Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10d09
(616 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g37830.1 68417.m05352 cytochrome c oxidase-related contains w... 33 0.11
At5g02400.1 68418.m00163 protein phosphatase 2C family protein /... 31 0.61
At3g44340.1 68416.m04764 sec23/sec24 transport family protein co... 31 0.61
At3g54590.1 68416.m06040 proline-rich extensin-like family prote... 29 3.2
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 29 3.2
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 28 4.3
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 28 4.3
At1g48280.1 68414.m05393 hydroxyproline-rich glycoprotein family... 28 4.3
At3g58590.1 68416.m06530 pentatricopeptide (PPR) repeat-containi... 28 5.7
At3g28550.1 68416.m03565 proline-rich extensin-like family prote... 28 5.7
At5g45350.1 68418.m05567 proline-rich family protein contains pr... 27 7.5
At4g32640.1 68417.m04646 sec23/sec24 transport protein-related 27 7.5
At4g16745.1 68417.m02529 exostosin family protein contains Pfam ... 27 7.5
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 27 7.5
At5g55750.1 68418.m06949 hydroxyproline-rich glycoprotein family... 27 9.9
At4g16120.1 68417.m02443 phytochelatin synthetase-related contai... 27 9.9
At3g12280.1 68416.m01533 retinoblastoma-related protein (RBR1) n... 27 9.9
At1g62030.1 68414.m06996 DC1 domain-containing protein contains ... 27 9.9
At1g30450.3 68414.m03722 cation-chloride cotransporter, putative... 27 9.9
At1g30450.2 68414.m03721 cation-chloride cotransporter, putative... 27 9.9
At1g30450.1 68414.m03720 cation-chloride cotransporter, putative... 27 9.9
At1g21270.1 68414.m02658 wall-associated kinase 2 (WAK2) identic... 27 9.9
>At4g37830.1 68417.m05352 cytochrome c oxidase-related contains weak
similarity to cytochrome c oxidase polypeptide
VIa-liver, mitochondrial precursor (EC 1.9.3.1)
(Swiss-Prot:P10818) [Rattus norvegicus]
Length = 102
Score = 33.5 bits (73), Expect = 0.11
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +3
Query: 300 KYRNFTYFVLLPLIAIQSFN-ALGHEPPPKGPCRDYEYMRVRTKRFPWG-DGVKSFYHN- 470
K+ TY + A+ + + GH P Y +M +R K FPWG DG+ HN
Sbjct: 43 KWEKITYLGIASCTALAVYVLSKGHHHGEDPPA--YPHMHIRNKEFPWGPDGLFEVKHNK 100
Query: 471 EH 476
EH
Sbjct: 101 EH 102
>At5g02400.1 68418.m00163 protein phosphatase 2C family protein /
PP2C family protein similar to protein phosphatase-2c
(GI:3608412) [Mesembryanthemum crystallinum]; contains
Pfam PF00481 : Protein phosphatase 2C domain
Length = 674
Score = 31.1 bits (67), Expect = 0.61
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = +3
Query: 60 PNYN*NMRFNVINKFKRPLIWTVEKARRYSLCGPPRPSKCGCPPKPGSGKVIVP 221
P+Y N + + K L+W EK R G + KC P SGK P
Sbjct: 290 PDYLLNNLYTAVQKELNGLLWNDEKLRSLGENGMTKTGKCSDEEDPESGKENCP 343
>At3g44340.1 68416.m04764 sec23/sec24 transport family protein
contains Pfam domains PF04811: Sec23/Sec24 trunk domain,
PF04815: Sec23/Sec24 helical domain and PF04810:
Sec23/Sec24 zinc finger
Length = 1096
Score = 31.1 bits (67), Expect = 0.61
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Frame = +3
Query: 156 GPP---RPSKCGCPPKPGSGKVIVPPADCKPGPICYNPCVPRFHHG 284
GPP RP G PP G G + PP+ GP+ P H G
