LGNL 42 +W +HR+G E L ++ L+ FAV V + VA I LG + Sbjct: 116 LWLAHRTGAGESVLATTAVVALSTFAVAVAGSAGTVAKRIALGQI 160 >05_01_0378 + 2970528-2971008,2971961-2972036,2972108-2972253, 2972300-2972817 Length = 406 Score = 27.1 bits (57), Expect = 6.6 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -3 Query: 120 YFNP*RICSKGFFRS*NCCSKHFRKFIISFD*FLRFDA 7 YFN + +G+F S C S FR F ++ D LR+ A Sbjct: 263 YFNNIMLPQEGYFHSVICNSLEFRNFTVNND--LRYKA 298 >08_01_0400 - 3538570-3540363,3540895-3541639,3543688-3544007 Length = 952 Score = 26.6 bits (56), Expect = 8.7 Identities = 14/45 (31%), Positives = 23/45 (51%) Frame = +1 Query: 208 PWYKDMQSYYNKVLVIGVAWFAFSFGMMIYTESLYLNFSPPAQPG 342 P+ K + + K V+ + W+AF+F + T LY+N PG Sbjct: 884 PFAKGILGKHGKTPVVVLVWWAFTF---VITAVLYINIPHIHGPG 925 >07_03_0834 - 21848064-21849752,21851121-21851850,21852617-21852705 Length = 835 Score = 26.6 bits (56), Expect = 8.7 Identities = 14/63 (22%), Positives = 26/63 (41%) Frame = -2 Query: 313 STNFPCISSCRMRKQTKQRQSPEPCYNSFACLCTTAPMVHTVLEAHSYGRHIDQALTNIV 134 S N P ++ CR+R + + Y A ++ + +H HI + + V Sbjct: 568 SRNCPLLAGCRLRPMQRVAYANMTAYPVSALFMVVYDLLPVIWLSHHGEFHIQKPFSTYV 627 Query: 133 SYL 125 +YL Sbjct: 628 AYL 630 >07_01_0365 + 2718707-2718839,2719335-2719405,2719512-2719955, 2720660-2721802 Length = 596 Score = 26.6 bits (56), Expect = 8.7 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Frame = +1 Query: 226 QSYYNKVLVIGVAWFAFSFGMMIYTESLYLNFSPPAQPGPPSDMVEE-CEDIEP*MRYW 399 QS+ + IG AW FG + ++ P G P + VE+ E E +R+W Sbjct: 517 QSFLSLTDAIGAAWTFLIFGGLSVAALAFVLVCVPETKGLPIEEVEKMLEGRELRLRFW 575 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,411,339 Number of Sequences: 37544 Number of extensions: 225273 Number of successful extensions: 678 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 665 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 677 length of database: 14,793,348 effective HSP length: 76 effective length of database: 11,940,004 effective search space used: 823860276 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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