Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10d21
         (644 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   2.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.0  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   5.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.6  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = -1

Query: 284 VCRQRDLSCYSKYGVQICR*ANSNKFY-LII*SCKVKEYMVNSLMFYITYIFK*WP*NSL 108
           V +Q    CYS YG+Q+        F+   + SC +  Y    L+  I  + + +   S 
Sbjct: 142 VLKQVMFLCYSTYGIQVFGTMQRTSFFKTFLNSCLMDVYYEFLLISLINILIRSF--KSR 199

Query: 107 PTDMDRSYRSVC 72
             D+++   + C
Sbjct: 200 YKDLNQKLETAC 211


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -2

Query: 97  WIVPIDRFVSVYFTFSSYYHICFYYRIPF 11
           WI+      +    F +YY+I ++ RI F
Sbjct: 314 WIIVAPAGSNFEIGFENYYNILYFSRIMF 342


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 391 NLRNVNYKYCTSI 353
           NLR + Y YC SI
Sbjct: 52  NLRRIYYFYCVSI 64


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -2

Query: 127 SGHKIVFRRTWIVPIDRFVSV 65
           +  K +F R  I+P+D F+ +
Sbjct: 242 TNEKEIFERLSILPVDEFLQI 262


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = +3

Query: 120  WPLFEDVGNVKHQA 161
            W  F+D+G ++H++
Sbjct: 2136 WVSFDDIGMIRHKS 2149


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,402
Number of Sequences: 336
Number of extensions: 2610
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)