Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10c24
(681 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondria... 132 6e-30
UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondria... 132 1e-29
UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondr... 128 1e-28
UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellu... 126 4e-28
UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellu... 124 2e-27
UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellul... 119 8e-26
UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellul... 118 1e-25
UniRef50_A1ZPD5 Cluster: ATP synthase F1, beta subunit; n=4; Bac... 113 3e-24
UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5; Bactero... 110 3e-23
UniRef50_Q9MTQ2 Cluster: ATP synthase subunit beta; n=2; Amphidi... 105 8e-22
UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasm... 94 3e-18
UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasm... 93 6e-18
UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27; Ba... 86 7e-16
UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1; Azo... 86 7e-16
UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3; Legio... 83 5e-15
UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9; Mycoplasm... 78 2e-13
UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5; Mycop... 71 2e-11
UniRef50_O54249 Cluster: Flagellum-specific ATP synthase; n=8; A... 48 2e-04
UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1; S... 48 3e-04
UniRef50_Q2I6N8 Cluster: ATP synthase beta chain; n=2; Gonyaulax... 48 3e-04
UniRef50_Q4PJ51 Cluster: Predicted F0F1-type ATP synthase beta s... 46 9e-04
UniRef50_Q52371 Cluster: Type III secretion ATP synthase hrcN; n... 45 0.001
UniRef50_O83417 Cluster: Flagellum-specific ATP synthase; n=42; ... 45 0.001
UniRef50_A0Z379 Cluster: ATPase FliI/YscN; n=1; marine gamma pro... 45 0.002
UniRef50_Q81SH1 Cluster: Flagellum-specific ATP synthase, putati... 44 0.003
UniRef50_O07025 Cluster: Flagellum-specific ATP synthase; n=24; ... 44 0.005
UniRef50_Q0C5J4 Cluster: Flagellar protein export ATPase FliI; n... 43 0.008
UniRef50_P74857 Cluster: Probable secretion system apparatus ATP... 41 0.024
UniRef50_Q6D5F7 Cluster: Type III secretion protein; n=10; Enter... 40 0.042
UniRef50_Q2CGJ3 Cluster: Flagellum-specific ATP synthase; n=1; O... 40 0.042
UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n... 40 0.056
UniRef50_A6FKZ2 Cluster: Flagellum-specific ATP synthase; n=1; R... 40 0.056
UniRef50_Q12T73 Cluster: ATPase FliI/YscN; n=1; Shewanella denit... 40 0.074
UniRef50_Q7UIJ0 Cluster: Flagellum-specific ATP synthase; n=3; P... 39 0.098
UniRef50_A3WGS0 Cluster: FliI, Flagellum-specific ATPase; n=2; E... 39 0.098
UniRef50_Q2SEY6 Cluster: Flagellum-specific ATP synthase; n=1; H... 39 0.13
UniRef50_P26465 Cluster: Flagellum-specific ATP synthase; n=258;... 37 0.40
UniRef50_Q2IQ94 Cluster: Sodium-transporting two-sector ATPase; ... 37 0.52
UniRef50_Q1GNY4 Cluster: ATPase FliI/YscN; n=6; Bacteria|Rep: AT... 36 0.69
UniRef50_A4HP93 Cluster: Putative uncharacterized protein; n=2; ... 36 1.2
UniRef50_Q9EZ19 Cluster: SpaL/InvC; n=4; Enterobacteriaceae|Rep:... 35 1.6
UniRef50_A5FHZ4 Cluster: Putative uncharacterized protein precur... 35 1.6
UniRef50_P55717 Cluster: Probable ATP synthase y4yI; n=27; Bacte... 35 1.6
UniRef50_UPI0000EB4335 Cluster: UPI0000EB4335 related cluster; n... 35 2.1
UniRef50_Q63K04 Cluster: Kumamolisin; n=33; Burkholderia|Rep: Ku... 35 2.1
UniRef50_Q3J9F4 Cluster: Sodium-transporting two-sector ATPase; ... 34 2.8
UniRef50_UPI0000F341A8 Cluster: UPI0000F341A8 related cluster; n... 34 3.7
UniRef50_Q1CVR3 Cluster: Putative uncharacterized protein; n=1; ... 34 3.7
UniRef50_A1SEP6 Cluster: ATPase, FliI/YscN family; n=10; Bacteri... 34 3.7
UniRef50_Q67G29 Cluster: Cyclase; n=1; Streptomyces griseoruber|... 33 4.9
UniRef50_O88737 Cluster: Protein bassoon; n=13; Euteleostomi|Rep... 33 4.9
UniRef50_A7HIT8 Cluster: Putative uncharacterized protein; n=2; ... 33 6.4
UniRef50_UPI0000E48CBD Cluster: PREDICTED: hypothetical protein;... 33 8.5
UniRef50_Q02CE4 Cluster: Tannase and feruloyl esterase precursor... 33 8.5
