Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10d16
         (633 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    30   0.016
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    29   0.050
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    28   0.066
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    26   0.26 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   1.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   1.4  
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    23   3.3  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   4.3  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   5.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.5  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 30.3 bits (65), Expect = 0.016
 Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
 Frame = +3

Query: 420 VDECATNNGGCEQRCVNDPGS------FHCECSPPLSLASDGKKCVPRIPLAI 560
           +++C   NG C   C+  P          C C   L L SDG  CV ++   I
Sbjct: 33  MNQCQAVNGHCSHLCLPAPRINSKSPLLSCACPDGLKLLSDGLMCVEKVSTTI 85


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 28.7 bits (61), Expect = 0.050
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -1

Query: 486 GSFQDH*RSVAHTHHCSSHTRLHQHNTAALAWNSFP 379
           G    H  +  H HH  + T  HQH+T  LA +S+P
Sbjct: 420 GHGHSHIHATPHHHHSHAATPHHQHST-PLAHSSYP 454


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 28.3 bits (60), Expect = 0.066
 Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
 Frame = +3

Query: 420 VDECATNNGGCEQRCVNDPGS------FHCECSPPLSLASDGKKCVPR 545
           +++C   NG C   C+  P          C C   L L SDG  CV +
Sbjct: 33  MNQCQAVNGHCSHLCLPAPRINSKSPLLSCACPDGLKLLSDGLMCVEK 80


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 18/67 (26%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
 Frame = +3

Query: 348 CSCYPGFQFNAESYSKQEQPYCVDVDECATNN-GGCEQRC-VNDPGSFHCECSPPLSLAS 521
           C C PG+Q + E     E P      E  +++   C      +D G   C C P    A 
Sbjct: 247 CHCKPGYQADVEKQECTECPIGKFKHEAGSHSCEACPAHSKSSDYGFTECRCDPGYFRAE 306

Query: 522 DGKKCVP 542
              K +P
Sbjct: 307 KDPKKMP 313


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -3

Query: 337 SPCTSHACSHRFRLHGSIDFGIHRPATCWCVSQQ 236
           +P T H   H  R   S+D   HR    W V ++
Sbjct: 77  NPETHHPIRHGRRQSRSMDLNAHREQMSWPVKKE 110


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +3

Query: 450 CEQRCVNDPGSFHCECSPPLSLASDGKKCVPRIPLAIAEPLPLVRASSRCY 602
           CE  C++D  +        LSL S+       +    AEP P+ +A S+C+
Sbjct: 666 CETFCLDDDDTL---LEVALSLGSEALSAAT-VRFIEAEPQPIGKALSKCH 712


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = -3

Query: 241 QQCSLTHCTSASPTRHVCRDRNTRSVGHRAVL 146
           Q C    C+ AS  RHV      R   +R V+
Sbjct: 9   QLCGKVLCSKASLKRHVADKHAERQEEYRCVI 40


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -1

Query: 366  TQGSRNTTYSLP 331
            TQ SRN TYS P
Sbjct: 1297 TQPSRNNTYSTP 1308


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +1

Query: 1   ESRCARRWAPW 33
           E RC  +WA W
Sbjct: 142 EQRCVLKWASW 152


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 79  TTTTADTERRNRTSLTPST 135
           TTTT  T     T+ TP+T
Sbjct: 662 TTTTTTTTTTTTTTTTPNT 680


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,842
Number of Sequences: 438
Number of extensions: 4050
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)