Sbjct: 159 GPPSGARPIGFGSPPPMGPGMSMPPPSGMPGGPLSNGPPPSGMHGG 204
>At3g54590.1 68416.m06040 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 743
Score = 28.7 bits (61), Expect = 3.2
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 6/82 (7%)
Frame = +3
Query: 159 PPRPSKCGCPPKP----GSGKVIVPPADCKPGPICYNPCVPRFH--HGKDTWKKYRNFTY 320
PP P C CPP P S KV+ P P YN P ++ K +K +Y
Sbjct: 662 PPHPHVCVCPPPPPCYSPSPKVVY---KSPPPPYVYNSPPPPYYSPSPKVYYKSPPPPSY 718
Query: 321 FVLLPLIAIQSFNALGHEPPPK 386
+ P + +S + P PK
Sbjct: 719 YSPSPKVEYKSPPPPSYSPSPK 740
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 162 PRPSKCGCPPKPGSGKVIVPPADCKPGP 245
P PS C PP K + PPA C P P
Sbjct: 46 PSPSPCPSPPPKPQPKPVPPPA-CPPTP 72
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Frame = +3
Query: 147 SLCGPPRPSKCGCPPKPGSGKVIVPP---ADCKPGPICYNPCVPR 272
S GPPRP PP G K PP P P+ P PR
Sbjct: 381 SSAGPPRPPPPAPPPGSGGPKPPPPPGPKGPRPPPPMSLGPKAPR 425
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Frame = +3
Query: 147 SLCGPPRPSKCGCPPKPGSGKVIVPP---ADCKPGPICYNPCVPR 272
S GPPRP PP G K PP P P+ P PR
Sbjct: 381 SSAGPPRPPPPAPPPGSGGPKPPPPPGPKGPRPPPPMSLGPKAPR 425
>At1g48280.1 68414.m05393 hydroxyproline-rich glycoprotein family
protein
Length = 558
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 90 VINKFKRPLIWTVEKARRYSLCGPPRPSKCGCPPKPGSGKVIVPPA 227
+ +K ++P + E A S PP PS PP P K +V PA
Sbjct: 199 IASKLEQPKV-KKEVAVESSRLSPPSPSPSRLPPTPPLPKFLVSPA 243
>At3g58590.1 68416.m06530 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 741
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 201 CQALEDSRICLDVVDHKDCSVWLFQLS 121
C LEDSR+C D + K+ W LS
Sbjct: 364 CGNLEDSRLCFDYIRDKNIVCWNALLS 390
>At3g28550.1 68416.m03565 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 1018
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Frame = +3
Query: 159 PPRPSKCGCPPKP----GSGKVIVPPADCKPGPICYNPCVPRFH 278
PP P C CPP P S KV+ + P P Y+ P +H
Sbjct: 629 PPHPHVCVCPPPPPCYSPSPKVVYKSS---PPPYVYSSPPPPYH 669
>At5g45350.1 68418.m05567 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 177
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/41 (43%), Positives = 18/41 (43%)
Frame = +3
Query: 159 PPRPSKCGCPPKPGSGKVIVPPADCKPGPICYNPCVPRFHH 281
PP P G PP PG G PPA PG Y P HH
Sbjct: 62 PPAPGYGGYPPAPGYGG--YPPA---PGHGGYPPAGYPAHH 97
>At4g32640.1 68417.m04646 sec23/sec24 transport protein-related
Length = 1069
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = +3
Query: 156 GPP---RPSKCGCPPKPGSGKVIVPPADCKPGPI 248
GPP RP G PP GSG + +PP+ GP+
Sbjct: 161 GPPPGSRPMAFGSPPPVGSG-MSMPPSGMIGGPV 193
>At4g16745.1 68417.m02529 exostosin family protein contains Pfam
PF03016: Exostosin family
Length = 542
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 396 RDYEYMRVRTKRFPWGDGVKSFYHNEHVN 482
R YE M + K + + DG K +H H+N
Sbjct: 191 RSYELMELILKVYIYPDGDKPIFHEPHLN 219
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 159 PPRPSKCGCPPKPGSGKVIVPPADCKPGPICYNPCVPR 272
PP PS CPP P S PP P P P P+
Sbjct: 71 PPPPSPPPCPPPP-SPPPSPPPPQLPPPPQLPPPAPPK 107
>At5g55750.1 68418.m06949 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 175
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +3
Query: 141 RYSLCGPPR---PSKCGCPPKPGSGKVIVPPADCKPGPICYNPCVPRFH 278
