Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10d11
(646 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 343 6e-95
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 343 6e-95
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 336 7e-93
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 220 7e-58
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 200 8e-52
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 182 3e-46
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 144 5e-35
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 143 1e-34
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 142 2e-34
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 141 4e-34
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 140 7e-34
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 140 9e-34
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 140 1e-33
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 111 6e-25
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 2e-24
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 106 2e-23
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 103 1e-22
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 8e-17
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 82 4e-16
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 77 2e-14
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 6e-12
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 66 2e-11
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 60 2e-09
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 2e-07
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 46 2e-05
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 42 6e-04
SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_40027| Best HMM Match : RVT_1 (HMM E-Value=3.8e-11) 30 1.4
SB_51928| Best HMM Match : HEAT (HMM E-Value=4.9e-22) 29 2.4
SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8) 29 4.3
SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4) 29 4.3
SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30) 29 4.3
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 9.9
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 27 9.9
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 343 bits (844), Expect = 6e-95
Identities = 161/181 (88%), Positives = 161/181 (88%)
Frame = +2
Query: 104 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 283
MREIVH Q GQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 284 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 463
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 464 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTVV 643
RKEAE CDCLQGFQ ISKIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 644 E 646
E
Sbjct: 181 E 181
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 343 bits (844), Expect = 6e-95
Identities = 160/182 (87%), Positives = 162/182 (89%)
Frame = +2
Query: 101 EMREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKY 280
+MREIVH Q GQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKY
Sbjct: 213 KMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKY 272
Query: 281 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 460
VPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV
Sbjct: 273 VPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 332
Query: 461 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTV 640
VRKEAE CDCLQGFQ ISKIREEYPDRIMNTFSVVPSPKVSDTV
Sbjct: 333 VRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTV 392
Query: 641 VE 646
VE
Sbjct: 393 VE 394
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 336 bits (827), Expect = 7e-93
Identities = 154/181 (85%), Positives = 161/181 (88%)
Frame = +2
Query: 104 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 283
MREIV +Q GQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 284 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 463
PR++L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVV 120
Query: 464 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTVV 643
RKEAE CDC+QGFQ ISKIREEYPDRIMNTFS+VPSPKVSDTVV
Sbjct: 121 RKEAESCDCIQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSIVPSPKVSDTVV 180
Query: 644 E 646
E
Sbjct: 181 E 181
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 220 bits (538), Expect = 7e-58
Identities = 104/125 (83%), Positives = 106/125 (84%)
Frame = +2
Query: 272 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 451
GKYVPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 452 LDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVS 631
LDVVRKEAE CDC+QGFQ I KIREEYPDRIMNTFSVVPSPKVS
Sbjct: 62 LDVVRKEAESCDCIQGFQLTHSLGGGTGSGMVTLLILKIREEYPDRIMNTFSVVPSPKVS 121
