Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10e01
(676 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82275-3|CAL44962.1| 478|Caenorhabditis elegans Hypothetical pr... 31 0.57
Z82265-8|CAB05169.2| 478|Caenorhabditis elegans Hypothetical pr... 31 0.57
AC024842-4|AAY43991.1| 703|Caenorhabditis elegans Hypothetical ... 31 0.99
AC024842-3|AAP13732.1| 1111|Caenorhabditis elegans Hypothetical ... 31 0.99
AC024842-2|ABA00150.1| 604|Caenorhabditis elegans Hypothetical ... 31 0.99
AC024842-1|AAF59622.4| 1127|Caenorhabditis elegans Hypothetical ... 31 0.99
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 29 4.0
AF000262-6|AAN60524.1| 318|Caenorhabditis elegans Lipid deplete... 29 4.0
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 5.3
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 5.3
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 5.3
AL132949-9|CAB61081.1| 254|Caenorhabditis elegans Hypothetical ... 28 7.0
Z81527-14|CAB04278.2| 506|Caenorhabditis elegans Hypothetical p... 27 9.2
Z79753-8|CAB02089.2| 506|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z74041-9|CAA98523.2| 801|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z74035-5|CAA98485.2| 801|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 27 9.2
U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protei... 27 9.2
M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein. 27 9.2
>Z82275-3|CAL44962.1| 478|Caenorhabditis elegans Hypothetical
protein F02H6.2 protein.
Length = 478
Score = 31.5 bits (68), Expect = 0.57
Identities = 17/58 (29%), Positives = 32/58 (55%)
Frame = +2
Query: 161 NFLKQQSAATGDTLYDHLVDVVQKILSQKPPDVVDHFEQYSWQVKQEKFRPNFDLLND 334
N + QQ+ GD L+ + + ++KIL Q +V+ E YS + ++ + + DL N+
Sbjct: 361 NEIMQQNHRDGDVLFGEITNTLKKILHQIHHEVLGFEEYYSEKHPEKDEQKDEDLKNE 418
>Z82265-8|CAB05169.2| 478|Caenorhabditis elegans Hypothetical
protein F02H6.2 protein.
Length = 478
Score = 31.5 bits (68), Expect = 0.57
Identities = 17/58 (29%), Positives = 32/58 (55%)
Frame = +2
Query: 161 NFLKQQSAATGDTLYDHLVDVVQKILSQKPPDVVDHFEQYSWQVKQEKFRPNFDLLND 334
N + QQ+ GD L+ + + ++KIL Q +V+ E YS + ++ + + DL N+
Sbjct: 361 NEIMQQNHRDGDVLFGEITNTLKKILHQIHHEVLGFEEYYSEKHPEKDEQKDEDLKNE 418
>AC024842-4|AAY43991.1| 703|Caenorhabditis elegans Hypothetical
protein Y59H11AR.2c protein.
Length = 703
Score = 30.7 bits (66), Expect = 0.99
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = +2
Query: 59 KMEKNLCDYMLEPDIIAATENVMPDLNNDLVLAKNFLKQQSAATGDTLYDHLVDVVQKI 235
KM C + + + + PDL + LVL N + + L +HL DV Q +
Sbjct: 361 KMTNKDCQFAISGSTFSVVTHEYPDLLDQLVLVCNVFARMAPEQKQLLVEHLQDVGQTV 419
>AC024842-3|AAP13732.1| 1111|Caenorhabditis elegans Hypothetical
protein Y59H11AR.2b protein.
Length = 1111
Score = 30.7 bits (66), Expect = 0.99
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = +2
Query: 59 KMEKNLCDYMLEPDIIAATENVMPDLNNDLVLAKNFLKQQSAATGDTLYDHLVDVVQKI 235
KM C + + + + PDL + LVL N + + L +HL DV Q +
Sbjct: 769 KMTNKDCQFAISGSTFSVVTHEYPDLLDQLVLVCNVFARMAPEQKQLLVEHLQDVGQTV 827
>AC024842-2|ABA00150.1| 604|Caenorhabditis elegans Hypothetical
protein Y59H11AR.2d protein.
Length = 604
Score = 30.7 bits (66), Expect = 0.99
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = +2
Query: 59 KMEKNLCDYMLEPDIIAATENVMPDLNNDLVLAKNFLKQQSAATGDTLYDHLVDVVQKI 235
KM C + + + + PDL + LVL N + + L +HL DV Q +
Sbjct: 262 KMTNKDCQFAISGSTFSVVTHEYPDLLDQLVLVCNVFARMAPEQKQLLVEHLQDVGQTV 320
>AC024842-1|AAF59622.4| 1127|Caenorhabditis elegans Hypothetical
protein Y59H11AR.2a protein.
Length = 1127
Score = 30.7 bits (66), Expect = 0.99
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = +2
Query: 59 KMEKNLCDYMLEPDIIAATENVMPDLNNDLVLAKNFLKQQSAATGDTLYDHLVDVVQKI 235
KM C + + + + PDL + LVL N + + L +HL DV Q +
Sbjct: 785 KMTNKDCQFAISGSTFSVVTHEYPDLLDQLVLVCNVFARMAPEQKQLLVEHLQDVGQTV 843
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 461 LLPGPIPVPLHPYLQLFRPCFLPAETSPLFF*RLP 357
L P P P P+ P L++ +PA SP+F LP
Sbjct: 165 LEPPPPPPPVPPLSPLYKVLEIPATPSPIFVAPLP 199
>AF000262-6|AAN60524.1| 318|Caenorhabditis elegans Lipid depleted
protein 2 protein.