UniRef50_A7RXQ2 Cluster: Predicted protein; n=1; Nematostella ve... 33 8.5
UniRef50_Q7VQZ9 Cluster: Tryptophan synthase alpha chain; n=2; C... 33 8.5
>UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=3027; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Homo sapiens
(Human)
Length = 529
Score = 132 bits (320), Expect = 6e-30
Identities = 73/119 (61%), Positives = 87/119 (73%), Gaps = 14/119 (11%)
Frame = +3
Query: 366 LDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFEGRGGR------ 512
L +T+AE+FRD+EGQD+LLFIDNIFRFTQAGSEV R S+ ++
Sbjct: 284 LTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQ 343
Query: 513 ---FTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPLD 680
T K ++++A+YVPADDLTDPAPATTFAHLDATTVLS AIAELG+YPAVDPLD
Sbjct: 344 ERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLD 402
Score = 39.1 bits (87), Expect = 0.098
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +1
Query: 304 TRASLVYGQKDEPHGARARVALTG 375
++ +LVYGQ +EP GARARVALTG
Sbjct: 263 SKVALVYGQMNEPPGARARVALTG 286
>UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=14; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 511
Score = 132 bits (318), Expect = 1e-29
Identities = 73/119 (61%), Positives = 86/119 (72%), Gaps = 14/119 (11%)
Frame = +3
Query: 366 LDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFEGRGGR------ 512
L +T+AE+FRDEEGQD+LLFIDNIFRFTQAGSEV R S+ ++
Sbjct: 267 LTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQ 326
Query: 513 ---FTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPLD 680
T K ++++AVYVPADDLTDPAPATTFAHLDATTVLS I+ELG+YPAVDPLD
Sbjct: 327 ERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLD 385
Score = 39.9 bits (89), Expect = 0.056
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = +1
Query: 295 ELETRASLVYGQKDEPHGARARVALTG 375
E E++ +LV+GQ +EP GARARVALTG
Sbjct: 243 EGESKVALVFGQMNEPPGARARVALTG 269
>UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondrial
precursor; n=1793; root|Rep: ATP synthase subunit
beta-3, mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 559
Score = 128 bits (309), Expect = 1e-28
Identities = 71/120 (59%), Positives = 85/120 (70%), Gaps = 14/120 (11%)
Frame = +3
Query: 363 GLDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFEGRGGR----- 512
GL +T+AE+FRD EGQD+LLFIDNIFRFTQA SEV R S+ ++
Sbjct: 313 GLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLASDLGAL 372
Query: 513 ----FTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPLD 680
T K ++++A+YVPADDLTDPAPATTFAHLDATTVLS I+ELG+YPAVDPLD
Sbjct: 373 QERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLD 432
Score = 40.7 bits (91), Expect = 0.032
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1
Query: 289 EYELETRASLVYGQKDEPHGARARVALTG 375
E + E++ +LVYGQ +EP GARARV LTG
Sbjct: 288 EKQSESKCALVYGQMNEPPGARARVGLTG 316
>UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellular
organisms|Rep: ATP synthase subunit beta - Gluconobacter
oxydans (Gluconobacter suboxydans)
Length = 487
Score = 126 bits (305), Expect = 4e-28
Identities = 71/119 (59%), Positives = 87/119 (73%), Gaps = 14/119 (11%)
Frame = +3
Query: 366 LDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFEGR-----GG-- 509
L ++LAE+FRDEEGQD+L F+DNIFRFTQAGSEV R S+ ++ G
Sbjct: 244 LTGLSLAEYFRDEEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGALQ 303
Query: 510 -RFT-VKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPLD 680
R T K ++++AVYVPADDLTDPAPA TFAHLDATTVL+ +IAE+G+YPAVDPLD
Sbjct: 304 ERITSTKKGSITSVQAVYVPADDLTDPAPAATFAHLDATTVLNRSIAEMGIYPAVDPLD 362
Score = 37.9 bits (84), Expect = 0.23
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +1
Query: 304 TRASLVYGQKDEPHGARARVALTG 375
++ +LVYGQ +EP GAR+RVALTG
Sbjct: 223 SKVALVYGQMNEPPGARSRVALTG 246
>UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellular
organisms|Rep: ATP synthase subunit beta - Zymomonas
mobilis
Length = 484
Score = 124 bits (300), Expect = 2e-27
Identities = 68/119 (57%), Positives = 88/119 (73%), Gaps = 14/119 (11%)
Frame = +3
Query: 366 LDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFE-------GR-G 506
L +T+AE+FRD+EGQD+L F+DNIFRFTQAG+EV R S+ ++ G+
