Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10d02
(713 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 326 7e-90
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 324 5e-89
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 323 6e-89
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 321 2e-88
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 320 4e-88
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 320 6e-88
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 320 6e-88
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 320 8e-88
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 320 8e-88
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 155 4e-38
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 155 4e-38
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 152 2e-37
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 152 2e-37
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 151 4e-37
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 150 1e-36
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 150 1e-36
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 133 1e-31
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 133 1e-31
At4g37190.1 68417.m05265 expressed protein 32 0.43
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 30 1.3
At2g26850.1 68415.m03221 F-box family protein contains Pfam PF00... 29 2.3
At3g24550.1 68416.m03083 protein kinase family protein contains ... 29 3.1
At3g09000.1 68416.m01053 proline-rich family protein 29 4.0
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 28 7.1
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 28 7.1
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 28 7.1
At5g57070.1 68418.m07124 hydroxyproline-rich glycoprotein family... 27 9.3
At1g69500.1 68414.m07986 cytochrome P450 family protein similar ... 27 9.3
At1g54970.1 68414.m06278 proline-rich family protein similar to ... 27 9.3
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 27 9.3
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 326 bits (802), Expect = 7e-90
Identities = 152/190 (80%), Positives = 163/190 (85%), Gaps = 1/190 (0%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS-DLQLERINVYYNEASGGKY 322
MREI+HIQ GQCGNQIG+KFWEVI DEHGID+TG YSGD+ DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 323 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 502
VPRAV++DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 503 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTV 682
VRKEAE CDCLQGFQ KIREEYPDR+M TFSV PSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 683 VXPYNATLSV 712
V PYNATLSV
Sbjct: 181 VEPYNATLSV 190
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 324 bits (795), Expect = 5e-89
Identities = 149/190 (78%), Positives = 162/190 (85%), Gaps = 1/190 (0%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS-DLQLERINVYYNEASGGKY 322
MREI+H+Q GQCGNQIG+KFWEVI DEHG+D TG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 323 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 502
VPRAV++DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 503 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTV 682
VRKEAE CDCLQGFQ KIREEYPDR+M TFSV PSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 683 VXPYNATLSV 712
V PYNATLSV
Sbjct: 181 VEPYNATLSV 190
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 323 bits (794), Expect = 6e-89
Identities = 151/189 (79%), Positives = 159/189 (84%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 325
MREI+HIQ GQCGNQIGAKFWEVI EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 505
PRAV++DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 506 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 685
RKEAE CDCLQGFQ KIREEYPDR+M TFSV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 686 XPYNATLSV 712
PYNATLSV
Sbjct: 181 EPYNATLSV 189
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 321 bits (789), Expect = 2e-88
Identities = 151/189 (79%), Positives = 159/189 (84%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 325
MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 505
PRAV++DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 506 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 685
RKEAE DCLQGFQ KIREEYPDR+M TFSV PSPKVSDTVV
Sbjct: 121 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 686 XPYNATLSV 712
PYNATLSV
Sbjct: 181 EPYNATLSV 189
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 320 bits (787), Expect = 4e-88
Identities = 148/189 (78%), Positives = 160/189 (84%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 325
MREI+HIQ GQCGNQIG+KFWEV++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 505
PRAV++DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 506 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 685
RKEAE CDCLQGFQ KIREEYPDR+M TFSV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 686 XPYNATLSV 712
PYNATLSV
Sbjct: 181 EPYNATLSV 189
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 320 bits (786), Expect = 6e-88
Identities = 147/189 (77%), Positives = 160/189 (84%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 325
MREI+HIQ GQCGNQIGAKFWEV+ EHGID+TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 505
PRAV++DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 506 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 685
RKEAE CDCLQGFQ KIREEYPDR+M TFSV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 686 XPYNATLSV 712
PYNATLSV
Sbjct: 181 EPYNATLSV 189
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 320 bits (786), Expect = 6e-88
