Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10d09
(616 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U66875-1|AAC51328.1| 97|Homo sapiens cytochrome oxidase subuni... 70 6e-12
BC029818-1|AAH29818.1| 97|Homo sapiens cytochrome c oxidase su... 70 6e-12
M83308-1|AAA52062.1| 97|Homo sapiens cytochrome c oxidase subu... 68 3e-11
AF020589-1|AAC98895.1| 86|Homo sapiens cytochrome C oxidase su... 65 2e-10
X15341-1|CAA33392.1| 86|Homo sapiens protein ( Human COX VIa-L... 60 8e-09
U83702-1|AAD00554.1| 86|Homo sapiens cytochrome c oxidase subu... 60 8e-09
BC107861-1|AAI07862.1| 109|Homo sapiens cytochrome c oxidase su... 60 8e-09
BC070186-1|AAH70186.1| 109|Homo sapiens cytochrome c oxidase su... 60 8e-09
BC007723-1|AAH07723.1| 109|Homo sapiens cytochrome c oxidase su... 60 8e-09
AL160264-2|CAI20472.1| 109|Homo sapiens protein ( Human DNA seq... 60 8e-09
AL021546-1|CAA16494.1| 109|Homo sapiens cytochrome c oxidase su... 60 8e-09
AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens ... 34 0.35
M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen ... 33 0.61
D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein pr... 33 1.1
AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing ... 33 1.1
AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA 1... 33 1.1
BC131611-1|AAI31612.1| 298|Homo sapiens keratin associated prot... 31 2.4
AB076359-1|BAD01546.1| 298|Homo sapiens keratin associated prot... 31 2.4
AK128066-1|BAC87258.1| 652|Homo sapiens protein ( Homo sapiens ... 31 4.3
U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5 ... 30 5.6
U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5 ... 30 5.6
M90464-1|AAA52046.1| 910|Homo sapiens alpha-5 type IV collagen ... 30 5.6
BC035387-1|AAH35387.1| 695|Homo sapiens COL4A5 protein protein. 30 5.6
AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha ... 30 5.6
AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha ... 30 5.6
AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha ... 30 5.6
AB209155-1|BAD92392.1| 699|Homo sapiens serine/threonine kinase... 30 7.5
DQ496103-1|ABF47092.1| 459|Homo sapiens heme carrier protein 1 ... 29 9.9
BC010691-1|AAH10691.1| 431|Homo sapiens SLC46A1 protein protein. 29 9.9
AY151035-1|AAN73261.1| 112|Homo sapiens dopamine receptor D4 pr... 29 9.9
AL832613-1|CAD89945.1| 261|Homo sapiens hypothetical protein pr... 29 9.9
AK054669-1|BAB70789.1| 459|Homo sapiens protein ( Homo sapiens ... 29 9.9
>U66875-1|AAC51328.1| 97|Homo sapiens cytochrome oxidase subunit
VIa heart isoform precursor protein.
Length = 97
Score = 70.1 bits (164), Expect = 6e-12
Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Frame = +3
Query: 279 HGKDTWKKYRNFTYFVLLPLIAIQSFNAL---GHEPPPKGPCRDYEYMRVRTKRFPWGDG 449
HG + +R T+ + LP +A+ +FN+ GH P P+ R Y+++R+RTK +PWGDG
Sbjct: 20 HGGAGARTWRLLTFVLALPSVALCTFNSYLHSGHRPRPE--FRPYQHLRIRTKPYPWGDG 77
Query: 450 VKSFYHNEHVNHLPGECEAP 509
+ +HN HVN LP E P
Sbjct: 78 NHTLFHNSHVNPLPTGYEHP 97
>BC029818-1|AAH29818.1| 97|Homo sapiens cytochrome c oxidase
subunit VIa polypeptide 2 protein.
Length = 97
Score = 70.1 bits (164), Expect = 6e-12
Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Frame = +3
Query: 279 HGKDTWKKYRNFTYFVLLPLIAIQSFNAL---GHEPPPKGPCRDYEYMRVRTKRFPWGDG 449
HG + +R T+ + LP +A+ +FN+ GH P P+ R Y+++R+RTK +PWGDG
Sbjct: 20 HGGAGARTWRLLTFVLALPSVALCTFNSYLHSGHRPRPE--FRPYQHLRIRTKPYPWGDG 77
Query: 450 VKSFYHNEHVNHLPGECEAP 509
+ +HN HVN LP E P
Sbjct: 78 NHTLFHNSHVNPLPTGYEHP 97
>M83308-1|AAA52062.1| 97|Homo sapiens cytochrome c oxidase subunit
VIa protein.