Sbjct: 240 LSGLTMAEYFRDQEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGQLQ 299
Query: 507 GRFT-VKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPLD 680
R T K ++++A+YVPADDLTDPAPA +FAHLDATTVLS AI+E+G+YPAVDPLD
Sbjct: 300 ERITSTKKGSITSVQAIYVPADDLTDPAPAASFAHLDATTVLSRAISEMGIYPAVDPLD 358
Score = 37.5 bits (83), Expect = 0.30
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +1
Query: 304 TRASLVYGQKDEPHGARARVALTG 375
++ +LVYGQ +EP GARARVAL+G
Sbjct: 219 SKVALVYGQMNEPPGARARVALSG 242
>UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellular
organisms|Rep: ATP synthase subunit beta - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 504
Score = 119 bits (286), Expect = 8e-26
Identities = 67/119 (56%), Positives = 86/119 (72%), Gaps = 14/119 (11%)
Frame = +3
Query: 366 LDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFEGR----GGRFT 518
L +T+AE FRDE GQD+L F+DNIFRFTQAGSEV R S+ ++ G+
Sbjct: 261 LTGLTVAEQFRDE-GQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQ 319
Query: 519 VKLSLRS-----NLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPLD 680
+++ + +++A+YVPADDLTDPAPAT+FAHLDATTVLS +IAE G+YPAVDPLD
Sbjct: 320 ERITTTTKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLD 378
Score = 40.7 bits (91), Expect = 0.032
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +1
Query: 304 TRASLVYGQKDEPHGARARVALTG 375
++A+LVYGQ +EP GARARVALTG
Sbjct: 240 SKAALVYGQMNEPPGARARVALTG 263
>UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellular
organisms|Rep: ATP synthase subunit beta -
Fervidobacterium islandicum
Length = 472
Score = 118 bits (285), Expect = 1e-25
Identities = 75/155 (48%), Positives = 93/155 (60%), Gaps = 14/155 (9%)
Frame = +3
Query: 258 NQEFLEVIFAGVRAGDPGVPGIRPEG*APRGACPGGLDRVTLAEHFRDEEGQDLLLFIDN 437
N +LE+ AGV V G E P L +T+AE+FRD EG+D+LLFIDN
Sbjct: 193 NDLYLEMTEAGVLNNTVLVFGQMNE--PPGARFRVALTALTIAEYFRDVEGRDVLLFIDN 250
Query: 438 IFRFTQAGSEVR--------------TRSSYQFEGRGGRFTVKLSLRSNLKAVYVPADDL 575
IFRF QAGSEV T S+ E + + K ++++A+YVPADD+
Sbjct: 251 IFRFVQAGSEVSALLGRMPSAVGYQPTLSTDMGELQERITSTKKGSITSVQAIYVPADDI 310
Query: 576 TDPAPATTFAHLDATTVLSPAIAELGVYPAVDPLD 680
TDPAPATTF HLDAT VLS +A LG+YPAVDPLD
Sbjct: 311 TDPAPATTFTHLDATIVLSRQLAALGLYPAVDPLD 345
>UniRef50_A1ZPD5 Cluster: ATP synthase F1, beta subunit; n=4;
Bacteroidetes|Rep: ATP synthase F1, beta subunit -
Microscilla marina ATCC 23134
Length = 505
Score = 113 bits (273), Expect = 3e-24
Identities = 67/123 (54%), Positives = 83/123 (67%), Gaps = 18/123 (14%)
Frame = +3
Query: 366 LDRVTLAEHFRDEEG----QDLLLFIDNIFRFTQAGSEV-----RTRSSYQFEGRGG--- 509
L +++AE+FRD +G D+L FIDNIFRFTQAGSEV R S+ ++
Sbjct: 253 LSGLSIAEYFRDGDGTGKGNDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEM 312
Query: 510 -----RFT-VKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVD 671
R T K ++++A+YVPADDLTDPAPATTFAHLDATTVLS +A LG+YPAVD
Sbjct: 313 GVMQERITSTKRGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRKLASLGIYPAVD 372
Query: 672 PLD 680
PLD
Sbjct: 373 PLD 375
Score = 37.9 bits (84), Expect = 0.23
Identities = 16/25 (64%), Positives = 22/25 (88%)
Frame = +1
Query: 301 ETRASLVYGQKDEPHGARARVALTG 375
E++A+ V+GQ +EP GARARVAL+G
Sbjct: 231 ESKATFVFGQMNEPPGARARVALSG 255
>UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5;
Bacteroides|Rep: ATP synthase subunit beta - Bacteroides
fragilis
Length = 505
Score = 110 bits (265), Expect = 3e-23
Identities = 67/123 (54%), Positives = 80/123 (65%), Gaps = 18/123 (14%)
Frame = +3
Query: 366 LDRVTLAEHFRD----EEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFE------- 497
L +T+AE FRD +D+L FIDNIFRFTQAGSEV R S+ ++
Sbjct: 256 LSGLTVAESFRDMGAKSGARDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEM 315
Query: 498 -GRGGRFT-VKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVD 671
R T K ++++AVYVPADDLTDPAPATTF HLDATTVLS I ELG+YPAVD
Sbjct: 316 GAMQERITSTKTGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVD 375
Query: 672 PLD 680
PL+
Sbjct: 376 PLE 378
Score = 35.1 bits (77), Expect = 1.6
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = +1
Query: 301 ETRASLVYGQKDEPHGARARVALTG 375
+++A+LV+GQ +EP GARA VAL+G
Sbjct: 234 KSQATLVFGQMNEPPGARASVALSG 258
>UniRef50_Q9MTQ2 Cluster: ATP synthase subunit beta; n=2;
