Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10d02
(713 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 344 5e-95
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 343 7e-95
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 337 4e-93
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 232 2e-61
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 190 1e-48
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 175 2e-44
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 150 1e-36
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 149 2e-36
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 149 3e-36
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 147 7e-36
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 146 2e-35
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 146 2e-35
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 145 3e-35
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 6e-27
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 117 1e-26
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 1e-25
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 112 2e-25
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 1e-18
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 88 6e-18
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 83 2e-16
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 75 8e-14
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 71 7e-13
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 9e-12
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 3e-07
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 49 4e-06
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 47 1e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 34 0.13
SB_23752| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083) 30 2.1
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 2.8
SB_7607| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_26663| Best HMM Match : Telo_bind (HMM E-Value=1.8e-17) 29 3.7
SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4) 29 4.9
SB_28090| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_34911| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 344 bits (845), Expect = 5e-95
Identities = 162/189 (85%), Positives = 164/189 (86%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 325
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLERINVYYNEA+GGKYV
Sbjct: 214 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 273
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 505
PRAV+VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 274 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 333
Query: 506 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 685
RKEAE CDCLQGFQ KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 334 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 393
Query: 686 XPYNATLSV 712
PYNATLSV
Sbjct: 394 EPYNATLSV 402
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 343 bits (844), Expect = 7e-95
Identities = 161/189 (85%), Positives = 164/189 (86%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 325
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 505
PRA++VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 506 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 685
RKEAE CDCLQGFQ KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 686 XPYNATLSV 712
PYNATLSV
Sbjct: 181 EPYNATLSV 189
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 337 bits (829), Expect = 4e-93
Identities = 156/189 (82%), Positives = 164/189 (86%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 325
MREIV +QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 505
PR+V++DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVV 120
Query: 506 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 685
RKEAE CDC+QGFQ KIREEYPDRIMNTFS+VPSPKVSDTVV
Sbjct: 121 RKEAESCDCIQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSIVPSPKVSDTVV 180
Query: 686 XPYNATLSV 712
PYNATLSV
Sbjct: 181 EPYNATLSV 189
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 232 bits (568), Expect = 2e-61
Identities = 110/133 (82%), Positives = 112/133 (84%)
Frame = +2
Query: 314 GKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 493
GKYVPRAV+VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 494 LDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVS 673
LDVVRKEAE CDC+QGFQ KIREEYPDRIMNTFSVVPSPKVS
Sbjct: 62 LDVVRKEAESCDCIQGFQLTHSLGGGTGSGMVTLLILKIREEYPDRIMNTFSVVPSPKVS 121
Query: 674 DTVVXPYNATLSV 712
DTVV PYNATLSV
Sbjct: 122 DTVVEPYNATLSV 134
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 190 bits (463), Expect = 1e-48
Identities = 85/92 (92%), Positives = 88/92 (95%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 325
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVF 421