Query: 632 DTVVE 646
DTVVE
Sbjct: 122 DTVVE 126
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 200 bits (488), Expect = 8e-52
Identities = 90/92 (97%), Positives = 90/92 (97%)
Frame = +2
Query: 104 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 283
MREIVH Q GQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 284 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 379
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 182 bits (442), Expect = 3e-46
Identities = 81/121 (66%), Positives = 94/121 (77%)
Frame = +2
Query: 266 TGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 445
TGG+YVPR+ILVDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 446 SVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPK 625
++ DV+RKEAE CDC+QG Q +SKIREEYPDRI++ FSVVPSPK
Sbjct: 71 NIFDVLRKEAENCDCMQGVQLIQALGGGTGSGLGTLILSKIREEYPDRILSAFSVVPSPK 130
Query: 626 V 628
V
Sbjct: 131 V 131
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 144 bits (349), Expect = 5e-35
Identities = 73/183 (39%), Positives = 102/183 (55%), Gaps = 2/183 (1%)
Frame = +2
Query: 104 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 277
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 278 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 457
+VPRA+ VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 458 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDT 637
+RK A+ C LQGF + ++ +Y + F++ P+P+VS
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 638 VVE 646
VVE
Sbjct: 181 VVE 183
Score = 143 bits (346), Expect = 1e-34
Identities = 72/184 (39%), Positives = 102/184 (55%), Gaps = 2/184 (1%)
Frame = +2
Query: 101 EMREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGG 274
E RE + I GQ G QIG WE+ EHGI P G D + + N +++E G
Sbjct: 433 EERECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 492
Query: 275 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 454
K+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 493 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVL 552
Query: 455 DVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSD 634
D +RK A+ C LQGF + ++ +Y + F++ P+P+VS
Sbjct: 553 DRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVST 612
Query: 635 TVVE 646
VVE
Sbjct: 613 AVVE 616
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 143 bits (346), Expect = 1e-34
Identities = 68/183 (37%), Positives = 103/183 (56%), Gaps = 2/183 (1%)
Frame = +2
Query: 104 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 277
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 278 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 457
+VPRA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 458 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDT 637
+RK A+GC LQGF + ++ +Y + F++ P+P++S
Sbjct: 121 RLRKLADGCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTA 180
Query: 638 VVE 646
VVE
Sbjct: 181 VVE 183
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 142 bits (345), Expect = 2e-34
Identities = 71/183 (38%), Positives = 102/183 (55%), Gaps = 2/183 (1%)
Frame = +2
Query: 104 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 277
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 278 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 457
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 458 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDT 637
+RK A+ C LQGF + ++ +Y + F++ P+P+VS
Sbjct: 706 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTA 765
Query: 638 VVE 646
VVE
Sbjct: 766 VVE 768
Score = 140 bits (340), Expect = 7e-34
Identities = 69/182 (37%), Positives = 101/182 (55%), Gaps = 2/182 (1%)
Frame = +2
Query: 107 REIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGKY 280
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 281 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 460
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 126 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 185
Query: 461 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTV 640
+RK A+ C LQGF + ++ +Y + F++ P+P++S V
Sbjct: 186 IRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAV 245
Query: 641 VE 646
VE
Sbjct: 246 VE 247
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +2
Query: 107 REIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGKY 280
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 281 VPRAILVDLEPGTMDSV 331
VPRA+ VDLEP + +
Sbjct: 574 VPRAVFVDLEPTVRECI 590
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 141 bits (342), Expect = 4e-34
Identities = 70/182 (38%), Positives = 101/182 (55%), Gaps = 2/182 (1%)
Frame = +2
Query: 107 REIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGKY 280
