Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10d01
(689 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC028139-1|AAH28139.1| 888|Homo sapiens ATPase, Ca++ transporti... 32 2.2
AY268375-1|AAP30009.1| 949|Homo sapiens secretory pathway Ca2+/... 32 2.2
AY268374-1|AAP30008.1| 939|Homo sapiens secretory pathway Ca2+/... 32 2.2
AF225981-1|AAF35375.1| 923|Homo sapiens calcium transport ATPas... 32 2.2
AF189723-1|AAF27813.2| 903|Homo sapiens calcium transport ATPas... 32 2.2
AF181121-1|AAF26296.1| 888|Homo sapiens ATP-dependent Ca2+ pump... 32 2.2
AF181120-1|AAF26295.1| 919|Homo sapiens ATP-dependent Ca2+ pump... 32 2.2
AB037768-1|BAA92585.1| 918|Homo sapiens KIAA1347 protein protein. 32 2.2
AK098165-1|BAC05248.1| 422|Homo sapiens protein ( Homo sapiens ... 31 3.9
AK074692-1|BAC11142.1| 865|Homo sapiens protein ( Homo sapiens ... 31 3.9
>BC028139-1|AAH28139.1| 888|Homo sapiens ATPase, Ca++ transporting,
type 2C, member 1 protein.
Length = 888
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 522 QLKRTKSRELRGGIMYYSCHCIKRNGLQHDCRRTGCSGEPTCLALPDPLCAPSQL 686
+ + KS E ++ CHC++ L+H R G+ CL++ D + A +L
Sbjct: 121 EYRSEKSLEELSKLVPPECHCVREGKLEHTLARDLVPGDTVCLSVGDRVPADLRL 175
>AY268375-1|AAP30009.1| 949|Homo sapiens secretory pathway
Ca2+/Mn2+ transport ATPase SPCA1d protein protein.
Length = 949
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 522 QLKRTKSRELRGGIMYYSCHCIKRNGLQHDCRRTGCSGEPTCLALPDPLCAPSQL 686
+ + KS E ++ CHC++ L+H R G+ CL++ D + A +L
Sbjct: 121 EYRSEKSLEELSKLVPPECHCVREGKLEHTLARDLVPGDTVCLSVGDRVPADLRL 175
>AY268374-1|AAP30008.1| 939|Homo sapiens secretory pathway
Ca2+/Mn2+ transport ATPase SPCA1b protein protein.
Length = 939
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 522 QLKRTKSRELRGGIMYYSCHCIKRNGLQHDCRRTGCSGEPTCLALPDPLCAPSQL 686
+ + KS E ++ CHC++ L+H R G+ CL++ D + A +L
Sbjct: 121 EYRSEKSLEELSKLVPPECHCVREGKLEHTLARDLVPGDTVCLSVGDRVPADLRL 175
>AF225981-1|AAF35375.1| 923|Homo sapiens calcium transport ATPase
ATP2C1 protein.
Length = 923
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 522 QLKRTKSRELRGGIMYYSCHCIKRNGLQHDCRRTGCSGEPTCLALPDPLCAPSQL 686
+ + KS E ++ CHC++ L+H R G+ CL++ D + A +L
Sbjct: 105 EYRSEKSLEELSKLVPPECHCVREGKLEHTLARDLVPGDTVCLSVGDRVPADLRL 159
>AF189723-1|AAF27813.2| 903|Homo sapiens calcium transport ATPase
ATP2C1 protein.
Length = 903
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 522 QLKRTKSRELRGGIMYYSCHCIKRNGLQHDCRRTGCSGEPTCLALPDPLCAPSQL 686
+ + KS E ++ CHC++ L+H R G+ CL++ D + A +L
Sbjct: 105 EYRSEKSLEELSKLVPPECHCVREGKLEHTLARDLVPGDTVCLSVGDRVPADLRL 159
>AF181121-1|AAF26296.1| 888|Homo sapiens ATP-dependent Ca2+ pump
PMR1 protein.
Length = 888
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 522 QLKRTKSRELRGGIMYYSCHCIKRNGLQHDCRRTGCSGEPTCLALPDPLCAPSQL 686
+ + KS E ++ CHC++ L+H R G+ CL++ D + A +L
Sbjct: 121 EYRSEKSLEELSKLVPPECHCVREGKLEHTLARDLVPGDTVCLSVGDRVPADLRL 175
>AF181120-1|AAF26295.1| 919|Homo sapiens ATP-dependent Ca2+ pump
PMR1 protein.
Length = 919
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 522 QLKRTKSRELRGGIMYYSCHCIKRNGLQHDCRRTGCSGEPTCLALPDPLCAPSQL 686
+ + KS E ++ CHC++ L+H R G+ CL++ D + A +L
Sbjct: 121 EYRSEKSLEELSKLVPPECHCVREGKLEHTLARDLVPGDTVCLSVGDRVPADLRL 175
>AB037768-1|BAA92585.1| 918|Homo sapiens KIAA1347 protein protein.
Length = 918
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 522 QLKRTKSRELRGGIMYYSCHCIKRNGLQHDCRRTGCSGEPTCLALPDPLCAPSQL 686
+ + KS E ++ CHC++ L+H R G+ CL++ D + A +L
Sbjct: 120 EYRSEKSLEELSKLVPPECHCVREGKLEHTLARDLVPGDTVCLSVGDRVPADLRL 174
>AK098165-1|BAC05248.1| 422|Homo sapiens protein ( Homo sapiens
cDNA FLJ40846 fis, clone TRACH2014544. ).
Length = 422
Score = 31.1 bits (67), Expect = 3.9
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +3
Query: 468 GNSGAEEGGSKKKDENENQLKRTKSRELRGGIMYYSC-HCIKRNGLQHDCRRTGCSGEPT 644
G G GG + + R +R RG + ++S H I+ +QH+C R G + P
Sbjct: 66 GRGGPASGGLCRALRSYALCTRRTARTCRGDLAFHSAVHGIEDLMIQHNCSRQGPTASPP 125
Query: 645 CLALPDPLCAPSQL 686
P P+ L
Sbjct: 126 ARGPALPGAGPAPL 139
>AK074692-1|BAC11142.1| 865|Homo sapiens protein ( Homo sapiens
cDNA FLJ90211 fis, clone MAMMA1002095, highly similar to
Calcium-transporting ATPase type 2C, member 1 (EC
3.6.3.8). ).
Length = 865
Score = 31.1 bits (67), Expect = 3.9
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 522 QLKRTKSRELRGGIMYYSCHCIKRNGLQHDCRRTGCSGEPTCLALPDPLCAPSQL 686
+ + KS E ++ CHC++ L+H R G+ CL++ D + A +L
Sbjct: 37 EYRSEKSLEELSKLVPPECHCVREGKLEHILARDLVPGDTVCLSVGDRVPADLRL 91
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,860,367
Number of Sequences: 237096
Number of extensions: 2070711
Number of successful extensions: 4859
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4859
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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