Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10d18
         (452 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   0.94 
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   0.94 
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    22   8.8  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    22   8.8  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    22   8.8  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.4 bits (53), Expect = 0.94
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 268 PSASATPTWRLLGELTCHPQRHTRARTNLSS 360
           P  +  PT+ L+G++T H Q   + R +L S
Sbjct: 715 PRTAYGPTYLLIGDITKHGQVRIQLRDHLGS 745


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.4 bits (53), Expect = 0.94
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 268 PSASATPTWRLLGELTCHPQRHTRARTNLSS 360
           P  +  PT+ L+G++T H Q   + R +L S
Sbjct: 716 PRTAYGPTYLLIGDITKHGQVRIQLRDHLGS 746


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 322  PQRHTRARTNLSSR*RXXRPPRPTSGAPAPS 414
            PQR  R R + +S+     P +PT+G+ +PS
Sbjct: 1324 PQR--RRRNSSNSKHDLMSPCKPTNGSLSPS 1352


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 322  PQRHTRARTNLSSR*RXXRPPRPTSGAPAPS 414
            PQR  R R + +S+     P +PT+G+ +PS
Sbjct: 1321 PQR--RRRNSSNSKHDLMSPCKPTNGSLSPS 1349


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 297  APRRTHVSPAAAHAGAHQPLKPV 365
            APR   V+P  A  G   PL P+
Sbjct: 1133 APRIAEVAPFPATNGMAPPLSPI 1155


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 294,339
Number of Sequences: 2352
Number of extensions: 3641
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38694201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)