Amphidinium|Rep: ATP synthase subunit beta - Amphidinium
operculatum (Dinoflagellate)
Length = 548
Score = 105 bits (253), Expect = 8e-22
Identities = 57/115 (49%), Positives = 73/115 (63%), Gaps = 14/115 (12%)
Frame = +3
Query: 375 VTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEVRTRSSYQFEGRGGRFTVKLSLRS----- 539
+T+AE+FRD GQDLL+F+DNIFRF QAGSE+ T G + T+ + +
Sbjct: 320 LTMAEYFRDVNGQDLLVFMDNIFRFVQAGSELSTLLGRMPSAVGYQPTLATEMGTLQERI 379
Query: 540 ---------NLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPL 677
+++AVYVPADD+TDPAP F HLDA TVLS +A G+YPAVDPL
Sbjct: 380 VPTLFGSITSIQAVYVPADDITDPAPVAIFTHLDAITVLSRGLAAKGIYPAVDPL 434
>UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasma
mobile|Rep: ATP synthase beta chain - Mycoplasma mobile
Length = 784
Score = 93.9 bits (223), Expect = 3e-18
Identities = 49/120 (40%), Positives = 77/120 (64%), Gaps = 14/120 (11%)
Frame = +3
Query: 363 GLDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFE----GRGGRF 515
G+ V +AE+FR+ G+ +LLF+DNIFR+ QAGSE+ +T S+ ++ G+
Sbjct: 523 GISGVKVAEYFRNNLGKSVLLFMDNIFRYVQAGSEISSLLEKTPSAVGYQPTLFSEMGQL 582
Query: 516 TVKLSLR-----SNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPLD 680
+++ ++++A+Y+PADD TDPA FAH D+T +LS +A GVYPA+DPL+
Sbjct: 583 QERINSTKDGDITSIQAMYIPADDFTDPAAVAAFAHFDSTIILSRQLAAEGVYPAIDPLE 642
>UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasma
pulmonis|Rep: ATP SYNTHASE BETA CHAIN - Mycoplasma
pulmonis
Length = 698
Score = 93.1 bits (221), Expect = 6e-18
Identities = 51/119 (42%), Positives = 76/119 (63%), Gaps = 14/119 (11%)
Frame = +3
Query: 363 GLDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFE----GRGGRF 515
G V +AE+FR+ G+++LLF+DNIFR+ QAGSEV +T S+ ++ G+
Sbjct: 435 GFTGVKVAEYFRNNLGKNVLLFMDNIFRYMQAGSEVSSLLEKTPSAVGYQPMLVSEIGKL 494
Query: 516 TVKLSLR-----SNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPL 677
+++ ++++A+Y+PADD TDPA FAH DAT +LS +A G+YPAVDPL
Sbjct: 495 QERINSNNDGDITSIQAMYIPADDFTDPAAVAAFAHFDATIILSRQLAAEGLYPAVDPL 553
>UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27;
Bacteria|Rep: ATP synthase F1, beta subunit -
Burkholderia mallei (Pseudomonas mallei)
Length = 534
Score = 86.2 bits (204), Expect = 7e-16
Identities = 51/118 (43%), Positives = 72/118 (61%), Gaps = 14/118 (11%)
Frame = +3
Query: 366 LDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEVR-------TRSSYQ------FEGRG 506
L + +AE+FRDE Q++LL +DN+FRF QAG+EV +R YQ
Sbjct: 257 LTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQ 316
Query: 507 GRF-TVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPL 677
R +V+ + + ++AVYVPADD TDPA AH+D+ VLS A+A G+YPA+DP+
Sbjct: 317 ERIASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPV 374
>UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1;
Azotobacter vinelandii AvOP|Rep: ATP synthase F1, beta
subunit - Azotobacter vinelandii AvOP
Length = 473
Score = 86.2 bits (204), Expect = 7e-16
Identities = 51/118 (43%), Positives = 70/118 (59%), Gaps = 14/118 (11%)
Frame = +3
Query: 366 LDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFEGRGGRFTVKLS 530
L +++AE+FRDE Q++LL +DN+FRF QAG+EV R S ++ L
Sbjct: 227 LTALSIAEYFRDERRQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGYQPTLADEVAALQ 286
Query: 531 LR---------SNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPL 677
R + ++AVYVPADD TDPA AH+D+ VLS A+A G+YPAVDP+
Sbjct: 287 ERIVSVGGVAVTAIEAVYVPADDFTDPAVTALAAHVDSMVVLSRAMAAQGMYPAVDPI 344
>UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3;
Legionella pneumophila|Rep: ATP synthase F1, beta chain
- Legionella pneumophila (strain Corby)
Length = 474
Score = 83.4 bits (197), Expect = 5e-15
Identities = 50/119 (42%), Positives = 69/119 (57%), Gaps = 14/119 (11%)
Frame = +3
Query: 363 GLDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFEGRGGRFTVKL 527
GL +T AE+ RD G ++L +DNI+RF QAGSE+ R +S ++ +L
Sbjct: 240 GLSALTYAEYLRDTLGHEVLFLVDNIYRFVQAGSEISGLLGRMPASVGYQPTLMTEIAEL 299
Query: 528 SLR---------SNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPL 677
R ++++AVYVPADD++DPA HLD+ VLS A A G+YPAVDPL
Sbjct: 300 EERMTSTAKGAVTSVQAVYVPADDMSDPAVTGIITHLDSIIVLSRAQAGKGIYPAVDPL 358
>UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9;
Mycoplasmataceae|Rep: ATP SYNTHASE BETA CHAIN -
Mycoplasma pulmonis
Length = 468
Score = 78.2 bits (184), Expect = 2e-13
Identities = 47/115 (40%), Positives = 67/115 (58%), Gaps = 14/115 (12%)
Frame = +3
Query: 375 VTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEVRTRSSYQFEGRGGRFTV---------KL 527
+T AE+ RD E +++LLFIDNI+RF QA SEV + G + T+ +L
Sbjct: 231 ITAAEYLRDREKENVLLFIDNIYRFVQASSEVSATLGKKPSLGGYQPTLDTEVSFVHDRL 290
Query: 528 SLRSN-----LKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPL 677
L +N + V++P DDLTDP+ + F+HLD++ VLS A +YPA DPL
Sbjct: 291 FLNANGSITTFETVFLPMDDLTDPSAVSIFSHLDSSMVLSRDQAAKNIYPAFDPL 345
>UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5;
Mycoplasma|Rep: ATP synthase subunit beta 2 - Mycoplasma
pulmonis
Length = 468
Score = 71.3 bits (167), Expect = 2e-11
Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 14/115 (12%)
Frame = +3
Query: 375 VTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEVRTRSSYQFEGRGGRFTVKLSLRS----- 539
+T AE+ RD E +D+L F+DNI+R+ QAG E+ + G + T+ + S
Sbjct: 223 ITAAEYARDSEQKDVLFFVDNIYRYLQAGRELSFSLGKKPSEAGYQATLVSDISSVQERL 282
Query: 540 ---------NLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPL 677
+ + V++P DDL DPA HLD++ VLS I G++PA+DPL
Sbjct: 283 ANSKHGSITSFQTVFLPMDDLNDPASVAILNHLDSSLVLSREIFAEGLFPAIDPL 337
>UniRef50_O54249 Cluster: Flagellum-specific ATP synthase; n=8;
Alphaproteobacteria|Rep: Flagellum-specific ATP synthase
- Rhizobium meliloti (Sinorhizobium meliloti)
Length = 467
Score = 48.4 bits (110), Expect = 2e-04
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 16/120 (13%)
Frame = +3
Query: 366 LDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEVRTRSSYQFEGRGGRFTVKLSLRSNL 545
L VT+AEH+RD +G ++LL +D++ RF A EV T + RG +V L L
Sbjct: 248 LTAVTIAEHYRD-KGDNVLLIVDSVTRFAHAIREVATAAGEPPIARGYPASVFTELPRLL 306
Query: 546 K----------------AVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPL 677
+ ++ V D+ DP + LD VL ++AE G YP V+PL
Sbjct: 307 ERAGPGAEGAGTITAIISILVDGDNHNDPVADSARGILDGHIVLDRSLAEEGRYPPVNPL 366
>UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1;
Symbiobacterium thermophilum|Rep: Flagellar-specific ATP
synthase - Symbiobacterium thermophilum
Length = 436
Score = 47.6 bits (108), Expect = 3e-04
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 14/113 (12%)
Frame = +3
Query: 381 LAEHFRDEEGQDLLLFIDNIFRFTQAGSEVRTRSSYQFEGRGGRFTVKLSL-----RS-- 539
+AE+FRD G D++L +D++ R A EV RG +V L RS
Sbjct: 236 IAEYFRDAHGLDVILMMDSVTRLAHAQREVGLAVGEPPATRGYTPSVFAMLPRVLERSGT 295
Query: 540 ----NLKAVY---VPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPL 677
++ VY V DD+ +P + LD VLS +A G YPA+DPL
Sbjct: 296 GPAGSVTGVYTVLVDGDDMNEPVADAVRSILDGHVVLSRKLANAGHYPAIDPL 348
>UniRef50_Q2I6N8 Cluster: ATP synthase beta chain; n=2; Gonyaulax
polyedra|Rep: ATP synthase beta chain - Gonyaulax
polyedra (Dinoflagellate)
Length = 253
Score = 47.6 bits (108), Expect = 3e-04
Identities = 20/33 (60%), Positives = 23/33 (69%)
Frame = +3
Query: 582 PAPATTFAHLDATTVLSPAIAELGVYPAVDPLD 680
PAP F HLDA TVLS +A G+YPAVDP +
Sbjct: 63 PAPVVIFGHLDAVTVLSRVLAAKGIYPAVDPFN 95
>UniRef50_Q4PJ51 Cluster: Predicted F0F1-type ATP synthase beta
subunit; n=1; uncultured bacterium eBACred22E04|Rep:
Predicted F0F1-type ATP synthase beta subunit -
uncultured bacterium eBACred22E04
Length = 198
Score = 46.0 bits (104), Expect = 9e-04
Identities = 23/48 (47%), Positives = 29/48 (60%)
Frame = +3
Query: 537 SNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPLD 680
++++ VYV D T P T HLDAT VLS A LG+ P+VD LD
Sbjct: 60 TSIQTVYVSTDARTHPIATRTSTHLDATVVLSRNNAGLGISPSVDTLD 107
>UniRef50_Q52371 Cluster: Type III secretion ATP synthase hrcN;
n=18; Pseudomonas|Rep: Type III secretion ATP synthase
hrcN - Pseudomonas syringae pv. syringae
Length = 449
Score = 45.2 bits (102), Expect = 0.001
Identities = 37/112 (33%), Positives = 51/112 (45%), Gaps = 15/112 (13%)
Frame = +3
Query: 381 LAEHFRDEEGQDLLLFIDNIFRFTQAGSEVRTRSSYQFEGRGG----------RFTVKLS 530
+AE FR GQ +LL +D++ RF +A E+ S GRGG R +
Sbjct: 249 IAEAFR-ARGQKVLLLLDSLTRFARAQREIGIASGEPL-GRGGLPPSVYTLLPRLVERAG 306