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 281 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 460
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 461 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTV 640
+RK A+ C LQGF + ++ +Y + F++ P+P+VS V
Sbjct: 121 IRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 180
Query: 641 VE 646
VE
Sbjct: 181 VE 182
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 140 bits (340), Expect = 7e-34
Identities = 68/184 (36%), Positives = 102/184 (55%), Gaps = 2/184 (1%)
Frame = +2
Query: 101 EMREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGG 274
E RE V I GQ G Q+G WE+ EHGI P G D + + N +++E G
Sbjct: 418 EERECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 477
Query: 275 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 454
K+VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+VL
Sbjct: 478 KHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVL 537
Query: 455 DVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSD 634
D +RK A+ C LQGF + ++ +Y + F++ P+P++S
Sbjct: 538 DRIRKLADQCSGLQGFLVFHSFGGGTGSGFSALLLERLSVDYGKKSKLEFAIYPAPQIST 597
Query: 635 TVVE 646
VVE
Sbjct: 598 AVVE 601
Score = 122 bits (295), Expect = 2e-28
Identities = 59/168 (35%), Positives = 92/168 (54%), Gaps = 2/168 (1%)
Frame = +2
Query: 149 IGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGKYVPRAILVDLEPGTM 322
+G WE+ EHGI P G D + + N +++E GK+VPRA+ DLEP +
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 323 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGF 502
D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +RK A+ C LQGF
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQGF 120
Query: 503 QXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTVVE 646
+ ++ +Y + F++ P+P++S VVE
Sbjct: 121 LIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVE 168
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 140 bits (339), Expect = 9e-34
Identities = 70/182 (38%), Positives = 99/182 (54%), Gaps = 2/182 (1%)
Frame = +2
Query: 107 REIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGKY 280
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 281 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 460
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 461 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTV 640
+RK A+GC LQGF + ++ +Y + F++ P+P +S V
Sbjct: 493 LRKLADGCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPHISSAV 552
Query: 641 VE 646
VE
Sbjct: 553 VE 554
Score = 139 bits (336), Expect = 2e-33
Identities = 67/184 (36%), Positives = 101/184 (54%), Gaps = 2/184 (1%)
Frame = +2
Query: 101 EMREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGG 274
E RE + + GQ G Q+G WE+ EHGI P G D + + N +++E G
Sbjct: 804 EERECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 863
Query: 275 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 454
K+VPRA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 864 KHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVL 923
Query: 455 DVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSD 634
D +RK A+ C LQGF + ++ +Y + F++ P+P++S
Sbjct: 924 DRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQIST 983
Query: 635 TVVE 646
VVE
Sbjct: 984 AVVE 987
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 140 bits (338), Expect = 1e-33
Identities = 69/183 (37%), Positives = 101/183 (55%), Gaps = 2/183 (1%)
Frame = +2
Query: 104 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 277
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 278 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 457
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 458 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDT 637
RK A+ C LQGF + ++ +Y + F++ P+P++S
Sbjct: 121 RCRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQISTA 180
Query: 638 VVE 646
VVE
Sbjct: 181 VVE 183
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 111 bits (266), Expect = 6e-25
Identities = 64/183 (34%), Positives = 90/183 (49%), Gaps = 2/183 (1%)
Frame = +2
Query: 104 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 277
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 278 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 457
+VPRA+ VDLEP + P+ + G+ A NN+A+GHYT G + VD VLD
Sbjct: 61 HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 458 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDT 637
+RK A+ C LQGF + ++ +Y + F+V P+P ++
Sbjct: 111 RLRKLADQCSGLQGFFIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPHIASA 170
Query: 638 VVE 646
VVE
Sbjct: 171 VVE 173
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 109 bits (261), Expect = 2e-24
Identities = 50/137 (36%), Positives = 77/137 (56%)
Frame = +2
