Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10d15
(712 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22178-3|CAA80159.3| 1027|Caenorhabditis elegans Hypothetical pr... 29 2.5
AF192400-1|AAF24233.1| 1027|Caenorhabditis elegans emb-30 protei... 29 2.5
U80847-1|AAB37983.2| 738|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z82078-2|CAD54160.1| 714|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z82078-1|CAB04944.2| 707|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical p... 28 7.6
AC084152-4|AAR85899.1| 753|Caenorhabditis elegans Hypothetical ... 28 7.6
AC084152-3|AAK39314.2| 772|Caenorhabditis elegans Hypothetical ... 28 7.6
>Z22178-3|CAA80159.3| 1027|Caenorhabditis elegans Hypothetical
protein F54C8.3 protein.
Length = 1027
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 474 DSEPDEPLEPKPALKVQRKGDVFTIQVNPLKDLTEIAPNEDPYVDC 611
D EP+ EP+PA + R G F +++ + E+ P D DC
Sbjct: 640 DEEPEPEGEPQPACDLDRVGSFFEKELS--QKALEVLPKCDETFDC 683
>AF192400-1|AAF24233.1| 1027|Caenorhabditis elegans emb-30 protein
protein.
Length = 1027
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 474 DSEPDEPLEPKPALKVQRKGDVFTIQVNPLKDLTEIAPNEDPYVDC 611
D EP+ EP+PA + R G F +++ + E+ P D DC
Sbjct: 640 DEEPEPEGEPQPACDLDRVGSFFEKELS--QKALEVLPKCDETFDC 683
>U80847-1|AAB37983.2| 738|Caenorhabditis elegans Hypothetical
protein C17H11.2 protein.
Length = 738
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 237 HKPCMFLRPGLPVPAKMGWL 296
+K C LRPG+PVP M L
Sbjct: 155 YKKCQMLRPGVPVPRPMSLL 174
>Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical
protein C17H1.9 protein.
Length = 353
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +3
Query: 540 FTIQVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSPEEQAKVEAR 677
F + + LKD+ E++ N+D Y+ D K + ++K+E R
Sbjct: 207 FNVILGLLKDMKELSENKDHYLPADLKKIKYTSDEIEKHKSKLEFR 252
>Z82078-2|CAD54160.1| 714|Caenorhabditis elegans Hypothetical
protein W09D6.1b protein.
Length = 714
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 543 TIQVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSPEEQAKVEARKMV 686
T+ V + E++P +VD + V KII+KR P+ + V+ RK +
Sbjct: 498 TVPVGDVLRKFELSPKLQSHVDFE--VRKIIRKRQPKMRWAVDLRKCI 543
>Z82078-1|CAB04944.2| 707|Caenorhabditis elegans Hypothetical
protein W09D6.1a protein.
Length = 707
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 543 TIQVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSPEEQAKVEARKMV 686
T+ V + E++P +VD + V KII+KR P+ + V+ RK +
Sbjct: 498 TVPVGDVLRKFELSPKLQSHVDFE--VRKIIRKRQPKMRWAVDLRKCI 543
>Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 477 SEPDEPLEPKPALKVQRKGDVFTIQVNPLKDLTEIAPNE 593
S P P +P P ++ Q K DV+ Q NP + + P +
Sbjct: 218 SMPQSPSQPNPLVRSQSKSDVYQTQ-NPYRQDSYSQPTQ 255
>Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 477 SEPDEPLEPKPALKVQRKGDVFTIQVNPLKDLTEIAPNE 593
S P P +P P ++ Q K DV+ Q NP + + P +
Sbjct: 218 SMPQSPSQPNPLVRSQSKSDVYQTQ-NPYRQDSYSQPTQ 255
>AC084152-4|AAR85899.1| 753|Caenorhabditis elegans Hypothetical
protein Y102A11A.2b protein.
Length = 753
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 585 PNEDPYVDCDPLVFKIIKKRSPEEQAKVEARKMVKLKKQR 704
PN+ ++ FK KK+ E +AK+EA+K + +K+R
Sbjct: 466 PNQFQEIERAQREFKNQKKQEEEIRAKLEAKKKAEQEKER 505
>AC084152-3|AAK39314.2| 772|Caenorhabditis elegans Hypothetical
protein Y102A11A.2a protein.
Length = 772
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 585 PNEDPYVDCDPLVFKIIKKRSPEEQAKVEARKMVKLKKQR 704
PN+ ++ FK KK+ E +AK+EA+K + +K+R
Sbjct: 466 PNQFQEIERAQREFKNQKKQEEEIRAKLEAKKKAEQEKER 505
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,496,309
Number of Sequences: 27780
Number of extensions: 258641
Number of successful extensions: 666
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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