Length = 97
Score = 67.7 bits (158), Expect = 3e-11
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +3
Query: 279 HGKDTWKKYRNFTYFVLLPLIAIQSFNALGHEPPPKGP-CRDYEYMRVRTKRFPWGDGVK 455
HG + +R T+ + LP +A+ +FN+ H + P R Y+++R+RTK +PWGDG
Sbjct: 20 HGGAGARTWRLLTFVLALPSVALCTFNSYLHSGHRERPEFRPYQHLRIRTKPYPWGDGNH 79
Query: 456 SFYHNEHVNHLPGECEAP 509
+ +HN HVN LP E P
Sbjct: 80 TLFHNSHVNPLPTGYEHP 97
>AF020589-1|AAC98895.1| 86|Homo sapiens cytochrome C oxidase
subunit VIa homolog protein.
Length = 86
Score = 64.9 bits (151), Expect = 2e-10
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Frame = +3
Query: 279 HGKD-TWKKYRNFTYFVLLPLIAIQSFNAL---GHEPPPKGPCRDYEYMRVRTKRFPWGD 446
HG++ + + ++ TYFV LP + + N HE + P Y ++R+RTK FPWGD
Sbjct: 6 HGEEGSARMWKALTYFVALPGVGVSMLNVFLKSRHEEHERPPFVAYPHLRIRTKPFPWGD 65
Query: 447 GVKSFYHNEHVNHLP 491
G + +HN HVN LP
Sbjct: 66 GNHTLFHNPHVNPLP 80
>X15341-1|CAA33392.1| 86|Homo sapiens protein ( Human COX VIa-L
mRNA for cytochrome c oxidase liver-specific subunitVIa
(EC 1.9.3.1). ).
Length = 86
Score = 59.7 bits (138), Expect = 8e-09
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Frame = +3
Query: 279 HGKD-TWKKYRNFTYFVLLPLIAIQSFNAL--GHEPPPKGP-CRDYEYMRVRTKRFPWGD 446
HG++ + + ++ T+FV LP +A+ N H + P Y ++R+RTK FPWGD
Sbjct: 6 HGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHERPEFIAYPHLRIRTKPFPWGD 65
Query: 447 GVKSFYHNEHVNHLP 491
G + +HN HVN LP
Sbjct: 66 GNHTLFHNPHVNPLP 80
>U83702-1|AAD00554.1| 86|Homo sapiens cytochrome c oxidase subunit
VIa protein.
Length = 86
Score = 59.7 bits (138), Expect = 8e-09
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Frame = +3
Query: 279 HGKD-TWKKYRNFTYFVLLPLIAIQSFNAL--GHEPPPKGP-CRDYEYMRVRTKRFPWGD 446
HG++ + + ++ T+FV LP +A+ N H + P Y ++R+RTK FPWGD
Sbjct: 6 HGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHERPEFIAYPHLRIRTKPFPWGD 65
Query: 447 GVKSFYHNEHVNHLP 491
G + +HN HVN LP
Sbjct: 66 GNHTLFHNPHVNPLP 80
>BC107861-1|AAI07862.1| 109|Homo sapiens cytochrome c oxidase
subunit VIa polypeptide 1 protein.
Length = 109
Score = 59.7 bits (138), Expect = 8e-09
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Frame = +3
Query: 279 HGKD-TWKKYRNFTYFVLLPLIAIQSFNAL--GHEPPPKGP-CRDYEYMRVRTKRFPWGD 446
HG++ + + ++ T+FV LP +A+ N H + P Y ++R+RTK FPWGD
Sbjct: 29 HGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHERPEFIAYPHLRIRTKPFPWGD 88
Query: 447 GVKSFYHNEHVNHLP 491
G + +HN HVN LP
Sbjct: 89 GNHTLFHNPHVNPLP 103
>BC070186-1|AAH70186.1| 109|Homo sapiens cytochrome c oxidase
subunit VIa polypeptide 1 protein.