Identities = 146/189 (77%), Positives = 160/189 (84%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 325
MREI+HIQ GQCGNQIG+KFWEV+ DEHGID TG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 505
PRA+++DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 506 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 685
RKEAE CDCLQGFQ KIREEYPDR+M TFSV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 686 XPYNATLSV 712
PYNATLSV
Sbjct: 181 EPYNATLSV 189
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 320 bits (785), Expect = 8e-88
Identities = 148/189 (78%), Positives = 159/189 (84%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 325
MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 505
PRAV++DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 506 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 685
RKEAE CDCLQGFQ KIREEYPDR+M TFSV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 686 XPYNATLSV 712
PYNATLSV
Sbjct: 181 EPYNATLSV 189
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 320 bits (785), Expect = 8e-88
Identities = 148/189 (78%), Positives = 159/189 (84%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 325
MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 505
PRAV++DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 506 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 685
RKEAE CDCLQGFQ KIREEYPDR+M TFSV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 686 XPYNATLSV 712
PYNATLSV
Sbjct: 181 EPYNATLSV 189
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 155 bits (375), Expect = 4e-38
Identities = 77/190 (40%), Positives = 107/190 (56%), Gaps = 2/190 (1%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGK 319
MREI+ I GQ G Q+G WE+ EHGI G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 320 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 499
+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 500 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDT 679
VRK A+ C LQGF ++ +Y + F++ PSP+VS
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 680 VVXPYNATLS 709
VV PYN+ LS
Sbjct: 181 VVEPYNSVLS 190
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 155 bits (375), Expect = 4e-38
Identities = 77/190 (40%), Positives = 107/190 (56%), Gaps = 2/190 (1%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGK 319
MREI+ I GQ G Q+G WE+ EHGI G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 320 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 499
+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 500 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDT 679
VRK A+ C LQGF ++ +Y + F++ PSP+VS
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 680 VVXPYNATLS 709
VV PYN+ LS
Sbjct: 181 VVEPYNSVLS 190
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 152 bits (369), Expect = 2e-37
Identities = 77/190 (40%), Positives = 106/190 (55%), Gaps = 2/190 (1%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGK 319
MRE + I GQ G Q+G WE+ EHGI G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 320 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 499
+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 500 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDT 679
+RK A+ C LQGF ++ +Y + F+V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 680 VVXPYNATLS 709
VV PYN+ LS
Sbjct: 181 VVEPYNSVLS 190
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 152 bits (369), Expect = 2e-37
Identities = 77/190 (40%), Positives = 106/190 (55%), Gaps = 2/190 (1%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGK 319
MRE + I GQ G Q+G WE+ EHGI G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 320 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 499
+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 500 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDT 679
+RK A+ C LQGF ++ +Y + F+V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 680 VVXPYNATLS 709
VV PYN+ LS
Sbjct: 181 VVEPYNSVLS 190
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 151 bits (366), Expect = 4e-37
Identities = 74/190 (38%), Positives = 108/190 (56%), Gaps = 2/190 (1%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGK 319
MREI+ I GQ G Q+G WE+ EHGI G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 320 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 499
+VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 500 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDT 679
+RK A+ C LQGF ++ ++ + F++ PSP+VS
Sbjct: 121 RLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTA 180
Query: 680 VVXPYNATLS 709
VV PYN+ LS
Sbjct: 181 VVEPYNSVLS 190
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 150 bits (363), Expect = 1e-36
Identities = 76/190 (40%), Positives = 105/190 (55%), Gaps = 2/190 (1%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGK 319
MRE + I GQ G Q+G WE+ EHGI G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 320 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 499
+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 500 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDT 679
+RK A+ C LQGF ++ +Y + F+V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 680 VVXPYNATLS 709
VV PYN+ LS
Sbjct: 181 VVEPYNSVLS 190
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 150 bits (363), Expect = 1e-36
Identities = 76/190 (40%), Positives = 105/190 (55%), Gaps = 2/190 (1%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGK 319
MRE + I GQ G Q+G WE+ EHGI G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 320 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 499