PRA++VDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 175 bits (427), Expect = 2e-44
Identities = 77/121 (63%), Positives = 92/121 (76%)
Frame = +2
Query: 308 SGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 487
+GG+YVPR+++VDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 488 SVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPK 667
++ DV+RKEAE CDC+QG Q KIREEYPDRI++ FSVVPSPK
Sbjct: 71 NIFDVLRKEAENCDCMQGVQLIQALGGGTGSGLGTLILSKIREEYPDRILSAFSVVPSPK 130
Query: 668 V 670
V
Sbjct: 131 V 131
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 150 bits (364), Expect = 1e-36
Identities = 76/190 (40%), Positives = 105/190 (55%), Gaps = 2/190 (1%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGK 319
MRE + I GQ G QIG WE+ EHGI G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 320 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 499
+VPRAV VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 500 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDT 679
+RK A+ C LQGF ++ +Y + F++ P+P+VS
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 680 VVXPYNATLS 709
VV PYN+ L+
Sbjct: 181 VVEPYNSILT 190
Score = 148 bits (358), Expect = 5e-36
Identities = 74/189 (39%), Positives = 104/189 (55%), Gaps = 2/189 (1%)
Frame = +2
Query: 149 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGKY 322
RE + I GQ G QIG WE+ EHGI G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 323 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 502
VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 495 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDR 554
Query: 503 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTV 682
+RK A+ C LQGF ++ +Y + F++ P+P+VS V
Sbjct: 555 IRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 614
Query: 683 VXPYNATLS 709
V PYN+ L+
Sbjct: 615 VEPYNSILT 623
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 149 bits (362), Expect = 2e-36
Identities = 71/190 (37%), Positives = 106/190 (55%), Gaps = 2/190 (1%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGK 319
MRE + + GQ G Q+G WE+ EHGI G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 320 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 499
+VPRAV DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 500 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDT 679
+RK A+GC LQGF ++ +Y + F++ P+P++S
Sbjct: 121 RLRKLADGCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTA 180
Query: 680 VVXPYNATLS 709
VV PYN+ L+
Sbjct: 181 VVEPYNSVLT 190
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 149 bits (360), Expect = 3e-36
Identities = 74/190 (38%), Positives = 105/190 (55%), Gaps = 2/190 (1%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGK 319
+RE + I GQ G QIG WE+ EHGI G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 320 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 499
+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 500 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDT 679
+RK A+ C LQGF ++ +Y + F++ P+P+VS
Sbjct: 706 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTA 765
Query: 680 VVXPYNATLS 709
VV PYN+ L+
Sbjct: 766 VVEPYNSILT 775
Score = 147 bits (357), Expect = 7e-36
Identities = 72/191 (37%), Positives = 105/191 (54%), Gaps = 2/191 (1%)
Frame = +2
Query: 143 IMREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGG 316
+ RE + + GQ G QIG WE+ EHGI G D + + N +++E G
Sbjct: 64 LQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 123
Query: 317 KYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 496
K+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 124 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 183
Query: 497 DVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSD 676
D +RK A+ C LQGF ++ +Y + F++ P+P++S
Sbjct: 184 DRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQIST 243
Query: 677 TVVXPYNATLS 709
VV PYN+ L+
Sbjct: 244 AVVEPYNSILT 254
Score = 62.5 bits (145), Expect = 3e-10
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 149 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGKY 322
RE + I GQ G QIG WE+ EHGI G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 323 VPRAVMVDLEPGTMDSV 373
VPRAV VDLEP + +
Sbjct: 574 VPRAVFVDLEPTVRECI 590
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 147 bits (357), Expect = 7e-36
Identities = 73/189 (38%), Positives = 104/189 (55%), Gaps = 2/189 (1%)
Frame = +2
Query: 149 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGKY 322
RE + I GQ G QIG WE+ EHGI G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 323 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 502
VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 503 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTV 682
+RK A+ C LQGF ++ +Y + F++ P+P+VS V
Sbjct: 121 IRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 180
Query: 683 VXPYNATLS 709
V PYN+ L+
Sbjct: 181 VEPYNSILT 189
