Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10d11
(646 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 318 2e-87
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 315 1e-86
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 315 1e-86
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 314 3e-86
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 313 6e-86
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 313 6e-86
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 312 1e-85
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 312 2e-85
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 311 3e-85
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 147 5e-36
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 147 5e-36
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 145 2e-35
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 145 3e-35
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 145 3e-35
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 142 1e-34
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 142 1e-34
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 125 2e-29
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 125 3e-29
At4g37190.1 68417.m05265 expressed protein 33 0.16
At1g68720.1 68414.m07851 cytidine/deoxycytidylate deaminase fami... 32 0.37
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 30 1.1
At1g66730.1 68414.m07585 ATP dependent DNA ligase family protein... 29 3.5
At1g55690.3 68414.m06377 SEC14 cytosolic factor family protein /... 29 3.5
At1g55690.2 68414.m06376 SEC14 cytosolic factor family protein /... 29 3.5
At1g55690.1 68414.m06375 SEC14 cytosolic factor family protein /... 29 3.5
At5g45380.1 68418.m05577 sodium:solute symporter family protein ... 28 6.1
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 28 6.1
At1g67530.1 68414.m07694 armadillo/beta-catenin repeat family pr... 28 6.1
At1g46984.1 68414.m05220 F-box protein-related contains weak hit... 28 6.1
At1g27070.1 68414.m03300 5'-AMP-activated protein kinase-related... 28 6.1
At2g33640.1 68415.m04124 zinc finger (DHHC type) family protein ... 27 8.1
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 318 bits (782), Expect = 2e-87
Identities = 145/182 (79%), Positives = 159/182 (87%), Gaps = 1/182 (0%)
Frame = +2
Query: 104 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDS-DLQLERINVYYNEATGGKY 280
MREI+H+QGGQCGNQIG+KFWEVI DEHG+DPTG Y+GDS DLQLERINVYYNEA+GG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 281 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 460
VPRA+L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 461 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTV 640
VRKEAE CDCLQGFQ ISKIREEYPDR+M TFSV PSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 641 VE 646
VE
Sbjct: 181 VE 182
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 315 bits (774), Expect = 1e-86
Identities = 144/181 (79%), Positives = 157/181 (86%)
Frame = +2
Query: 104 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 283
MREI+HIQGGQCGNQIG+KFWEV+ DEHGIDPTG Y G+SDLQLER+NVYYNEA+ G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 284 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 463
PRAIL+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 464 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTVV 643
RKEAE CDCLQGFQ ISKIREEYPDR+M TFSV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 644 E 646
E
Sbjct: 181 E 181
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 315 bits (774), Expect = 1e-86
Identities = 146/182 (80%), Positives = 157/182 (86%), Gaps = 1/182 (0%)
Frame = +2
Query: 104 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDS-DLQLERINVYYNEATGGKY 280
MREI+HIQGGQCGNQIG+KFWEVI DEHGID TG Y GD+ DLQLERINVYYNEA+GG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 281 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 460
VPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 461 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTV 640
VRKEAE CDCLQGFQ ISKIREEYPDR+M TFSV PSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 641 VE 646
VE
Sbjct: 181 VE 182
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 314 bits (771), Expect = 3e-86
Identities = 146/181 (80%), Positives = 155/181 (85%)
Frame = +2
Query: 104 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 283
MREI+HIQGGQCGNQIGAKFWEVI EHGID TG GD+DLQLERINVY+NEA+GGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 284 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 463
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 464 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTVV 643
