Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10e01
         (676 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1211 - 25319143-25320150,25320793-25321363,25321544-25321947     31   0.84 
01_07_0022 - 40543912-40544004,40545060-40545229,40545850-405459...    30   1.5  
04_03_0925 - 20856628-20856690,20856786-20856845,20856924-208570...    30   1.9  
11_01_0249 - 1913739-1914755                                           29   2.6  
12_02_0529 - 20067974-20068588,20069982-20070048,20070156-200702...    29   3.4  
05_05_0070 + 22148595-22148907,22148988-22149104,22149196-221493...    29   4.5  
06_03_1107 + 27654202-27654421,27656415-27656686,27657565-27657987     28   7.8  

>08_02_1211 - 25319143-25320150,25320793-25321363,25321544-25321947
          Length = 660

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = +1

Query: 298 GKVSTELRSAKRCLSVSSAAGSRQKNRGDVSAGKKQGRK 414
           G  STE  S    L +S+AA  +QK     S+GK  GRK
Sbjct: 570 GSPSTERVSLLETLKLSAAATEQQKKSSSSSSGKGDGRK 608


>01_07_0022 -
           40543912-40544004,40545060-40545229,40545850-40545971,
           40549272-40550909,40553212-40553720
          Length = 843

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +2

Query: 251 PDVVDHFEQYSWQVKQEKFRPNFDLLNDVY 340
           P+V +HFE  +W V   K RP  D+L D+Y
Sbjct: 223 PEVRNHFEIRTWTVLPPKCRP-ADVLRDIY 251


>04_03_0925 -
           20856628-20856690,20856786-20856845,20856924-20857001,
           20857127-20857192,20857542-20858675,20858991-20860283
          Length = 897

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -3

Query: 299 PASPAKSTA-RNGPPHPVVSGTGSFGPRQPNDRI 201
           P +PA + A  + PPHP  SG  +  P +PN  I
Sbjct: 13  PPTPAPAPAPASPPPHPAASGNEAAAPPKPNPPI 46


>11_01_0249 - 1913739-1914755
          Length = 338

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = -3

Query: 392 AETSPLFF*RLPAAEETDKHRLAD--RSSVETFPASPAKSTARNGPPHP 252
           A + PL F    A E T    + D  R +VETFP +P  ST+     HP
Sbjct: 2   APSFPLSFAPQSADEATAHKEIYDQLRQAVETFPTAPNSSTSFTYSRHP 50


>12_02_0529 -
           20067974-20068588,20069982-20070048,20070156-20070264,
           20070357-20070402,20070501-20070636,20070745-20070866,
           20070944-20071306,20071914-20072043,20072129-20072202,
           20072620-20072709,20072836-20072875,20073047-20073117,
           20074248-20074277
          Length = 630

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 21/49 (42%), Positives = 24/49 (48%)
 Frame = -3

Query: 365 RLPAAEETDKHRLADRSSVETFPASPAKSTARNGPPHPVVSGTGSFGPR 219
           R  AAE  D+ R   R SV       AK+  R+G   PVV G G  GPR
Sbjct: 502 RSVAAEAADERRR--RRSVAAERGGGAKAAERSGRAEPVVGGGG--GPR 546


>05_05_0070 +
           22148595-22148907,22148988-22149104,22149196-22149350,
           22149987-22150061,22150179-22150469,22150942-22151292,
           22151390-22151794
          Length = 568

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -3

Query: 314 SVETFPASPAKSTARNGPPHPVVSGTGSFGPRQ 216
           S  + PA P  ST+   PP+     T SF P Q
Sbjct: 492 SASSVPAYPVVSTSGTPPPYATAYATPSFSPAQ 524


>06_03_1107 + 27654202-27654421,27656415-27656686,27657565-27657987
          Length = 304

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/55 (27%), Positives = 27/55 (49%)
 Frame = +2

Query: 155 AKNFLKQQSAATGDTLYDHLVDVVQKILSQKPPDVVDHFEQYSWQVKQEKFRPNF 319
           + N  +Q S++    L   +VD  Q  + +   DV+  F ++   VK+E  + NF
Sbjct: 229 SNNPSQQPSSSMNVPLTSAMVDQEQNNMGRAIKDVLSQFTKFEGNVKREALQSNF 283


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,456,689
Number of Sequences: 37544
Number of extensions: 407195
Number of successful extensions: 1305
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1305
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)