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 146 bits (354), Expect = 2e-35
Identities = 73/189 (38%), Positives = 102/189 (53%), Gaps = 2/189 (1%)
Frame = +2
Query: 149 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGKY 322
RE + I GQ G QIG WE+ EHGI G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 323 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 502
VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 503 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTV 682
+RK A+GC LQGF ++ +Y + F++ P+P +S V
Sbjct: 493 LRKLADGCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPHISSAV 552
Query: 683 VXPYNATLS 709
V PYN+ L+
Sbjct: 553 VEPYNSILT 561
Score = 144 bits (348), Expect = 8e-35
Identities = 69/189 (36%), Positives = 103/189 (54%), Gaps = 2/189 (1%)
Frame = +2
Query: 149 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGKY 322
RE + + GQ G Q+G WE+ EHGI G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 323 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 502
VPRAV DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 866 VPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDR 925
Query: 503 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTV 682
+RK A+ C LQGF ++ +Y + F++ P+P++S V
Sbjct: 926 IRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQISTAV 985
Query: 683 VXPYNATLS 709
V PYN+ L+
Sbjct: 986 VEPYNSILT 994
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 146 bits (353), Expect = 2e-35
Identities = 72/190 (37%), Positives = 104/190 (54%), Gaps = 2/190 (1%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGK 319
MRE + I GQ G Q+G WE+ EHGI G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 320 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 499
+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 500 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDT 679
RK A+ C LQGF ++ +Y + F++ P+P++S
Sbjct: 121 RCRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQISTA 180
Query: 680 VVXPYNATLS 709
VV PYN+ L+
Sbjct: 181 VVEPYNSILT 190
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 145 bits (352), Expect = 3e-35
Identities = 70/189 (37%), Positives = 104/189 (55%), Gaps = 2/189 (1%)
Frame = +2
Query: 149 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGKY 322
RE V I GQ G Q+G WE+ EHGI G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 323 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 502
VPRAV VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+VLD
Sbjct: 480 VPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDR 539
Query: 503 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTV 682
+RK A+ C LQGF ++ +Y + F++ P+P++S V
Sbjct: 540 IRKLADQCSGLQGFLVFHSFGGGTGSGFSALLLERLSVDYGKKSKLEFAIYPAPQISTAV 599
Query: 683 VXPYNATLS 709
V PYN+ L+
Sbjct: 600 VEPYNSVLT 608
Score = 127 bits (307), Expect = 8e-30
Identities = 62/175 (35%), Positives = 95/175 (54%), Gaps = 2/175 (1%)
Frame = +2
Query: 191 IGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGKYVPRAVMVDLEPGTM 364
+G WE+ EHGI G D + + N +++E GK+VPRAV DLEP +
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 365 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGF 544
D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +RK A+ C LQGF
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQGF 120
Query: 545 QXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVXPYNATLS 709
++ +Y + F++ P+P++S VV PYN+ L+
Sbjct: 121 LIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILT 175
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 118 bits (283), Expect = 6e-27
Identities = 55/144 (38%), Positives = 81/144 (56%)
Frame = +2
Query: 278 ERINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 457
+ N ++ E GK+VPRAV VDLEP +D +R+G + Q+F P+ + G+ A NN+A+G
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARG 71
Query: 458 HYTEGAELVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 637
HYT G E +D LD +RK A+ C LQGF ++ +Y +
Sbjct: 72 HYTVGKEHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSK 131
Query: 638 NTFSVVPSPKVSDTVVXPYNATLS 709
F+V P+P++S VV PYN+ LS
Sbjct: 132 LEFAVYPAPQISTAVVEPYNSILS 155
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 117 bits (281), Expect = 1e-26
Identities = 67/190 (35%), Positives = 93/190 (48%), Gaps = 2/190 (1%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGK 319
MRE + I GQ G QIG WE+ EHGI G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 320 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 499
+VPRAV VDLEP + P+ + G+ A NN+A+GHYT G + VD VLD
Sbjct: 61 HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 500 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDT 679
+RK A+ C LQGF ++ +Y + F+V P+P ++
Sbjct: 111 RLRKLADQCSGLQGFFIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPHIASA 170
Query: 680 VVXPYNATLS 709
VV PYN+ L+
Sbjct: 171 VVEPYNSILT 180
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 113 bits (273), Expect = 1e-25
