Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10d04
(658 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC031074-1|AAH31074.1| 322|Homo sapiens poly (ADP-ribose) polym... 50 6e-06
BC006389-1|AAH06389.1| 323|Homo sapiens poly (ADP-ribose) polym... 50 6e-06
AK000516-1|BAA91222.1| 207|Homo sapiens protein ( Homo sapiens ... 45 2e-04
U30872-1|AAA82935.1| 3113|Homo sapiens mitosin protein. 31 4.8
U25725-1|AAA86889.1| 1017|Homo sapiens AH antigen protein. 31 4.8
U19769-1|AAA82889.1| 3210|Homo sapiens CENP-F kinetochore protei... 31 4.8
AL445666-1|CAH71810.1| 3114|Homo sapiens centromere protein F, 3... 31 4.8
AL445305-6|CAH73032.1| 3114|Homo sapiens centromere protein F, 3... 31 4.8
L07590-1|AAB02613.1| 1150|Homo sapiens protein phosphatase 2A 13... 30 6.3
BC065531-1|AAH65531.1| 1150|Homo sapiens protein phosphatase 2 (... 30 6.3
>BC031074-1|AAH31074.1| 322|Homo sapiens poly (ADP-ribose)
polymerase family, member 16 protein.
Length = 322
Score = 50.4 bits (115), Expect = 6e-06
Identities = 24/59 (40%), Positives = 38/59 (64%)
Frame = +3
Query: 333 KDFKAADLKWSLFVAAAFSFRYESCLRPFPPAFMKSGIKDMDELLSVITDVPALDLVLQ 509
+D AADL+ SLF +A S++ +S LRPFP ++ + KD + LL+ + +P L +LQ
Sbjct: 15 RDMLAADLRCSLFASALQSYKRDSVLRPFPASYARGDCKDFEALLADASKLPNLKELLQ 73
>BC006389-1|AAH06389.1| 323|Homo sapiens poly (ADP-ribose)
polymerase family, member 16 protein.
Length = 323
Score = 50.4 bits (115), Expect = 6e-06
Identities = 24/59 (40%), Positives = 38/59 (64%)
Frame = +3
Query: 333 KDFKAADLKWSLFVAAAFSFRYESCLRPFPPAFMKSGIKDMDELLSVITDVPALDLVLQ 509
+D AADL+ SLF +A S++ +S LRPFP ++ + KD + LL+ + +P L +LQ
Sbjct: 15 RDMLAADLRCSLFASALQSYKRDSVLRPFPASYARGDCKDFEALLADASKLPNLKELLQ 73
>AK000516-1|BAA91222.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ20509 fis, clone KAT09623. ).
Length = 207
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/47 (42%), Positives = 31/47 (65%)
Frame = +3
Query: 333 KDFKAADLKWSLFVAAAFSFRYESCLRPFPPAFMKSGIKDMDELLSV 473
+D AADL+ SLF +A S++ +S LRPFP ++ + KD + L S+
Sbjct: 15 RDMLAADLRCSLFASALQSYKRDSVLRPFPASYARGDCKDFEALTSL 61
>U30872-1|AAA82935.1| 3113|Homo sapiens mitosin protein.
Length = 3113
Score = 30.7 bits (66), Expect = 4.8
Identities = 14/55 (25%), Positives = 31/55 (56%)
Frame = +3
Query: 135 INPYKFKTTN*RQCLFIHKMEREHEVLSETGTNCNIASVSETMSDINQTKLDTLE 299
I Y+ K T+ +CL K+E + S+ N ++ + ++ + ++ +TK+D L+
Sbjct: 2724 IQTYREKLTSKEECLSSQKLEIDLLKSSKEELNNSLKATTQILEELKKTKMDNLK 2778
>U25725-1|AAA86889.1| 1017|Homo sapiens AH antigen protein.
