Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10e02
         (437 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113572-1|AAM29577.1|   90|Drosophila melanogaster RH19679p pro...    40   0.001
AE014296-2905|AAF49346.2|   90|Drosophila melanogaster CG7630-PA...    40   0.001
AY060385-1|AAL25424.1|  194|Drosophila melanogaster LD28933p pro...    29   2.1  
AE014296-2575|AAF49581.1|  192|Drosophila melanogaster CG6151-PB...    29   2.1  
AE014296-2574|AAN11768.1|  157|Drosophila melanogaster CG6151-PC...    29   2.1  
AE014296-2573|AAN11767.1|  194|Drosophila melanogaster CG6151-PA...    29   2.1  
DQ191319-1|ABB80264.1|  495|Drosophila melanogaster p53 protein ...    27   8.4  
DQ191318-1|ABB80263.1|  495|Drosophila melanogaster p53 protein ...    27   8.4  
BT001357-1|AAN71112.1|  519|Drosophila melanogaster AT28346p pro...    27   8.4  
AY069096-1|AAL39241.1|  385|Drosophila melanogaster GH11591p pro...    27   8.4  
AF263722-1|AAF75270.1|  385|Drosophila melanogaster transcriptio...    27   8.4  
AF250918-1|AAF74277.1|  385|Drosophila melanogaster transcriptio...    27   8.4  
AF244918-1|AAF61572.1|  385|Drosophila melanogaster p53 tumor su...    27   8.4  
AF224714-1|AAF40428.1|  385|Drosophila melanogaster transcriptio...    27   8.4  
AF224713-1|AAF40427.1|  385|Drosophila melanogaster transcriptio...    27   8.4  
AF192555-1|AAL56639.1|  385|Drosophila melanogaster p53-like reg...    27   8.4  
AE014297-3260|AAF56087.2|  385|Drosophila melanogaster CG33336-P...    27   8.4  
AE014297-3259|AAN13925.2|  495|Drosophila melanogaster CG33336-P...    27   8.4  

>AY113572-1|AAM29577.1|   90|Drosophila melanogaster RH19679p
           protein.
          Length = 90

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +1

Query: 172 MNELPVPCGPWEPWYKDMQSYYNKVLVIGVAWFAFSFGMMIYTESLYLNFSPP 330
           MN+LPVP G W+  +    + YN  L+ G+   A + G +  +  ++ N+  P
Sbjct: 34  MNDLPVPAGDWKEQHSQKNAKYNAALITGILVLAGTIGFVKSSGIIHFNYYAP 86


>AE014296-2905|AAF49346.2|   90|Drosophila melanogaster CG7630-PA
           protein.
          Length = 90

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +1

Query: 172 MNELPVPCGPWEPWYKDMQSYYNKVLVIGVAWFAFSFGMMIYTESLYLNFSPP 330
           MN+LPVP G W+  +    + YN  L+ G+   A + G +  +  ++ N+  P
Sbjct: 34  MNDLPVPAGDWKEQHSQKNAKYNAALITGILVLAGTIGFVKSSGIIHFNYYAP 86


>AY060385-1|AAL25424.1|  194|Drosophila melanogaster LD28933p
           protein.
          Length = 194

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +1

Query: 190 PCGPWEPWYKDMQSYYNKVLVIGVAWFAFSFGM 288
           P GP +PWY     Y +++L I  A+FA  FG+
Sbjct: 19  PIGPEQPWY---LKYGSRLLGIVAAFFAILFGL 48


>AE014296-2575|AAF49581.1|  192|Drosophila melanogaster CG6151-PB,
           isoform B protein.
          Length = 192

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +1

Query: 190 PCGPWEPWYKDMQSYYNKVLVIGVAWFAFSFGM 288
           P GP +PWY     Y +++L I  A+FA  FG+
Sbjct: 19  PIGPEQPWY---LKYGSRLLGIVAAFFAILFGL 48


>AE014296-2574|AAN11768.1|  157|Drosophila melanogaster CG6151-PC,
           isoform C protein.
          Length = 157

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +1

Query: 190 PCGPWEPWYKDMQSYYNKVLVIGVAWFAFSFGM 288
           P GP +PWY     Y +++L I  A+FA  FG+
Sbjct: 19  PIGPEQPWY---LKYGSRLLGIVAAFFAILFGL 48


>AE014296-2573|AAN11767.1|  194|Drosophila melanogaster CG6151-PA,
           isoform A protein.
          Length = 194

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +1

Query: 190 PCGPWEPWYKDMQSYYNKVLVIGVAWFAFSFGM 288
           P GP +PWY     Y +++L I  A+FA  FG+
Sbjct: 19  PIGPEQPWY---LKYGSRLLGIVAAFFAILFGL 48


>DQ191319-1|ABB80264.1|  495|Drosophila melanogaster p53 protein
           long form variant 2 protein.
          Length = 495

