Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10d21
         (644 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   2.7  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   2.7  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    24   4.7  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 407 TKLKYFTQRTNQEAQSAVPNY*QDLSRKHIKISSPSNH 520
           T L  +T RT    QSAV +Y Q   + H+K  +  +H
Sbjct: 629 TLLTGYTIRTLSYQQSAVLHYVQQEDKVHLKRITQQSH 666


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 407 TKLKYFTQRTNQEAQSAVPNY*QDLSRKHIKISSPSNH 520
           T L  +T RT    QSAV +Y Q   + H+K  +  +H
Sbjct: 630 TLLTGYTIRTLSYQQSAVLHYVQQEDKVHLKRITQQSH 667


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 624 SYITILVQRYFKLLIIIN 571
           SY+TILVQ Y  L  I N
Sbjct: 352 SYLTILVQYYCYLFFITN 369


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 543,142
Number of Sequences: 2352
Number of extensions: 9418
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)