Query: 236 ERINVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 415
+ N ++ E GK+VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+G
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARG 71
Query: 416 HYTEGAELVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIM 595
HYT G E +D LD +RK A+ C LQGF + ++ +Y +
Sbjct: 72 HYTVGKEHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSK 131
Query: 596 NTFSVVPSPKVSDTVVE 646
F+V P+P++S VVE
Sbjct: 132 LEFAVYPAPQISTAVVE 148
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 106 bits (254), Expect = 2e-23
Identities = 50/130 (38%), Positives = 73/130 (56%)
Frame = +2
Query: 257 NEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 436
+EA GKYVPRA+LVDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 437 LVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVP 616
+V+ V+D +RK + C LQGF + +Y + F+V P
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQGFLIFHSFGGGTGSGFASLITEHLSVDYGKKSKLEFAVYP 1084
Query: 617 SPKVSDTVVE 646
+P +S VVE
Sbjct: 1085 APHISTAVVE 1094
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 103 bits (247), Expect = 1e-22
Identities = 48/88 (54%), Positives = 60/88 (68%)
Frame = +2
Query: 383 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXIS 562
Q+ A NNWAKG YTEGAEL+DS +D +RK AE CD +QGFQ +S
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLS 61
Query: 563 KIREEYPDRIMNTFSVVPSPKVSDTVVE 646
KIREEYPDR++++F V+PSP VS+TV E
Sbjct: 62 KIREEYPDRLVSSFCVLPSPLVSETVTE 89
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 84.2 bits (199), Expect = 8e-17
Identities = 39/108 (36%), Positives = 60/108 (55%)
Frame = +2
Query: 323 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGF 502
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 503 QXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTVVE 646
+ ++ +Y + F++ P+P++S VVE
Sbjct: 73 LIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVE 120
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 81.8 bits (193), Expect = 4e-16
Identities = 38/106 (35%), Positives = 59/106 (55%)
Frame = +2
Query: 329 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQX 508
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 62
Query: 509 XXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTVVE 646
+ ++ +Y + F++ P+P++S VVE
Sbjct: 63 FHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVE 108
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 76.6 bits (180), Expect = 2e-14
Identities = 36/106 (33%), Positives = 57/106 (53%)
Frame = +2
Query: 329 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQX 508
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK A+ C LQGF
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 509 XXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTVVE 646
+ ++ +Y + F+V P+P++S VVE
Sbjct: 63 FHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVE 108
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 68.1 bits (159), Expect = 6e-12
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +2
Query: 104 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQ--LERINVYYNEATGGK 277
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 278 YVPRAILVDLEPGTMDSVR 334
+VPRA+ VDLEP + ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 66.1 bits (154), Expect = 2e-11
Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 9/167 (5%)
Frame = +2
Query: 113 IVHIQGGQCGNQIGAKFWEVISDE------HGIDPTGTYHGDSDLQLERINVYYNEATGG 274
IV +Q GQCGNQIG + +++I ++ + T ++ + E + ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVEDATKLNSRFLCKELTTRSCTEYEEESLARFFTRENDD 62
Query: 275 KYVPRAILVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVD 445
RA+ +D+E + S G P F Q G+GNNWA G G + +D
Sbjct: 63 ILNARAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSID 122
Query: 446 SVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPD 586
VLD+V++E E CD L GF + +R+ YP+
Sbjct: 123 KVLDLVQREVEKCDRLDGFLTLLSLAGGTGSGVGAFVTNSLRDFYPN 169
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/62 (45%), Positives = 38/62 (61%)
Frame = +2
Query: 461 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTV 640
+RKEAE CD +QGFQ + ++EEYPDRI+++ SV PSP+VS+ V
Sbjct: 1 MRKEAEDCDAIQGFQLLHSLGGGTGSGLGTLILYHLQEEYPDRILSSVSVFPSPRVSEIV 60
Query: 641 VE 646
VE
Sbjct: 61 VE 62
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +2
Query: 329 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 469
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 329 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 469
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 46.4 bits (105), Expect = 2e-05
Identities = 48/174 (27%), Positives = 67/174 (38%), Gaps = 7/174 (4%)
Frame = +2
Query: 131 GQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAILVDLE 310