Length = 1017
Score = 30.7 bits (66), Expect = 4.8
Identities = 14/55 (25%), Positives = 31/55 (56%)
Frame = +3
Query: 135 INPYKFKTTN*RQCLFIHKMEREHEVLSETGTNCNIASVSETMSDINQTKLDTLE 299
I Y+ K T+ +CL K+E + S+ N ++ + ++ + ++ +TK+D L+
Sbjct: 628 IQTYREKLTSKEECLSSQKLEIDLLKSSKEELNNSLKATTQILEELKKTKMDNLK 682
>U19769-1|AAA82889.1| 3210|Homo sapiens CENP-F kinetochore protein
protein.
Length = 3210
Score = 30.7 bits (66), Expect = 4.8
Identities = 14/55 (25%), Positives = 31/55 (56%)
Frame = +3
Query: 135 INPYKFKTTN*RQCLFIHKMEREHEVLSETGTNCNIASVSETMSDINQTKLDTLE 299
I Y+ K T+ +CL K+E + S+ N ++ + ++ + ++ +TK+D L+
Sbjct: 2821 IQTYREKLTSKEECLSSQKLEIDLLKSSKEELNNSLKATTQILEELKKTKMDNLK 2875
>AL445666-1|CAH71810.1| 3114|Homo sapiens centromere protein F,
350/400ka (mitosin) protein.
Length = 3114
Score = 30.7 bits (66), Expect = 4.8
Identities = 14/55 (25%), Positives = 31/55 (56%)
Frame = +3
Query: 135 INPYKFKTTN*RQCLFIHKMEREHEVLSETGTNCNIASVSETMSDINQTKLDTLE 299
I Y+ K T+ +CL K+E + S+ N ++ + ++ + ++ +TK+D L+
Sbjct: 2725 IQTYREKLTSKEECLSSQKLEIDLLKSSKEELNNSLKATTQILEELKKTKMDNLK 2779
>AL445305-6|CAH73032.1| 3114|Homo sapiens centromere protein F,
350/400ka (mitosin) protein.
Length = 3114
Score = 30.7 bits (66), Expect = 4.8
Identities = 14/55 (25%), Positives = 31/55 (56%)
Frame = +3
Query: 135 INPYKFKTTN*RQCLFIHKMEREHEVLSETGTNCNIASVSETMSDINQTKLDTLE 299
I Y+ K T+ +CL K+E + S+ N ++ + ++ + ++ +TK+D L+
Sbjct: 2725 IQTYREKLTSKEECLSSQKLEIDLLKSSKEELNNSLKATTQILEELKKTKMDNLK 2779
>L07590-1|AAB02613.1| 1150|Homo sapiens protein phosphatase 2A 130
kDa regulatory subunit protein.
Length = 1150
Score = 30.3 bits (65), Expect = 6.3
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 393 RYESCLRPFPPAFMKSGIKDMDELLSVITDVPALDLV-LQQLDNLEALPNISDIIDL 560
R S L+ P FM+SG + +L +I+++P+L L + E P D++ L
Sbjct: 284 RLASYLKKLPFEFMQSGNNEALDLTELISNMPSLQLTPFSPVFGTEQPPKYEDVVQL 340
>BC065531-1|AAH65531.1| 1150|Homo sapiens protein phosphatase 2
(formerly 2A), regulatory subunit B'', alpha protein.
Length = 1150
Score = 30.3 bits (65), Expect = 6.3
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 393 RYESCLRPFPPAFMKSGIKDMDELLSVITDVPALDLV-LQQLDNLEALPNISDIIDL 560
R S L+ P FM+SG + +L +I+++P+L L + E P D++ L
Sbjct: 284 RLASYLKKLPFEFMQSGNNEALDLTELISNMPSLQLTPFSPVFGTEQPPKYEDVVQL 340
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,727,248
Number of Sequences: 237096
Number of extensions: 1662160
Number of successful extensions: 6370
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6370
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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