Query: 531 LRSN-----LKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVD 671
+ N L V + D + DP + LD VLS +AE G YPA+D
Sbjct: 307 MSENGSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAID 358
>UniRef50_O83417 Cluster: Flagellum-specific ATP synthase; n=42;
Bacteria|Rep: Flagellum-specific ATP synthase -
Treponema pallidum
Length = 447
Score = 45.2 bits (102), Expect = 0.001
Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 14/127 (11%)
Frame = +3
Query: 339 APRGACPGGLDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEVRTRSSYQFEGRG---G 509
+P G +AE+FRD +G+ +LL D++ RF +A E+ S RG G
Sbjct: 227 SPLARVRGAYTATAIAEYFRD-QGKQVLLLFDSLTRFAKAQREIGLASGELPATRGYTPG 285
Query: 510 RFTV--KLSLRS------NLKAVY---VPADDLTDPAPATTFAHLDATTVLSPAIAELGV 656
F KL R+ ++ A Y V DDL +P +D VLS A+A+
Sbjct: 286 VFETLPKLLERAGSFSMGSVTAFYTVLVDGDDLDEPISDAVRGIVDGHIVLSRALAQRNH 345
Query: 657 YPAVDPL 677
YPA+D L
Sbjct: 346 YPAIDVL 352
>UniRef50_A0Z379 Cluster: ATPase FliI/YscN; n=1; marine gamma
proteobacterium HTCC2080|Rep: ATPase FliI/YscN - marine
gamma proteobacterium HTCC2080
Length = 477
Score = 44.8 bits (101), Expect = 0.002
Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 15/112 (13%)
Frame = +3
Query: 381 LAEHFRDEEGQDLLLFIDNIFRFTQAGSEVRTRSSYQFEGRGGRFTVKLSLRSNL----- 545
+AE++R +G ++LL +D++ RF QA E+ + RG +V SL NL
Sbjct: 250 IAEYYR-AQGLNVLLLVDSLTRFAQAQREIGLAAGEPPVSRGYTPSV-FSLMPNLIERAG 307
Query: 546 -------KAVYV---PADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVD 671
AVY DDL DP + A LD VLS +A+ G++PA+D
Sbjct: 308 NLGSGSITAVYTVLTEGDDLQDPIADSARAILDGHVVLSRKMADSGLFPAID 359
>UniRef50_Q81SH1 Cluster: Flagellum-specific ATP synthase, putative;
n=20; Bacillales|Rep: Flagellum-specific ATP synthase,
putative - Bacillus anthracis
Length = 434
Score = 44.0 bits (99), Expect = 0.003
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 15/116 (12%)
Frame = +3
Query: 378 TLAEHFRDEEGQDLLLFIDNIFRFTQA-------------GSEVRTRSSYQFE--GRGGR 512
++AE+FRD+ G ++LL +D++ RF A G + SY + R G+
Sbjct: 238 SIAEYFRDQ-GNNVLLMMDSVTRFADARRSVDIAVKELPIGGKTLLMESYMKKLLERSGK 296
Query: 513 FTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPLD 680
T K S+ + + V V DDL P P LD VL +A L YPA+ LD
Sbjct: 297 -TQKGSI-TGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVLD 350
>UniRef50_O07025 Cluster: Flagellum-specific ATP synthase; n=24;
Epsilonproteobacteria|Rep: Flagellum-specific ATP
synthase - Helicobacter pylori (Campylobacter pylori)
Length = 434
Score = 43.6 bits (98), Expect = 0.005
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Frame = +3
Query: 360 GGLDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEVR-------TRSSY---------Q 491
G +++AE+F+++ G D+L +D++ RF A E+ T Y Q
Sbjct: 230 GAFCAMSVAEYFKNQ-GLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQ 288
Query: 492 FEGRGGRFTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVD 671
R G+ K S+ + +V V DDL+DP T + LD VLS + + G+YP ++
Sbjct: 289 LMERAGKEENKGSITAFF-SVLVEGDDLSDPIADQTRSILDGHIVLSRELTDYGIYPPIN 347
Query: 672 PLD 680
L+
Sbjct: 348 ILN 350
>UniRef50_Q0C5J4 Cluster: Flagellar protein export ATPase FliI; n=1;
Hyphomonas neptunium ATCC 15444|Rep: Flagellar protein
export ATPase FliI - Hyphomonas neptunium (strain ATCC
15444)
Length = 462
Score = 42.7 bits (96), Expect = 0.008
Identities = 38/114 (33%), Positives = 51/114 (44%), Gaps = 16/114 (14%)
Frame = +3
Query: 384 AEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFEGRGGRFTVKLSLRSN-- 542
AEHFRD+ G +L D+I RF +A EV T + F R +L+ R+
Sbjct: 235 AEHFRDQ-GHSVLFLFDSITRFAEAHREVALLAGETPALNAFPPSTVRVIAELAERAGPG 293
Query: 543 ---------LKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPL 677
+ +V V DL +P LD +LS IAE G YPA+D L
Sbjct: 294 TGAKGDITGIFSVLVAGSDLEEPVADMIRGILDGHIILSRNIAERGRYPAIDVL 347
>UniRef50_P74857 Cluster: Probable secretion system apparatus ATP
synthase ssaN; n=17; Gammaproteobacteria|Rep: Probable
secretion system apparatus ATP synthase ssaN -
Salmonella typhimurium
Length = 433
Score = 41.1 bits (92), Expect = 0.024
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 14/114 (12%)
Frame = +3
Query: 378 TLAEHFRDEEGQDLLLFIDNIFRFTQAGSEVRT---RSSYQFEGRGGRFTVKLSL----- 533
T+AE FRD G+ ++L D++ R+ +A E+ ++ E G F+ L
