Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10d13
         (615 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0086 + 19914234-19914382,19914590-19914653,19914793-199148...    28   6.8  
10_06_0143 - 11183574-11183761,11183989-11184344,11184437-111845...    28   6.8  
10_07_0108 - 12942031-12942048,12942167-12942357,12944659-12945307     27   8.9  
08_02_1200 + 25234208-25234370,25238527-25238819,25240003-252402...    27   8.9  

>11_06_0086 +
           19914234-19914382,19914590-19914653,19914793-19914882,
           19915000-19915056,19915147-19915195,19915393-19915469,
           19915686-19915725,19915813-19915907,19916007-19916171,
           19916317-19916427,19916515-19916602,19916691-19916757,
           19916822-19916939,19917022-19917139,19917398-19917643,
           19917736-19917833,19917961-19918143,19918237-19918356,
           19918515-19918565
          Length = 661

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 2/119 (1%)
 Frame = +1

Query: 148 LLPGYGTNPLLGKKNFGVRPVFASIDKVNMLVDKAEG-VNKVPSMYSRKQAPDLPTWIMY 324
           L+ GYG           +  VF+ I  V   V   E  +  +P M       ++P   + 
Sbjct: 425 LVQGYGLTESCSGCFTSIANVFSMIGSVGPPVTTIEARLESIPEM-GYDALSNVPRGEIC 483

Query: 325 DKNILRFQGFFQQ-SLHEMRSASHILRKVDIFFFLEDGTIKVIEPKTENSGLSQGTLIS 498
            +    F G++++  L E   +       DI  +  DGT+K+I+ K     LSQG  ++
Sbjct: 484 LRGHTLFSGYYKRPDLTEEVFSDGWFHTGDIGEWQPDGTMKIIDRKKNIFKLSQGEYVA 542


>10_06_0143 -
           11183574-11183761,11183989-11184344,11184437-11184592,
           11184825-11184994,11185906-11186064,11186856-11187164,
           11187281-11187576,11187825-11188174,11188279-11188434,
           11188634-11188803,11189289-11189447,11190702-11191010,
           11191172-11191458,11191911-11192263,11192366-11192521,
           11192680-11192849,11195800-11195958,11196937-11197254,
           11197658-11197786
          Length = 1449

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
 Frame = -1

Query: 471 AILSLRLYNLYSTIFEK---KENINFT*NMR 388
           A++ +  YNLY+++F+    ++NINF  N R
Sbjct: 858 AVIDVHYYNLYNSMFDNYTVEQNINFVRNNR 888


>10_07_0108 - 12942031-12942048,12942167-12942357,12944659-12945307
          Length = 285

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +1

Query: 172 PLLGKKNFGVRPVFASIDKVNMLVDKAEGVNKVPSM 279
           PL       ++ V  +ID+ NM   +A+GV KVP M
Sbjct: 249 PLFTDLPMRIKKVERTIDEANMSYVRADGVAKVPLM 284


>08_02_1200 +
           25234208-25234370,25238527-25238819,25240003-25240243,
           25240523-25240855,25240940-25241025,25241133-25242575
          Length = 852

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +1

Query: 334 ILRFQGFFQQSLHEMRSASH--ILRKVDIFFFLEDGTIKVI 450
           +L F   F   +H++RS  H  +     IFF  +DGT++++
Sbjct: 418 MLDFHDLFLPYVHKIRSLKHTTMYGSRTIFFLTDDGTLRLL 458


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,554,287
Number of Sequences: 37544
Number of extensions: 243775
Number of successful extensions: 441
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 441
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)