Length = 109
Score = 59.7 bits (138), Expect = 8e-09
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Frame = +3
Query: 279 HGKD-TWKKYRNFTYFVLLPLIAIQSFNAL--GHEPPPKGP-CRDYEYMRVRTKRFPWGD 446
HG++ + + ++ T+FV LP +A+ N H + P Y ++R+RTK FPWGD
Sbjct: 29 HGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHERPEFIAYPHLRIRTKPFPWGD 88
Query: 447 GVKSFYHNEHVNHLP 491
G + +HN HVN LP
Sbjct: 89 GNHTLFHNPHVNPLP 103
>BC007723-1|AAH07723.1| 109|Homo sapiens cytochrome c oxidase
subunit VIa polypeptide 1 protein.
Length = 109
Score = 59.7 bits (138), Expect = 8e-09
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Frame = +3
Query: 279 HGKD-TWKKYRNFTYFVLLPLIAIQSFNAL--GHEPPPKGP-CRDYEYMRVRTKRFPWGD 446
HG++ + + ++ T+FV LP +A+ N H + P Y ++R+RTK FPWGD
Sbjct: 29 HGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHERPEFIAYPHLRIRTKPFPWGD 88
Query: 447 GVKSFYHNEHVNHLP 491
G + +HN HVN LP
Sbjct: 89 GNHTLFHNPHVNPLP 103
>AL160264-2|CAI20472.1| 109|Homo sapiens protein ( Human DNA
sequence from clone RP3-405J24 on chromosome 6 Contains
the FDG2 gene for FGD1 family member 2, the gene for a
novel protein ).
Length = 109
Score = 59.7 bits (138), Expect = 8e-09
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Frame = +3
Query: 279 HGKD-TWKKYRNFTYFVLLPLIAIQSFNAL--GHEPPPKGP-CRDYEYMRVRTKRFPWGD 446
HG++ + + ++ T+FV LP +A+ N H + P Y ++R+RTK FPWGD
Sbjct: 29 HGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHERPEFIAYPHLRIRTKPFPWGD 88
Query: 447 GVKSFYHNEHVNHLP 491
G + +HN HVN LP
Sbjct: 89 GNHTLFHNPHVNPLP 103
>AL021546-1|CAA16494.1| 109|Homo sapiens cytochrome c oxidase
subunit VIa polypeptide 1 protein.
Length = 109
Score = 59.7 bits (138), Expect = 8e-09
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Frame = +3
Query: 279 HGKD-TWKKYRNFTYFVLLPLIAIQSFNAL--GHEPPPKGP-CRDYEYMRVRTKRFPWGD 446
HG++ + + ++ T+FV LP +A+ N H + P Y ++R+RTK FPWGD
Sbjct: 29 HGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHERPEFIAYPHLRIRTKPFPWGD 88
Query: 447 GVKSFYHNEHVNHLP 491
G + +HN HVN LP
Sbjct: 89 GNHTLFHNPHVNPLP 103
>AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens
cDNA FLJ39651 fis, clone SMINT2005161, highly similar to
Mus musculus ES18 mRNA. ).
Length = 485
Score = 34.3 bits (75), Expect = 0.35
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 159 PPRPSKCGCPPKPGSGKVIVPPADCKPGP 245
PP P+ GCPP P PP +PGP
Sbjct: 19 PPPPAPFGCPPPPLPSPAFPPPLPQRPGP 47
>M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen
protein.
Length = 1604
Score = 33.5 bits (73), Expect = 0.61
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Frame = +3
Query: 147 SLCGPP----RPSKCGCPPKPGSGKVIVPPAD--CKPGP 245
S+ GPP +P G P PG G +PP+D C+PGP
Sbjct: 336 SIPGPPGLDGQPGAPGLPGPPGPGSPHIPPSDEICEPGP 374
>D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein
protein.
Length = 5405
Score = 32.7 bits (71), Expect = 1.1
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +3
Query: 141 RYSLCGPPRPSKC--GCPPKPGSGKVIVPPADCKPGPICY-NPCVP 269
RY LCGP P+ C P SG+ V C PG + CVP
Sbjct: 750 RYELCGPACPTSCNGAAAPSNCSGRPCVEGCVCLPGFVASGGACVP 795
>AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing 4
protein.