GQCGNQIG + ++ + P H D L R + VD E
Sbjct: 9 GQCGNQIGHELMTLVEKQCEGKPLS--HRDGKL-------------------RCVCVDSE 47
Query: 311 PGTMDSVR--SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVDSVLDVVRK 469
+ S R G GQ R N + G+ G GNN+A G++ G L+ +D +RK
Sbjct: 48 SKVIASNRRSDGVHGQ-NRDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMDAMRK 106
Query: 470 EAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVS 631
E E CD G + + + YP + + SV SP VS
Sbjct: 107 EVERCDSFAGTIVMHSLTGGTGSGLGARLVETLSDAYP--LAHVMSVAVSPHVS 158
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +2
Query: 71 KIHSII*FTKEMREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLER--- 241
+IH + + MRE + I GQ G QIG WE+ EHGI P G H SD +R
Sbjct: 185 EIHPLNCSIQTMRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDD 242
Query: 242 -INVYYNEATGGKY 280
+ +++E GK+
Sbjct: 243 SFSTFFSETASGKH 256
Score = 31.1 bits (67), Expect = 0.80
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 467 KEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTVVE 646
K A+ C LQGF + ++ +Y R F+V P+P++S VVE
Sbjct: 255 KHADQCTGLQGFLVFHSFGGGTGSGFSSLLMERLSVDYGKRSKLEFAVYPAPQISTAVVE 314
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 161 FWEVISDEHGIDPTGTYHG-DSDLQLERINVYYNE 262
FWEVI++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 41.5 bits (93), Expect = 6e-04
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 287 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 406
RA+L+D+E G ++++ GP +F + SG GNNW
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1059
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 557 ISKIREEYPDRIMNTFSVVPSPKVS 631
+ K++E+YPD I+++F + P K S
Sbjct: 484 LKKLQEQYPDHILSSFELFPCEKAS 508
>SB_40027| Best HMM Match : RVT_1 (HMM E-Value=3.8e-11)
Length = 587
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +2
Query: 107 REIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGD-SDLQLERINVYYNEATGGKYV 283
++I++IQG + ++W + G+ P + S LQLE N NE K +
Sbjct: 133 QQILYIQGRAAETRATQQWWSAVKPVAGMTPASGHESVLSHLQLEGYNEKSNEQELAKAI 192
Query: 284 PRAILVDLE 310
A L +E
Sbjct: 193 NSAFLEPME 201
>SB_51928| Best HMM Match : HEAT (HMM E-Value=4.9e-22)
Length = 1115
Score = 29.5 bits (63), Expect = 2.4
Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
Frame = +3
Query: 147 RLGLSSGKLYPMSMASIRPERITETPTSSWSASTCTI-TRRLEESTCLGLSLWT*SPGQW 323
R+G + P + S R R ETP S +T I T + + L + + T +PGQ
Sbjct: 189 RMGAETPGATP-TPGSKRRSRWDETPASQMGGTTPMIGTSGVTPAGALAMQMHTPTPGQL 247
Query: 324 TLYAPDHSVRSSVRTTLSLGNRVLATTGLRVTTPK 428
P+ + NRVL+ L PK
Sbjct: 248 VSMTPEQMQAYRWEREIDERNRVLSDDELNQLFPK 282
>SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8)
Length = 582
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +2
Query: 443 DSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPS 619
D+ D +R AE CD LQGFQ + +R+EY + M T VP+
Sbjct: 220 DNFEDGLRFFAEECDRLQGFQ-ILADVHNGFGGLMSQCLEDLRDEYNSKSMITVGCVPA 277
>SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4)
Length = 582
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +2
Query: 443 DSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPS 619
D+ D +R AE CD LQGFQ + +R+EY + M T VP+
Sbjct: 220 DNFEDGLRFFAEECDRLQGFQ-ILADVHNGFGGLMSQCLEDLRDEYNSKSMITVGCVPA 277
>SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30)
Length = 1280
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 201 PERITETPTSSWSASTCTITRRLEE 275
P R+ +TPT +W+ T T RLE+
Sbjct: 1125 PTRVRQTPTPAWNPYTDTDVNRLEQ 1149
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 28.3 bits (60), Expect = 5.7
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +3
Query: 183 SMASIRPERITET-PTSSWSASTCTITRRLEESTCLGLSLWT*SPGQWTLYAPDHSVRSS 359
S+A+ PE T + T++ +T ++ E+T S T +P T AP+ + S
Sbjct: 58 SLATTAPETTTASLVTTAPETTTASLATTAPETTTA--SFLTTAPEATT--APETTTASL 113
Query: 360 VRTTLSLGNRVLATTGLRVTT-PKA 431
V T LATT L VTT P+A
Sbjct: 114 VTTAPEATTASLATTALLVTTAPEA 138
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +2
Query: 173 ISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAILVDLEP 313
+ D G GD L L + +Y E G + V R + LEP
Sbjct: 792 VDDVRGCFQEALKEGDGQLTLNSLIEHYKELEGSEKVARELFAMLEP 838
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = +2
Query: 473 AEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTVVE 646
A+ C LQGF + ++ +Y + F++ P+P++S VVE
Sbjct: 1 ADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVE 58
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,083,554
Number of Sequences: 59808
Number of extensions: 418888
Number of successful extensions: 1109
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1633044375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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