RKEAE CDCLQGFQ ISKIREEYPDR+M TFSV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 644 E 646
E
Sbjct: 181 E 181
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 313 bits (769), Expect = 6e-86
Identities = 144/181 (79%), Positives = 155/181 (85%)
Frame = +2
Query: 104 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 283
MREI+HIQGGQCGNQIGAKFWEV+ EHGIDPTG Y GDSDLQLERINVYYNEA+ G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 284 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 463
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 464 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTVV 643
RKEAE CDCLQGFQ ISKIREEYPDR+M TFSV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 644 E 646
E
Sbjct: 181 E 181
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 313 bits (769), Expect = 6e-86
Identities = 144/181 (79%), Positives = 155/181 (85%)
Frame = +2
Query: 104 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 283
MREI+HIQGGQCGNQIGAKFWEV+ EHGIDPTG Y GDSDLQLERINVYYNEA+ G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 284 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 463
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 464 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTVV 643
RKEAE CDCLQGFQ ISKIREEYPDR+M TFSV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 644 E 646
E
Sbjct: 181 E 181
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 312 bits (767), Expect = 1e-85
Identities = 146/181 (80%), Positives = 155/181 (85%)
Frame = +2
Query: 104 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 283
MREI+HIQGGQCGNQIGAKFWEVI DEHGID TG Y GDS LQLERI+VY+NEA+GGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 284 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 463
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 464 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTVV 643
RKEAE DCLQGFQ ISKIREEYPDR+M TFSV PSPKVSDTVV
Sbjct: 121 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 644 E 646
E
Sbjct: 181 E 181
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 312 bits (765), Expect = 2e-85
Identities = 143/181 (79%), Positives = 156/181 (86%)
Frame = +2
Query: 104 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 283
MREI+HIQGGQCGNQIG+KFWEV++ EHGID TG Y GDS+LQLER+NVYYNEA+ G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 284 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 463
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 464 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTVV 643
RKEAE CDCLQGFQ ISKIREEYPDR+M TFSV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 644 E 646
E
Sbjct: 181 E 181
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 311 bits (763), Expect = 3e-85
Identities = 142/181 (78%), Positives = 155/181 (85%)
Frame = +2
Query: 104 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 283
MREI+HIQGGQCGNQIGAKFWEV+ EHGID TG Y G++DLQLER+NVYYNEA+ G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 284 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 463
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 464 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTVV 643
RKEAE CDCLQGFQ ISKIREEYPDR+M TFSV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 644 E 646
E
Sbjct: 181 E 181
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 147 bits (357), Expect = 5e-36
Identities = 73/183 (39%), Positives = 104/183 (56%), Gaps = 2/183 (1%)
Frame = +2
Query: 104 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 277
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 278 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 457
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 458 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDT 637
VRK A+ C LQGF + ++ +Y + F++ PSP+VS
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 638 VVE 646
VVE
Sbjct: 181 VVE 183
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 147 bits (357), Expect = 5e-36
Identities = 73/183 (39%), Positives = 104/183 (56%), Gaps = 2/183 (1%)
Frame = +2
Query: 104 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 277
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 278 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 457
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 458 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDT 637
VRK A+ C LQGF + ++ +Y + F++ PSP+VS
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 638 VVE 646
VVE
Sbjct: 181 VVE 183
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 145 bits (352), Expect = 2e-35
Identities = 70/183 (38%), Positives = 106/183 (57%), Gaps = 2/183 (1%)
Frame = +2