+YS PP P + CPP P +G PP P Y+P P F+
Sbjct: 71 QYSPPPPPSQSSPPRSRCPPVPTTGCCNQPPG--PPPSTMYSPPYPYFY 117
>At4g16120.1 68417.m02443 phytochelatin synthetase-related contains
Pfam PF04833: Phytochelatin synthetase-like conserved
region; supporting cDNA gi|26449620|dbj|AK117261.1|
Length = 661
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +3
Query: 216 VPPADCKPGPICYNPCVPRFHHGKDTWKKYRNFTYF 323
+PP D P + + +HG+D K +R F F
Sbjct: 61 IPPNDTANQPYRFESVITVLNHGRDELKSWRVFVKF 96
>At3g12280.1 68416.m01533 retinoblastoma-related protein (RBR1)
nearly identical to retinoblastoma-related protein
[Arabidopsis thaliana] GI:8777927; contains Pfam
profiles: PF01858 retinoblastoma-associated protein A
domain, PF01857 retinoblastoma-associated protein B
domain
Length = 1013
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -1
Query: 241 PGLQSAGGTMTFPLPGFGGQPHXXXXXXXXXXXXLAFSTVQINGLLNLL 95
P LQSA + T P PG GG+ + V+ING++ L
Sbjct: 704 PPLQSAFASPTRPNPGGGGETCAETGINIFFTKINKLAAVRINGMVERL 752
>At1g62030.1 68414.m06996 DC1 domain-containing protein contains
Pfam protein PF03107 DC1 domain
Length = 743
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 605 KFYYNQPVLYAVYHLKCLL*KKWFVTLITVEWRSFTFAGQMVYV 474
+FY H++CLL + +V + W SF+F G+ +YV
Sbjct: 632 RFYTCGEYCCVTLHIECLLGQDLYVKPGS-SWISFSFNGEKIYV 674
>At1g30450.3 68414.m03722 cation-chloride cotransporter, putative
similar to cation-chloride co-transporter GB:AAC49874
GI:2582381 from [Nicotiana tabacum], Cation-Chloride
Cotransporter (CCC) Family Member, PMID:11500563
Length = 975
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 402 YEYMRVRTKRFPWGDGVKSFY 464
Y+Y+ ++ K WGDG KS Y
Sbjct: 584 YKYVGLKGKAGDWGDGFKSAY 604
>At1g30450.2 68414.m03721 cation-chloride cotransporter, putative
similar to cation-chloride co-transporter GB:AAC49874
GI:2582381 from [Nicotiana tabacum], Cation-Chloride
Cotransporter (CCC) Family Member, PMID:11500563
Length = 975
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 402 YEYMRVRTKRFPWGDGVKSFY 464
Y+Y+ ++ K WGDG KS Y
Sbjct: 584 YKYVGLKGKAGDWGDGFKSAY 604
>At1g30450.1 68414.m03720 cation-chloride cotransporter, putative
similar to cation-chloride co-transporter GB:AAC49874
GI:2582381 from [Nicotiana tabacum], Cation-Chloride
Cotransporter (CCC) Family Member, PMID:11500563
Length = 975
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 402 YEYMRVRTKRFPWGDGVKSFY 464
Y+Y+ ++ K WGDG KS Y
Sbjct: 584 YKYVGLKGKAGDWGDGFKSAY 604
>At1g21270.1 68414.m02658 wall-associated kinase 2 (WAK2) identical
to wall-associated kinase 2 [Arabidopsis thaliana]
GI:4826399; induced by salicylic acid or INA
(PMID:10380805)
Length = 732
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +3
Query: 339 IAIQSFNALGHEPPP-KGPCRDYEYMRVRTKRFPWGDGVKSFYHNEHV 479
IA + +G E P K + E +RV+T ++ W D + EH+
Sbjct: 652 IAAECTRLMGEERPRMKEVAAELEALRVKTTKYKWSDQYRETGEIEHL 699
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,659,785
Number of Sequences: 28952
Number of extensions: 314128
Number of successful extensions: 898
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1236350304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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