Identities = 53/137 (38%), Positives = 79/137 (57%)
Frame = +2
Query: 299 NEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 478
+EA+ GKYVPRAV+VDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 479 LVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVP 658
+V+ V+D +RK + C LQGF + +Y + F+V P
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQGFLIFHSFGGGTGSGFASLITEHLSVDYGKKSKLEFAVYP 1084
Query: 659 SPKVSDTVVXPYNATLS 709
+P +S VV PYN+ L+
Sbjct: 1085 APHISTAVVEPYNSVLT 1101
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 112 bits (270), Expect = 2e-25
Identities = 53/95 (55%), Positives = 64/95 (67%)
Frame = +2
Query: 425 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXX 604
Q+ A NNWAKG YTEGAEL+DS +D +RK AE CD +QGFQ
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLS 61
Query: 605 KIREEYPDRIMNTFSVVPSPKVSDTVVXPYNATLS 709
KIREEYPDR++++F V+PSP VS+TV PYNATLS
Sbjct: 62 KIREEYPDRLVSSFCVLPSPLVSETVTEPYNATLS 96
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 90.6 bits (215), Expect = 1e-18
Identities = 42/115 (36%), Positives = 64/115 (55%)
Frame = +2
Query: 365 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGF 544
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 545 QXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVXPYNATLS 709
++ +Y + F++ P+P++S VV PYN+ L+
Sbjct: 73 LIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILT 127
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 88.2 bits (209), Expect = 6e-18
Identities = 41/113 (36%), Positives = 63/113 (55%)
Frame = +2
Query: 371 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQX 550
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 62
Query: 551 XXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVXPYNATLS 709
++ +Y + F++ P+P++S VV PYN+ L+
Sbjct: 63 FHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILT 115
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 83.0 bits (196), Expect = 2e-16
Identities = 39/113 (34%), Positives = 61/113 (53%)
Frame = +2
Query: 371 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQX 550
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK A+ C LQGF
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 551 XXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVXPYNATLS 709
++ +Y + F+V P+P++S VV PYN+ L+
Sbjct: 63 FHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILT 115
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 74.5 bits (175), Expect = 8e-14
Identities = 62/199 (31%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Frame = +2
Query: 155 IVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE-RINVYYNEASGGKYVPR 331
IV +Q GQCGNQIG + +++I + DAT S +L R Y E S ++ R
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVE----DATKLNSRFLCKELTTRSCTEYEEESLARFFTR 58
Query: 332 ---------AVMVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGA 475
AV +D+E + S G P F Q G+GNNWA G G
Sbjct: 59 ENDDILNARAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGP 118
Query: 476 ELVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVV 655
+ +D VLD+V++E E CD L GF +R+ YP+ + +VV
Sbjct: 119 KSIDKVLDLVQREVEKCDRLDGFLTLLSLAGGTGSGVGAFVTNSLRDFYPNSFI-VNNVV 177
Query: 656 PSPKVSDTVVXPYNATLSV 712
+ + +V YNATL++
Sbjct: 178 WPYSMGEVIVQNYNATLTL 196
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 71.3 bits (167), Expect = 7e-13
Identities = 34/70 (48%), Positives = 43/70 (61%)
Frame = +2
Query: 503 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTV 682
+RKEAE CD +QGFQ ++EEYPDRI+++ SV PSP+VS+ V
Sbjct: 1 MRKEAEDCDAIQGFQLLHSLGGGTGSGLGTLILYHLQEEYPDRILSSVSVFPSPRVSEIV 60
Query: 683 VXPYNATLSV 712
V PYNA LSV
Sbjct: 61 VEPYNAALSV 70
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 67.7 bits (158), Expect = 9e-12
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGK 319
MRE + + GQ G QIG WE+ EHGI G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 320 YVPRAVMVDLEPGTMDSVR 376
+VPRAV VDLEP + ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +2
Query: 371 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 511
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 3e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 371 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 511
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 48.8 bits (111), Expect = 4e-06
Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 8/136 (5%)
Frame = +2
Query: 329 RAVMVDLEPGTMDSVR--SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVD 487
R V VD E + S R G GQ R N + G+ G GNN+A G++ G L+
Sbjct: 40 RCVCVDSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLH 98
Query: 488 SVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPK 667
+D +RKE E CD G + + YP + + SV SP
Sbjct: 99 MTMDAMRKEVERCDSFAGTIVMHSLTGGTGSGLGARLVETLSDAYP--LAHVMSVAVSPH 156
Query: 668 VS-DTVVXPYNATLSV 712
VS ++ + YN+ LS+