Query: 104 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 277
MREI+ I GQ G Q+G WE+ EHGI P GT DS + + N +++E + G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 278 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 457
+VPRA+ +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 458 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDT 637
+RK A+ C LQGF + ++ ++ + F++ PSP+VS
Sbjct: 121 RLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTA 180
Query: 638 VVE 646
VVE
Sbjct: 181 VVE 183
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 145 bits (351), Expect = 3e-35
Identities = 73/183 (39%), Positives = 103/183 (56%), Gaps = 2/183 (1%)
Frame = +2
Query: 104 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 277
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 278 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 457
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 458 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDT 637
+RK A+ C LQGF + ++ +Y + F+V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 638 VVE 646
VVE
Sbjct: 181 VVE 183
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 145 bits (351), Expect = 3e-35
Identities = 73/183 (39%), Positives = 103/183 (56%), Gaps = 2/183 (1%)
Frame = +2
Query: 104 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 277
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 278 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 457
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 458 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDT 637
+RK A+ C LQGF + ++ +Y + F+V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 638 VVE 646
VVE
Sbjct: 181 VVE 183
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 142 bits (345), Expect = 1e-34
Identities = 72/183 (39%), Positives = 102/183 (55%), Gaps = 2/183 (1%)
Frame = +2
Query: 104 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 277
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 278 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 457
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 458 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDT 637
+RK A+ C LQGF + ++ +Y + F+V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 638 VVE 646
VVE
Sbjct: 181 VVE 183
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 142 bits (345), Expect = 1e-34
Identities = 72/183 (39%), Positives = 102/183 (55%), Gaps = 2/183 (1%)
Frame = +2
Query: 104 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 277
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 278 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 457
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 458 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDT 637
+RK A+ C LQGF + ++ +Y + F+V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 638 VVE 646
VVE
Sbjct: 181 VVE 183
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 125 bits (302), Expect = 2e-29
Identities = 60/183 (32%), Positives = 103/183 (56%), Gaps = 3/183 (1%)
Frame = +2
Query: 107 REIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP 286
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 287 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 460
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 461 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSP-KVSDT 637
+ +EA+G D L+GF + + + Y +++ T+SV P+ + SD
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
Query: 638 VVE 646
VV+
Sbjct: 182 VVQ 184
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 125 bits (301), Expect = 3e-29
Identities = 60/183 (32%), Positives = 103/183 (56%), Gaps = 3/183 (1%)
Frame = +2
Query: 107 REIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP 286
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 287 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 460
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 461 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSP-KVSDT 637
+ +EA+G D L+GF + + + Y +++ T+SV P+ + SD
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
Query: 638 VVE 646
VV+
Sbjct: 182 VVQ 184
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 33.1 bits (72), Expect = 0.16
Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Frame = +2
Query: 104 MREIVHIQGGQCGNQIGAKFWEVISDEHGI------DPTGTYHG-DSDLQLERINVYYNE 262
MREIV IQ G+ N +G+ FW + G+ DP H D D+
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 263 ATGGKYVPRAILVDLEP--GTMDS 328
AT Y PR + V+L+ GTM S
Sbjct: 61 AT---YTPRLVSVNLKGALGTMSS 81
>At1g68720.1 68414.m07851 cytidine/deoxycytidylate deaminase family
protein contains Pfam profile PF00383: Cytidine and
deoxycytidylate deaminase zinc-binding region