Length = 318
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = +1
Query: 268 FRAVLLAGEAGKVSTELRSAKRCLSVSSAAGSR-----QKNRGDVSAGKKQGRK 414
F ++ GE G+ +E KR S + ++ QK R + GKK+GRK
Sbjct: 258 FGDYMMRGEDGRALSEGNKRKRATSSGAGGDTKRHKKSQKERKKAAKGKKEGRK 311
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 5.3
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Frame = +1
Query: 226 PKDPVPETTGCGGP--FRAVLLAGEAGK--VSTELRSAKRCLSVSSAAGSRQK----NRG 381
P P P +G GGP A L + G+ + E+++ K+ SV A S + RG
Sbjct: 650 PPPPPPPPSGAGGPASVLAKLPPAQDGRSNLLAEIQAGKQLRSVQQTADSPKSAGGDARG 709
Query: 382 DVSAGKKQG 408
DV A +QG
Sbjct: 710 DVMAQIRQG 718
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 5.3
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Frame = +1
Query: 226 PKDPVPETTGCGGP--FRAVLLAGEAGK--VSTELRSAKRCLSVSSAAGSRQK----NRG 381
P P P +G GGP A L + G+ + E+++ K+ SV A S + RG
Sbjct: 476 PPPPPPPPSGAGGPASVLAKLPPAQDGRSNLLAEIQAGKQLRSVQQTADSPKSAGGDARG 535
Query: 382 DVSAGKKQG 408
DV A +QG
Sbjct: 536 DVMAQIRQG 544
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 5.3
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
Frame = +2
Query: 89 LEPDIIAATENVMPDLNNDLVLAKNFLKQ--QSAATGDTLYDHLVDVVQKILSQKPPD-- 256
+E +++ + N + L + ++KN ++ ++A + Y H+V V+K++++ PD
Sbjct: 1 METEVMKSFNNELSSLFDSKNMSKNKIQDITKAAIKAKSQYKHVVFSVEKLINKCKPDQR 60
Query: 257 -----VVDHFEQYSWQVKQEK--FRPNFDLLNDVYLSP 349
V+D + S +EK F P F D +L P
Sbjct: 61 LNVLYVIDSIVRASKHQLKEKDTFGPRFMKQFDKFLMP 98
>AL132949-9|CAB61081.1| 254|Caenorhabditis elegans Hypothetical
protein Y53F4B.11 protein.
Length = 254
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = +2
Query: 164 FLKQQSAATGDTLYDHLVDVVQKILSQKPPDVVDHFEQYSWQVKQ 298
F ++ A +T+Y ++ DV I ++ PD+ F ++ +VK+
Sbjct: 91 FYEELKAKDANTVYKNMKDVPDSIAAKYLPDLARRFVEFERRVKR 135
>Z81527-14|CAB04278.2| 506|Caenorhabditis elegans Hypothetical
protein F35E12.8 protein.
Length = 506
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 302 FPASPAKSTARNGPPHPVVSGTGSFGP 222
F A +KS P +P+V GTG+F P
Sbjct: 16 FSAKYSKSVNFTCPQNPIVGGTGTFPP 42
>Z79753-8|CAB02089.2| 506|Caenorhabditis elegans Hypothetical
protein F35E12.8 protein.
Length = 506
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 302 FPASPAKSTARNGPPHPVVSGTGSFGP 222
F A +KS P +P+V GTG+F P
Sbjct: 16 FSAKYSKSVNFTCPQNPIVGGTGTFPP 42
>Z74041-9|CAA98523.2| 801|Caenorhabditis elegans Hypothetical
protein F47G9.3 protein.
Length = 801
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 229 KDPVPET-TGCGGPFRAVLLA-GEAGKVSTELRSAKRCLSVSSAAGSRQKNRGDVS 390
+D + ET TG PFRA GEA K+ E++ ++C + + +R+ D S
Sbjct: 674 RDEIKETATGFVLPFRAFRFKQGEAVKIECEVKYCEKCKKANCPSRNRRFTTFDES 729
>Z74035-5|CAA98485.2| 801|Caenorhabditis elegans Hypothetical
protein F47G9.3 protein.
Length = 801
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 229 KDPVPET-TGCGGPFRAVLLA-GEAGKVSTELRSAKRCLSVSSAAGSRQKNRGDVS 390
+D + ET TG PFRA GEA K+ E++ ++C + + +R+ D S
Sbjct: 674 RDEIKETATGFVLPFRAFRFKQGEAVKIECEVKYCEKCKKANCPSRNRRFTTFDES 729
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 27.5 bits (58), Expect = 9.2
Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Frame = -3
Query: 443 PVPLHPYLQLFRPCFLPAETSPLFF*R-LPAAEETDKHRLADRSSVETFPASPAKSTARN 267
P PL P + P F A SP F P ++ + S+ +P +P A N
Sbjct: 167 PTPLRPQI----PGFPQAGGSPSSFQAGAPTSQNVQGYPGGPSSAPSAYPGAPQVPQAPN 222
Query: 266 GPPHPVVSGTGSFGPRQP 213
P GTG F P QP
Sbjct: 223 SFIPP---GTGGFPPGQP 237
>U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protein
19 protein.
Length = 289
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -3
Query: 296 ASPAKSTARNGPPHPVVSGTGSFGPR 219
A PA R GPP P V G G GP+
Sbjct: 161 AGPAGGNGRRGPPGP-VGGPGEQGPQ 185
>M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein.
Length = 283
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -3
Query: 296 ASPAKSTARNGPPHPVVSGTGSFGPR 219
A PA R GPP P V G G GP+
Sbjct: 155 AGPAGGNGRRGPPGP-VGGPGEQGPQ 179
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,769,879
Number of Sequences: 27780
Number of extensions: 344114
Number of successful extensions: 1058
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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