Length = 1362
Score = 32.7 bits (71), Expect = 1.1
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = +3
Query: 162 PRPSKCGCPPKPGSGKVIVPPADCKPGPICYNPCVPRFHHGKDTWK--KYRNFTYFVLLP 335
P P + PP P G+ PP KP + + PR HH D + R +++
Sbjct: 1011 PPPPQGQQPPHPPPGQQPPPPQPAKPQQVIQHHHSPR-HHKSDPYSTGHLREAPSPLMIH 1069
Query: 336 LIAIQSFNALGHEPPPK 386
+ F +L H+ PP+
Sbjct: 1070 SPQMSQFQSLTHQSPPQ 1086
>AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA
1-2843] protein.
Length = 2843
Score = 32.7 bits (71), Expect = 1.1
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +3
Query: 141 RYSLCGPPRPSKC--GCPPKPGSGKVIVPPADCKPGPICY-NPCVP 269
RY LCGP P+ C P SG+ V C PG + CVP
Sbjct: 750 RYELCGPACPTSCNGAAAPSNCSGRPCVEGCVCLPGFVASGGACVP 795
>BC131611-1|AAI31612.1| 298|Homo sapiens keratin associated protein
10-11 protein.
Length = 298
Score = 31.5 bits (68), Expect = 2.4
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +3
Query: 120 WTVEKARRYSLCGPPRPSKCGCPPKPGSGKVIVPPADCKPGPICYNPCVP 269
W V+ S C PP + C P P S ++ P C P C C P
Sbjct: 17 WQVDDCPE-SCCEPPCSAPSCCAPAP-SLSLVCTPVSCVSSPCCQAACEP 64
>AB076359-1|BAD01546.1| 298|Homo sapiens keratin associated protein
protein.
Length = 298
Score = 31.5 bits (68), Expect = 2.4
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +3
Query: 120 WTVEKARRYSLCGPPRPSKCGCPPKPGSGKVIVPPADCKPGPICYNPCVP 269
W V+ S C PP + C P P S ++ P C P C C P
Sbjct: 17 WQVDDCPE-SCCEPPCSAPSCCAPAP-SLSLVCTPVSCVSSPCCQAACEP 64
>AK128066-1|BAC87258.1| 652|Homo sapiens protein ( Homo sapiens
cDNA FLJ46186 fis, clone TESTI4005013. ).
Length = 652
Score = 30.7 bits (66), Expect = 4.3
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +3
Query: 147 SLCGPPRPSKCGCPPKPGSGKVIVPPADCKPGPICYNPCV 266
SL P+ + G PKP PP C GP C P +
Sbjct: 323 SLVNTPQHTPSG-QPKPAKAHTCPPPPSCLSGPSCMQPYI 361
>U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5
chain protein.
Length = 1685
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Frame = +3
Query: 147 SLCGPP----RPSKCGCPPKPGSGKVIVPPAD--CKPGP 245
S+ GPP +P G P PG +PP+D C+PGP
Sbjct: 417 SIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGP 455
>U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5
chain protein.
Length = 1691
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Frame = +3
Query: 147 SLCGPP----RPSKCGCPPKPGSGKVIVPPAD--CKPGP 245
S+ GPP +P G P PG +PP+D C+PGP
Sbjct: 417 SIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGP 455
>M90464-1|AAA52046.1| 910|Homo sapiens alpha-5 type IV collagen
protein.
Length = 910
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Frame = +3
Query: 147 SLCGPP----RPSKCGCPPKPGSGKVIVPPAD--CKPGP 245
S+ GPP +P G P PG +PP+D C+PGP
Sbjct: 417 SIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGP 455
>BC035387-1|AAH35387.1| 695|Homo sapiens COL4A5 protein protein.
Length = 695
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Frame = +3
Query: 147 SLCGPP----RPSKCGCPPKPGSGKVIVPPAD--CKPGP 245
S+ GPP +P G P PG +PP+D C+PGP
Sbjct: 25 SIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGP 63
>AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Frame = +3
Query: 147 SLCGPP----RPSKCGCPPKPGSGKVIVPPAD--CKPGP 245
S+ GPP +P G P PG +PP+D C+PGP
Sbjct: 417 SIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGP 455
>AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Frame = +3
Query: 147 SLCGPP----RPSKCGCPPKPGSGKVIVPPAD--CKPGP 245
S+ GPP +P G P PG +PP+D C+PGP
Sbjct: 417 SIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGP 455
>AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Frame = +3
Query: 147 SLCGPP----RPSKCGCPPKPGSGKVIVPPAD--CKPGP 245
S+ GPP +P G P PG +PP+D C+PGP
Sbjct: 417 SIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGP 455
>AB209155-1|BAD92392.1| 699|Homo sapiens serine/threonine kinase 23
variant protein.