Sbjct: 235 TIAEFFRDN-GKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALPRLLERTG 293
Query: 534 ---RSNLKAVY---VPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPL 677
+ ++ A Y V DD+ +P + LD VLS +AE G YPA+D L
Sbjct: 294 MGEKGSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAIDVL 347
>UniRef50_Q6D5F7 Cluster: Type III secretion protein; n=10;
Enterobacteriaceae|Rep: Type III secretion protein -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 456
Score = 40.3 bits (90), Expect = 0.042
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 15/114 (13%)
Frame = +3
Query: 381 LAEHFRDEEGQDLLLFIDNIFRFTQAGSEVRTRSSYQFEGRGGR----FTV--KLSLRSN 542
+AE +R EG+ +LL +D++ RF +A E+ + +GRGG +T+ +L R+
Sbjct: 257 IAEAYR-AEGRQVLLILDSLTRFARAQREIGLALG-EPQGRGGLPPSVYTLLPRLVERAG 314
Query: 543 ---------LKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPL 677
L +V + D + DP + +D VL+ +AE G YPA+D L
Sbjct: 315 QTEDGAITALYSVLIEQDSMNDPVADEVRSLIDGHIVLARRLAEQGHYPAIDVL 368
>UniRef50_Q2CGJ3 Cluster: Flagellum-specific ATP synthase; n=1;
Oceanicola granulosus HTCC2516|Rep: Flagellum-specific
ATP synthase - Oceanicola granulosus HTCC2516
Length = 438
Score = 40.3 bits (90), Expect = 0.042
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 16/115 (13%)
Frame = +3
Query: 375 VTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEVRTRSSYQFEGRGGRFTV-----KLSLRS 539
+ +AEHFRD G+ +LL +D+I RF A E+ RG TV +L R+
Sbjct: 225 MAVAEHFRD-RGKQVLLLLDSITRFATAQREIGLSGGEPPTSRGYPPTVFAELPRLLERA 283
Query: 540 N-----------LKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVD 671
L V V D+ +P + D +L IAE G YPA+D
Sbjct: 284 GPGCDGQGDITALFTVLVEGSDMEEPVADSVRGITDGHVILDRRIAERGRYPAID 338
>UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n=1;
Opitutaceae bacterium TAV2|Rep: Flagellar protein export
ATPase FliI - Opitutaceae bacterium TAV2
Length = 461
Score = 39.9 bits (89), Expect = 0.056
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Frame = +3
Query: 381 LAEHFRDEEGQDLLLFIDNIFRFTQAGSEVRTRSSYQFEGRGGRFTV-----KLSLRSN- 542
+AE +RD+ G+++LL +D++ RF A E+ RG +V +L R+
Sbjct: 256 IAESYRDQ-GKNVLLLMDSVTRFAMAQREIGLAIGEPPATRGYTPSVFALLPRLLERAGA 314
Query: 543 --------LKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPLD 680
L V V DD+ +P LD VLS A+A YPA+D L+
Sbjct: 315 GETGAITALYTVLVEGDDMNEPIADAVRGILDGHLVLSRALAHANHYPAIDVLE 368
>UniRef50_A6FKZ2 Cluster: Flagellum-specific ATP synthase; n=1;
Roseobacter sp. AzwK-3b|Rep: Flagellum-specific ATP
synthase - Roseobacter sp. AzwK-3b
Length = 474
Score = 39.9 bits (89), Expect = 0.056
Identities = 38/117 (32%), Positives = 51/117 (43%), Gaps = 16/117 (13%)
Frame = +3
Query: 375 VTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEVRTRSSYQFEGRG-----GRFTVKLSLRS 539
+ +AE+FRD G+ +LL D+I RF +A EV + RG + L R+
Sbjct: 239 MAVAEYFRDA-GKQVLLMFDSITRFAEAHREVAIAAGELPTMRGFPASTSHMIMSLCERA 297
Query: 540 N-----------LKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPL 677
L +V V DL +P LD VL IAE G YPA+D L
Sbjct: 298 GPGAQGCADITALFSVLVAGSDLDEPVADILRGVLDGHVVLDRQIAERGRYPAIDLL 354
>UniRef50_Q12T73 Cluster: ATPase FliI/YscN; n=1; Shewanella
denitrificans OS217|Rep: ATPase FliI/YscN - Shewanella
denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Length = 436
Score = 39.5 bits (88), Expect = 0.074
Identities = 25/59 (42%), Positives = 32/59 (54%)
Frame = +3
Query: 501 RGGRFTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPL 677
R G F + S+ + L +V V DD DP T A LD VL A+AE G +PA+D L
Sbjct: 293 RCGAFRHRASITA-LFSVLVETDDFDDPIVDTLRAVLDGHIVLDRALAEQGHFPAIDVL 350
>UniRef50_Q7UIJ0 Cluster: Flagellum-specific ATP synthase; n=3;
Planctomycetaceae|Rep: Flagellum-specific ATP synthase -
Rhodopirellula baltica
Length = 467
Score = 39.1 bits (87), Expect = 0.098
Identities = 38/113 (33%), Positives = 50/113 (44%), Gaps = 16/113 (14%)
Frame = +3
Query: 381 LAEHFRDEEGQDLLLFIDNIFRFTQAGSEVR-------TRSSY---------QFEGRGGR 512
+AE FRDE G +LL +D++ RF A E+ T Y Q R GR
Sbjct: 251 IAEKFRDE-GHRVLLLVDSVTRFAMAQRELGLAAGEPPTTRGYPPSVFNMLPQLVERAGR 309
Query: 513 FTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVD 671
T K S+ + V V DD +P T LD VL+ +A G YP +D