Length = 1307
Score = 31.9 bits (69), Expect = 0.37
Identities = 23/88 (26%), Positives = 38/88 (43%)
Frame = -1
Query: 424 GVVTLSPVVASTRLPKDKVVRTEDLTEWSGAYRVHCPGL*VHKDSPRHVLSSSRLVIVHV 245
G V+ + +L ++K V + EW AY+V V + R L ++
Sbjct: 1069 GSVSADSALIQRKLQRNKQVVRDSFEEWEEAYKVEAERRTVDEIFMREALVEAKKA---A 1125
Query: 244 DALQLEVGVSVIRSGRIDAMLIGYNFPE 161
D ++ VG ++ G+I A GYN E
Sbjct: 1126 DTWEVPVGAVLVHDGKIIAR--GYNLVE 1151
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +2
Query: 437 LVDSVLDVVRKEAEGCDCLQGF 502
+++SV VVRKEAE C+CLQ F
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At1g66730.1 68414.m07585 ATP dependent DNA ligase family protein
contains Pfam profile: PF01068 ATP dependent DNA ligase
domain
Length = 1417
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 123 SKEVNAETRLGLSSGKLYPMSMASIRPERITETPTSS 233
S N+ET L L++ KLY +++SI P+ + PTSS
Sbjct: 15 SNSDNSET-LNLNTTKLYSSAISSISPQFPSPKPTSS 50
>At1g55690.3 68414.m06377 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
similar to phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus] and Phosphatidylinositol
Transfer Protein GB:2780955 GI:2780955 [Saccharomyces
cerevisiae]
Length = 621
Score = 28.7 bits (61), Expect = 3.5
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -1
Query: 172 NFPELSPNLVSALTSLDMNYFPHFFCKLY 86
NF + NLV+A++ +D +Y+P ++Y
Sbjct: 230 NFTPTAANLVAAMSKIDNSYYPETLHRMY 258
>At1g55690.2 68414.m06376 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
similar to phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus] and Phosphatidylinositol
Transfer Protein GB:2780955 GI:2780955 [Saccharomyces
cerevisiae]
Length = 625
Score = 28.7 bits (61), Expect = 3.5
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -1
Query: 172 NFPELSPNLVSALTSLDMNYFPHFFCKLY 86
NF + NLV+A++ +D +Y+P ++Y
Sbjct: 230 NFTPTAANLVAAMSKIDNSYYPETLHRMY 258
>At1g55690.1 68414.m06375 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
similar to phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus] and Phosphatidylinositol
Transfer Protein GB:2780955 GI:2780955 [Saccharomyces
cerevisiae]
Length = 625
Score = 28.7 bits (61), Expect = 3.5
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -1
Query: 172 NFPELSPNLVSALTSLDMNYFPHFFCKLY 86
NF + NLV+A++ +D +Y+P ++Y
Sbjct: 230 NFTPTAANLVAAMSKIDNSYYPETLHRMY 258
>At5g45380.1 68418.m05577 sodium:solute symporter family protein
contains Pfam profile: PF00474 sodium:solute symporter
family
Length = 694
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 202 GRIDAMLIGYNFPELSPNLVSALTSLDMNY 113
GR+D G N P L+ NLV+ LT NY
Sbjct: 513 GRVDLDSTGKNGPMLAGNLVAILTVRPQNY 542
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +2
Query: 152 GAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAILV 301
G + W I+ + TG Y DL ER+++ +++A +Y P ++
Sbjct: 45 GPEGWGKINPHWKVCNTGRYQSPIDLTNERVSLIHDQAWTRQYKPAPAVI 94
>At1g67530.1 68414.m07694 armadillo/beta-catenin repeat family
protein / U-box domain-containing family protein
contains Pfam domain, PF00514:
Armadillo/beta-catenin-like repeats and Pfam, PF04564:
U-box domain
Length = 782
Score = 27.9 bits (59), Expect = 6.1
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -1
Query: 295 DSPRHVLSSSRLVIVHVDALQLEVGVSVIRSGRIDAMLIGYNFPELSPNLVSALTS 128
D + V+ SS+ V V LQ E+ ++DA+ YN SPN+ + L+S
Sbjct: 541 DEAKSVIGSSQAVPFLVQLLQKEIETQC----KLDALHALYNLSTYSPNIPALLSS 592
>At1g46984.1 68414.m05220 F-box protein-related contains weak hit to
Pfam PF00646: F-box domain; contains weak hit to TIGRFAM
TIGR01640 : F-box protein interaction domain
Length = 370
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 268 WRKVRASGYPCGPRARDNGLC 330
WRK+ S YP PR + NG+C
Sbjct: 202 WRKIEYS-YPHYPRKKSNGIC 221
>At1g27070.1 68414.m03300 5'-AMP-activated protein kinase-related
contains weak similarity to Swiss-Prot:Q9QZH4
5'-AMP-activated protein kinase, beta-2 subunit (AMPK
beta-2 chain) [Rattus norvegicus]
Length = 532
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -1
Query: 460 YIEHRIYQLCAFGVVTLSPVVASTRLPKDKVVRTEDLTEWSG 335
+I+HR+ QL + LS V+ S R P DKVV ++D +G
Sbjct: 350 HIKHRLQQLQS----ELSSVLHSLRSPPDKVVTSKDSETTAG 387
>At2g33640.1 68415.m04124 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 565
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -1
Query: 496 LQTVATFSFFSDYIEHRIYQLCAFGV 419
L TVA ++FF+ ++ +++Y+ A GV
Sbjct: 24 LLTVAYYAFFAPFLGNKLYEYIAIGV 49
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,069,022
Number of Sequences: 28952
Number of extensions: 294865
Number of successful extensions: 853
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1334473344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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