Length = 699
Score = 29.9 bits (64), Expect = 7.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 186 PPKPGSGKVIVPPADCKPGPICYNPCVPRFHHGK 287
PP P S K+ + P D +P + PC R H K
Sbjct: 2 PPNPISPKLHIKPTDTRPLVLALEPCGSRGQHVK 35
>DQ496103-1|ABF47092.1| 459|Homo sapiens heme carrier protein 1
protein.
Length = 459
Score = 29.5 bits (63), Expect = 9.9
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +1
Query: 118 FGQ-LKKPDAT-VFVVHHVQANAAVLQSLAVEKSSCHRLIASLDRFVIIPVFLDFTTVKT 291
FG+ LK+P +T +F H ++ + + A EKS H + SL FV+I V + T
Sbjct: 230 FGETLKEPKSTRLFTFRHHRSIVQLYVAPAPEKSRKHLALYSLAIFVVITVHFGAQDILT 289
Query: 292 L 294
L
Sbjct: 290 L 290
>BC010691-1|AAH10691.1| 431|Homo sapiens SLC46A1 protein protein.
Length = 431
Score = 29.5 bits (63), Expect = 9.9
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +1
Query: 118 FGQ-LKKPDAT-VFVVHHVQANAAVLQSLAVEKSSCHRLIASLDRFVIIPVFLDFTTVKT 291
FG+ LK+P +T +F H ++ + + A EKS H + SL FV+I V + T
Sbjct: 230 FGETLKEPKSTRLFTFRHHRSIVQLYVAPAPEKSRKHLALYSLAIFVVITVHFGAQDILT 289
Query: 292 L 294
L
Sbjct: 290 L 290
>AY151035-1|AAN73261.1| 112|Homo sapiens dopamine receptor D4
protein.
Length = 112
Score = 29.5 bits (63), Expect = 9.9
Identities = 22/53 (41%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
Frame = +3
Query: 153 CGPP-RPSKCGCPPKPGSGKVIVPPADCKP----GPICY--NPCVPRFHHGKD 290
CGP P+ G PP P G PPA P GP C PC+PR G D
Sbjct: 26 CGPDCAPAAPGLPPDP-CGPDCAPPAPGLPQDPCGPDCAPPAPCLPRGPCGPD 77
Score = 29.5 bits (63), Expect = 9.9
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +3
Query: 153 CGPPRPSKCGCPPKPGSGKVIVPPADCKPGPICYNPCVP 269
C PP P G P P G PPA C P C C P
Sbjct: 46 CAPPAP---GLPQDP-CGPDCAPPAPCLPRGPCGPDCAP 80
>AL832613-1|CAD89945.1| 261|Homo sapiens hypothetical protein
protein.
Length = 261
Score = 29.5 bits (63), Expect = 9.9
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +1
Query: 118 FGQ-LKKPDAT-VFVVHHVQANAAVLQSLAVEKSSCHRLIASLDRFVIIPVFLDFTTVKT 291
FG+ LK+P +T +F H ++ + + A EKS H + SL FV+I V + T
Sbjct: 32 FGETLKEPKSTRLFTFRHHRSIVQLYVAPAPEKSRKHLALYSLAIFVVITVHFGAQDILT 91
Query: 292 L 294
L
Sbjct: 92 L 92
>AK054669-1|BAB70789.1| 459|Homo sapiens protein ( Homo sapiens
cDNA FLJ30107 fis, clone BNGH41000198, weakly similar to
TETRACYCLINE RESISTANCE PROTEIN, CLASS E. ).
Length = 459
Score = 29.5 bits (63), Expect = 9.9
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +1
Query: 118 FGQ-LKKPDAT-VFVVHHVQANAAVLQSLAVEKSSCHRLIASLDRFVIIPVFLDFTTVKT 291
FG+ LK+P +T +F H ++ + + A EKS H + SL FV+I V + T
Sbjct: 230 FGETLKEPKSTRLFTFRHHRSIVQLYVAPAPEKSRKHLALYSLAIFVVITVHFGAQDILT 289
Query: 292 L 294
L
Sbjct: 290 L 290
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,421,931
Number of Sequences: 237096
Number of extensions: 2259014
Number of successful extensions: 7112
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 5936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6995
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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