+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 500 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDT 679
+RK A+ C LQGF ++ +Y + F+V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 680 VVXPYNATLS 709
VV PYN+ LS
Sbjct: 181 VVEPYNSVLS 190
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 133 bits (322), Expect = 1e-31
Identities = 63/191 (32%), Positives = 108/191 (56%), Gaps = 3/191 (1%)
Frame = +2
Query: 149 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYVP 328
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 329 RAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 502
RA+++DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 503 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSP-KVSDT 679
+ +EA+G D L+GF + + Y +++ T+SV P+ + SD
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
Query: 680 VVXPYNATLSV 712
VV PYN+ L++
Sbjct: 182 VVQPYNSLLTL 192
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 133 bits (321), Expect = 1e-31
Identities = 63/191 (32%), Positives = 108/191 (56%), Gaps = 3/191 (1%)
Frame = +2
Query: 149 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYVP 328
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 329 RAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 502
RA+++DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 503 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSP-KVSDT 679
+ +EA+G D L+GF + + Y +++ T+SV P+ + SD
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
Query: 680 VVXPYNATLSV 712
VV PYN+ L++
Sbjct: 182 VVQPYNSLLTL 192
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 31.9 bits (69), Expect = 0.43
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDA---TGAYSGDSDLQLERINVYYNEASG- 313
MREIV IQ G+ N +G+ FW + G+ + + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 314 GKYVPRAVMVDLEP--GTMDS 370
Y PR V V+L+ GTM S
Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +2
Query: 479 LVDSVLDVVRKEAEGCDCLQGF 544
+++SV VVRKEAE C+CLQ F
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At2g26850.1 68415.m03221 F-box family protein contains Pfam
PF00646: F-box domain; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 371
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 208 PELCSDLIPALTRLDVDDFPHDCTKNLEPP 119
P+L S ++ ++ LD+ D P DC L PP
Sbjct: 50 PDLASPVLGKMSILDLPDLPLDCILELLPP 79
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 29.1 bits (62), Expect = 3.1
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Frame = -1
Query: 497 PVPNQPVQPPLCNVLSP-SYSPPQTVRRRSCPVGRFAQ---TARNGRSPWFQAQGPPSQL 330
P P+ P+ P L P S +PP S P+ T N RSP QGPP+
Sbjct: 54 PPPSSPLPPSLPPPSPPGSLTPPLPQPSPSAPITPSPPSPTTPSNPRSPPSPNQGPPNTP 113
Query: 329 AGRT 318
+G T
Sbjct: 114 SGST 117
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 28.7 bits (61), Expect = 4.0
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = +3
Query: 153 KSSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLNASMSTITKLQGAST 323
K TS AG+R SSG TS TP + TPT S + ++T +ST
Sbjct: 133 KPQTSSSSVAGLRRPSSSGSSRSTSRPATP-TRRSTTPTTSTSRPVTTRASNSRSST 188
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +2
Query: 194 GAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYVPRAVMV 343
G + W I+ + TG Y DL ER+++ +++A +Y P ++
Sbjct: 45 GPEGWGKINPHWKVCNTGRYQSPIDLTNERVSLIHDQAWTRQYKPAPAVI 94
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 152 EIVHIQAGQCGNQIGAKFWEVISD 223
+I++ A + G+ GA FWEVIS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta repeat;
similar to Coatomer alpha subunit (Alpha-coat protein)
(Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621) [Homo sapiens]
Length = 1216
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 592 SFDFQNP*RVSRSYYEYVFRGTKSKGFRYC 681
++DF+NP V S Y ++RG K YC
Sbjct: 1151 NYDFRNPFVVCGSTYVPIYRGQKDVSCPYC 1180
>At5g57070.1 68418.m07124 hydroxyproline-rich glycoprotein family
protein Common family members: At5g26070, At5g19800,
At1g72790 [Arabidopsis thaliana]
Length = 575
Score = 27.5 bits (58), Expect = 9.3
Identities = 26/95 (27%), Positives = 34/95 (35%), Gaps = 5/95 (5%)
Frame = -1
Query: 503 LHPVPNQPVQPPLCNVLSPSYSPPQTVRR----RSCPVGRFAQTARNGRSPWFQ-AQGPP 339
+H VP P PP +PP+ V+ R F + SP Q PP
Sbjct: 417 IHSVPAPPPPPPPRYTQFDPQTPPRRVKSGRPPRPTKPKNFNEENNGQGSPLIQITPPPP 476
Query: 338 SQLAGRTCPLKLRYSRH*CVQAAGRSRRCKHPWRQ 234
R PLK S + +S RC P R+
Sbjct: 477 PPPPFRVPPLKYVVSGDFAKIRSNQSSRCSSPERE 511
>At1g69500.1 68414.m07986 cytochrome P450 family protein similar to
Cytochrome P450 86A2 (SP:O23066) [Arabidopsis
thaliana]contains Pfam profile: PF00067: Cytochrome P450
Length = 478
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 500 HPVPNQPVQPPLCNVLSPSYSPPQTVRRRS 411
H VPN PV+ + +LS ++ TV RRS
Sbjct: 449 HLVPNHPVKYRMMTILSMAHGLKVTVSRRS 478
>At1g54970.1 68414.m06278 proline-rich family protein similar to
proline-rich protein GI:170048 from [Glycine max]
Length = 335
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 497 PVPNQPVQPPLCNVLSPSYSPP 432
PV +P PP SPSYSPP
Sbjct: 169 PVYTKPTLPPPVYKKSPSYSPP 190
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -3
Query: 438 PAPDCPKTKLSGRKICPNGPERTESMVPG-SRSTITARGT 322
PAP P L ICP+G + M SRS + GT
Sbjct: 129 PAPTSPANVLPTGNICPSGKIQITGMTQSRSRSDVLGSGT 168
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,484,800
Number of Sequences: 28952
Number of extensions: 368936
Number of successful extensions: 1247
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1207
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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