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 364 LQPCRLVDRVGLVARNLSTNFPCISSCRMRKQT 266
           L   R V R GL  + L+  F C +SC  RK+T
Sbjct: 315 LNMSRSVTRSGLTRQTLAFKFVCQNSCIGRKET 347


>DQ191318-1|ABB80263.1|  495|Drosophila melanogaster p53 protein
           long form variant 1 protein.
          Length = 495

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 364 LQPCRLVDRVGLVARNLSTNFPCISSCRMRKQT 266
           L   R V R GL  + L+  F C +SC  RK+T
Sbjct: 315 LNMSRSVTRSGLTRQTLAFKFVCQNSCIGRKET 347


>BT001357-1|AAN71112.1|  519|Drosophila melanogaster AT28346p
           protein.
          Length = 519

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 364 LQPCRLVDRVGLVARNLSTNFPCISSCRMRKQT 266
           L   R V R GL  + L+  F C +SC  RK+T
Sbjct: 339 LNMSRSVTRSGLTRQTLAFKFVCQNSCIGRKET 371


>AY069096-1|AAL39241.1|  385|Drosophila melanogaster GH11591p
           protein.
          Length = 385

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 364 LQPCRLVDRVGLVARNLSTNFPCISSCRMRKQT 266
           L   R V R GL  + L+  F C +SC  RK+T
Sbjct: 205 LNMSRSVTRSGLTRQTLAFKFVCQNSCIGRKET 237


>AF263722-1|AAF75270.1|  385|Drosophila melanogaster transcription
           factor p53 protein.
          Length = 385

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 364 LQPCRLVDRVGLVARNLSTNFPCISSCRMRKQT 266
           L   R V R GL  + L+  F C +SC  RK+T
Sbjct: 205 LNMSRSVTRSGLTRQTLAFKFVCQNSCIGRKET 237


>AF250918-1|AAF74277.1|  385|Drosophila melanogaster transcription
           factor protein.
          Length = 385

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 364 LQPCRLVDRVGLVARNLSTNFPCISSCRMRKQT 266
           L   R V R GL  + L+  F C +SC  RK+T
Sbjct: 205 LNMSRSVTRSGLTRQTLAFKFVCQNSCIGRKET 237


>AF244918-1|AAF61572.1|  385|Drosophila melanogaster p53 tumor
           suppressor-like protein protein.
          Length = 385

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 364 LQPCRLVDRVGLVARNLSTNFPCISSCRMRKQT 266
           L   R V R GL  + L+  F C +SC  RK+T
Sbjct: 205 LNMSRSVTRSGLTRQTLAFKFVCQNSCIGRKET 237


>AF224714-1|AAF40428.1|  385|Drosophila melanogaster transcription
           factor p53 protein.
          Length = 385

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 364 LQPCRLVDRVGLVARNLSTNFPCISSCRMRKQT 266
           L   R V R GL  + L+  F C +SC  RK+T
Sbjct: 205 LNMSRSVTRSGLTRQTLAFKFVCQNSCIGRKET 237


>AF224713-1|AAF40427.1|  385|Drosophila melanogaster transcription
           factor p53 protein.
          Length = 385

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 364 LQPCRLVDRVGLVARNLSTNFPCISSCRMRKQT 266
           L   R V R GL  + L+  F C +SC  RK+T
Sbjct: 205 LNMSRSVTRSGLTRQTLAFKFVCQNSCIGRKET 237


>AF192555-1|AAL56639.1|  385|Drosophila melanogaster p53-like
           regulator of apoptosisand cell cycle protein.
          Length = 385

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 364 LQPCRLVDRVGLVARNLSTNFPCISSCRMRKQT 266
           L   R V R GL  + L+  F C +SC  RK+T
Sbjct: 205 LNMSRSVTRSGLTRQTLAFKFVCQNSCIGRKET 237


>AE014297-3260|AAF56087.2|  385|Drosophila melanogaster CG33336-PA,
           isoform A protein.
          Length = 385

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 364 LQPCRLVDRVGLVARNLSTNFPCISSCRMRKQT 266
           L   R V R GL  + L+  F C +SC  RK+T
Sbjct: 205 LNMSRSVTRSGLTRQTLAFKFVCQNSCIGRKET 237


>AE014297-3259|AAN13925.2|  495|Drosophila melanogaster CG33336-PB,
           isoform B protein.
          Length = 495

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 364 LQPCRLVDRVGLVARNLSTNFPCISSCRMRKQT 266
           L   R V R GL  + L+  F C +SC  RK+T
Sbjct: 315 LNMSRSVTRSGLTRQTLAFKFVCQNSCIGRKET 347


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,243,889
Number of Sequences: 53049
Number of extensions: 387566
Number of successful extensions: 1091
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1396986582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)