Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10d15
         (712 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g77740.1 68414.m09051 1-phosphatidylinositol-4-phosphate 5-ki...    30   1.7  
At4g36730.2 68417.m05212 G-box binding factor 1 (GBF1) identical...    29   4.0  
At4g36730.1 68417.m05211 G-box binding factor 1 (GBF1) identical...    29   4.0  
At5g17730.1 68418.m02079 AAA-type ATPase family protein contains...    28   7.0  

>At1g77740.1 68414.m09051 1-phosphatidylinositol-4-phosphate
           5-kinase, putative / PIP kinase, putative /
           PtdIns(4)P-5-kinase, putative / diphosphoinositide
           kinase, putative strong similarity to
           phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
           [Arabidopsis thaliana] GI:3702691; contains Pfam
           profiles PF01504: Phosphatidylinositol-4-phosphate
           5-Kinase, PF02493: MORN repeat
          Length = 754

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +2

Query: 263 RFTGASQNGVAVECGRHSWSEAATWMAAW 349
           R+ G  +NGV    G  +W++ ++W+ +W
Sbjct: 219 RYEGQWENGVPKGSGVFTWADGSSWIGSW 247


>At4g36730.2 68417.m05212 G-box binding factor 1 (GBF1) identical to
           G-box binding factor 1 SP:P42774 from [Arabidopsis
           thaliana]; contains Pfam profile: PF00170 bZIP
           transcription factor
          Length = 313

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 531 PFSVLLKLASVREVHPAPNPLLQSQHQAYY 442
           PF      +S +EV P P P  Q+  QAYY
Sbjct: 9   PFKTTKPTSSAQEVPPTPYPDWQNSMQAYY 38


>At4g36730.1 68417.m05211 G-box binding factor 1 (GBF1) identical to
           G-box binding factor 1 SP:P42774 from [Arabidopsis
           thaliana]; contains Pfam profile: PF00170 bZIP
           transcription factor
          Length = 315

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 531 PFSVLLKLASVREVHPAPNPLLQSQHQAYY 442
           PF      +S +EV P P P  Q+  QAYY
Sbjct: 9   PFKTTKPTSSAQEVPPTPYPDWQNSMQAYY 38


>At5g17730.1 68418.m02079 AAA-type ATPase family protein contains
           Pfam profile: ATPase family PF00004
          Length = 470

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 19/56 (33%), Positives = 30/56 (53%)
 Frame = +3

Query: 486 DEPLEPKPALKVQRKGDVFTIQVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSPE 653
           D+P    P ++   KG+V T    P +   E+  NEDP V  + LV K++K++  E
Sbjct: 398 DDPHHLYPEIERLIKGEVLT----PAQVAEELMKNEDPDVALEGLV-KVLKRKRLE 448


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,787,787
Number of Sequences: 28952
Number of extensions: 240541
Number of successful extensions: 676
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1535986264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)