Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10d05
         (740 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D88378-1|BAA13603.1|  271|Homo sapiens proteasome inhibitor hPI3...    30   7.6  
BC126462-1|AAI26463.1|  271|Homo sapiens proteasome (prosome, ma...    30   7.6  

>D88378-1|BAA13603.1|  271|Homo sapiens proteasome inhibitor hPI31
           subunit protein.
          Length = 271

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 22/104 (21%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
 Frame = +1

Query: 325 CALMVGAGPNRFQIQEIIYPAR-NNNVKLEVELKDSEDHDKIAVAAVLQLSNADITNLLK 501
           C L VG  P     +  + PA  NNN  L V   + +D  +  +   + + ++ I N+L+
Sbjct: 36  CGLGVGDQPGPNDKKSELLPAGWNNNKDLYVLRYEYKDGSRKLLVKAITVESSMILNVLE 95

Query: 502 YIKTRLFENSMLKDDLLKGKSMGVGFALLRPFNDKQYRVMERIV 633
           Y   ++ + ++  DD +  + +G      +   + + R++  I+
Sbjct: 96  YGSQQVADLTLNLDDYIDAEHLGDFHRTYKNSEELRSRIVSGII 139


>BC126462-1|AAI26463.1|  271|Homo sapiens proteasome (prosome,
           macropain) inhibitor subunit 1 (PI31) protein.
          Length = 271

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 22/104 (21%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
 Frame = +1

Query: 325 CALMVGAGPNRFQIQEIIYPAR-NNNVKLEVELKDSEDHDKIAVAAVLQLSNADITNLLK 501
           C L VG  P     +  + PA  NNN  L V   + +D  +  +   + + ++ I N+L+
Sbjct: 36  CGLGVGDQPGPNDKKSELLPAGWNNNKDLYVLRYEYKDGSRKLLVKAITVESSMILNVLE 95

Query: 502 YIKTRLFENSMLKDDLLKGKSMGVGFALLRPFNDKQYRVMERIV 633
           Y   ++ + ++  DD +  + +G      +   + + R++  I+
Sbjct: 96  YGSQQVADLTLNLDDYIDAEHLGDFHRTYKNSEELRSRIVSGII 139


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,221,871
Number of Sequences: 237096
Number of extensions: 2005156
Number of successful extensions: 3620
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3618
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)