Sbjct: 157 VSGESPLQHYNSLLSL 172
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 1/129 (0%)
Frame = +2
Query: 329 RAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 508
RAV++D+E G ++++ GP +F + SG GNNW + + + VV+
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNWYT-LLCKCFAIRKDIFVVVQ 134
Query: 509 KEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXK-IREEYPDRIMNTFSVVPSPKVSDTVV 685
E C + + + ++YPD T +V PS D +
Sbjct: 135 SFKEWTLCFEAKEMYLEDQNKGTGSGVGTYVLNLLHDDYPDVYRFTTAVYPSAD-DDVIT 193
Query: 686 XPYNATLSV 712
PYN+ L++
Sbjct: 194 SPYNSVLAM 202
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 203 FWEVISDEHGIDATGAYSG-DSDLQLERINVYYNE 304
FWEVI++EHGID G + S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD--SDLQLERINVYYNEASGGK 319
MRE + I GQ G QIG WE+ EHGI G D +D + + +++E + GK
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETASGK 255
Query: 320 Y 322
+
Sbjct: 256 H 256
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +2
Query: 509 KEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVX 688
K A+ C LQGF ++ +Y R F+V P+P++S VV
Sbjct: 255 KHADQCTGLQGFLVFHSFGGGTGSGFSSLLMERLSVDYGKRSKLEFAVYPAPQISTAVVE 314
Query: 689 PYNATLS 709
PYN+ L+
Sbjct: 315 PYNSILT 321
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +2
Query: 515 AEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVXPY 694
A+ C LQGF ++ +Y + F++ P+P++S VV PY
Sbjct: 1 ADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPY 60
Query: 695 NATLS 709
N+ L+
Sbjct: 61 NSILT 65
>SB_23752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 32.3 bits (70), Expect = 0.40
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 602 KSKESPYQIQYLLPENELAENPADNRSLLLLF*LHPVPNQPVQPPLCNVLSPSYSPP 432
K ++ Q+ LP P+ + +LL L L PVP+ P Q P +P+++PP
Sbjct: 444 KQQQKHKQVVLPLPPASATPPPSSDGALLDLG-LDPVPSAPTQAPTPTPAAPTHAPP 499
>SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083)
Length = 1266
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/53 (41%), Positives = 24/53 (45%)
Frame = -1
Query: 491 PNQPVQPPLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQ 333
P+Q VQ PL L P Y PP V TA R P Q QGPP+Q
Sbjct: 1080 PHQAVQQPLPQQLPPQYRPPAIV------------TAAVARPP--QVQGPPTQ 1118
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = -3
Query: 435 APDCPKTKLSGRKICPNGPERTESMVPGSRSTITAR----GTYLP 313
A DCP ++ +GR +CP P +S + ++++I GT+ P
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKASIEVNDFTLGTHTP 182
>SB_7607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2499
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 270 CSLNASMSTITKLQGASTSREL*WWTLSLE 359
CSLN S S+ L+G S R + +W SLE
Sbjct: 907 CSLNDSPSSSIMLEGYSLGRAVDYWVYSLE 936
>SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1059
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 605 KIREEYPDRIMNTFSVVPSPKVS 673
K++E+YPD I+++F + P K S
Sbjct: 486 KLQEQYPDHILSSFELFPCEKAS 508
>SB_26663| Best HMM Match : Telo_bind (HMM E-Value=1.8e-17)
Length = 1086
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = +3
Query: 159 STSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLNASMSTITKLQGASTS 326
ST+ R + QSSG + A P T +T TC A+ +T QGASTS
Sbjct: 703 STTSRPQPAQQPAQSSGATPLEAQAEAP---TVSTTTCGAAATKTTSAISQGASTS 755
>SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4)
Length = 582
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +2
Query: 140 AIMREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYS--GDSDLQLERINVYYNEASG 313
A +RE++ +Q G N +G +W + DA S L E + V E
Sbjct: 25 ATVREVITLQFGHYANFVGTHWWNIQESSFCYDAASPKSEINHDCLFREGLTVTGQET-- 82
Query: 314 GKYVPRAVMVDLE 352
Y PR ++ DL+
Sbjct: 83 --YTPRLLLYDLK 93
>SB_28090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 28.3 bits (60), Expect = 6.5
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Frame = +2
Query: 227 HGIDATGAYSGDSDLQLERINVYYNEASGGKYVPR-AVMVDLEPGTMDSVRSGPFGQIFR 403
+G+++TG+Y+ LER +V +AS G Y R A M+ + DS S G I R
Sbjct: 104 YGMNSTGSYASQYSKSLER-DVNRGKASVGDYYARKAEMLKILMTDNDSGESCTRGIIPR 162
Query: 404 -PDNFVFGQSGAGNNWAKGHYTEGAELV 484
+ G SG W A V
Sbjct: 163 LHQRYKLGVSGTKVAWTSADIAHYASTV 190
>SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -3
Query: 426 CPKTKLSGRKICPNGPERTESMVPGSRSTITARGTYLPPEA 304
CP+ + RK P+G + + G+ S + ++G +PP A
Sbjct: 456 CPQGNMDYRKAAPDGRDMQQMGQKGNFSQMLSQGRGMPPGA 496
>SB_34911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 904
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 479 VQPPLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRS-PWFQAQGPPSQL 330
V PP+C+ L S P S A+ A++G + W + + P +QL
Sbjct: 193 VHPPICDCLGCRISSPVVASPESIREAFEAENAKDGNADDWGEVKTPTNQL 243
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,356,634
Number of Sequences: 59808
Number of extensions: 507387
Number of successful extensions: 1464
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1421
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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