Sbjct: 310 -TTKGSITA-FYTVLVEGDDNNEPISDTVRGLLDGHIVLNRKLAHRGHYPPID 360
>UniRef50_A3WGS0 Cluster: FliI, Flagellum-specific ATPase; n=2;
Erythrobacter|Rep: FliI, Flagellum-specific ATPase -
Erythrobacter sp. NAP1
Length = 450
Score = 39.1 bits (87), Expect = 0.098
Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 16/113 (14%)
Frame = +3
Query: 381 LAEHFRDEEGQDLLLFIDNIFRFTQAGSEVRTRSSYQFEGRG----------------GR 512
+AEHFR +G+ +LL +D++ R A E+ RG G
Sbjct: 242 IAEHFR-AKGRKVLLVLDSLTRVAHAARELALVLGEPGAARGYPPSALSTITRLVERAGN 300
Query: 513 FTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVD 671
+ + +V DD +DP T A LD VLS +A+ G YPA+D
Sbjct: 301 CATSGGAVTGIYSVLADGDDTSDPVVDTARAILDGHLVLSRELAQRGHYPAID 353
>UniRef50_Q2SEY6 Cluster: Flagellum-specific ATP synthase; n=1;
Hahella chejuensis KCTC 2396|Rep: Flagellum-specific ATP
synthase - Hahella chejuensis (strain KCTC 2396)
Length = 416
Score = 38.7 bits (86), Expect = 0.13
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 16/113 (14%)
Frame = +3
Query: 381 LAEHFRDEEGQDLLLFIDNIFRFTQAGSEVR------------TRSSY----QFEGRGGR 512
+AE+F+D+ G+ ++L++D+I R A E+ T S++ + R G
Sbjct: 217 IAEYFKDK-GKHVMLYMDSITRLATAQREIGLAIGEPPTSRGYTPSTFSLLPRLTERAGI 275
Query: 513 FTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVD 671
F S+ S L V V DD +P T + LD +L +A G++PA+D
Sbjct: 276 FKSGGSI-SALYTVLVEGDDFNEPVSDTVRSILDGHIMLKRQLAHQGIFPAID 327
>UniRef50_P26465 Cluster: Flagellum-specific ATP synthase; n=258;
cellular organisms|Rep: Flagellum-specific ATP synthase
- Salmonella typhimurium
Length = 456
Score = 37.1 bits (82), Expect = 0.40
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 16/113 (14%)
Frame = +3
Query: 381 LAEHFRDEEGQDLLLFIDNIFRFTQAGSEVRTRSSYQFEGRGGRFTVKLSLRS------- 539
+AE FRD GQ +LL +D++ R+ A E+ +G +V L +
Sbjct: 256 IAEDFRDR-GQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGN 314
Query: 540 ------NLKAVYV---PADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVD 671
++ A Y DD DP + A LD VLS +AE G YPA+D
Sbjct: 315 GIHGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAID 367
>UniRef50_Q2IQ94 Cluster: Sodium-transporting two-sector ATPase;
n=3; Bacteria|Rep: Sodium-transporting two-sector ATPase
- Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 475
Score = 36.7 bits (81), Expect = 0.52
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +3
Query: 501 RGGRFTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPL 677
R GR + + L + +P DDLT P P T + VLS + GVYP +D L
Sbjct: 295 RAGRVRGRPGSLTQLPVLTMPDDDLTHPIPDLTGYITEGQIVLSRDLDRRGVYPPIDVL 353
>UniRef50_Q1GNY4 Cluster: ATPase FliI/YscN; n=6; Bacteria|Rep:
ATPase FliI/YscN - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 443
Score = 36.3 bits (80), Expect = 0.69
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 16/113 (14%)
Frame = +3
Query: 381 LAEHFRDEEGQDLLLFIDNIFRFTQAGSEVR-------TRSSYQ------FEGRGGRFTV 521
+AE FR EG+ +LL ID++ R A E+ T Y R +
Sbjct: 244 IAEAFR-AEGKKVLLLIDSLTRVAHAQREIGLTLGEPPTMKGYPPSVFALIPSLCERAGI 302
Query: 522 KLSLRSNLKAVY-VPAD--DLTDPAPATTFAHLDATTVLSPAIAELGVYPAVD 671
+ ++ A+Y V AD D+ DP + A +D +LS +AE GVYPA+D
Sbjct: 303 DKATGGSVTALYTVLADGGDIDDPVVDSARAIVDGHIILSRQLAEQGVYPAID 355
>UniRef50_A4HP93 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania braziliensis
Length = 2623
Score = 35.5 bits (78), Expect = 1.2
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +3
Query: 429 IDNIFRFTQAGSEVRTRSSYQFEGRGGRFTVKLSLRSNLKAVYVPADDLTDPAPATTFAH 608
+D + T AG + TRSS+ G G RFT +SL ++++ + P + D A
Sbjct: 436 LDPVVEATVAGKGLCTRSSHLSGGAGTRFTAVVSLLDSVRSSWTPLPGMADSDDAAALTA 495
Query: 609 L 611
L
Sbjct: 496 L 496
>UniRef50_Q9EZ19 Cluster: SpaL/InvC; n=4; Enterobacteriaceae|Rep:
SpaL/InvC - Sodalis glossinidius
Length = 437
Score = 35.1 bits (77), Expect = 1.6
Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 16/124 (12%)
Frame = +3
Query: 354 CPGGLDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEVRTRSSYQFEGRGGRFTV---- 521
C L T+AE+FRD +G+ ++LF+D++ RF +A +V + RG +V
Sbjct: 230 CNAALVATTVAEYFRD-QGRRVVLFLDSLTRFARALRDVALAAGEAPARRGYPASVFDAL 288
Query: 522 -------KLSLRSNLKAVY---VPADDLTDP-AP-ATTFAHLDATTVLSPAIAELGVYPA 665
SL ++ A Y + DD DP AP D LS ++ YPA
Sbjct: 289 PRVLERPGNSLSGSITAFYTVLLEGDDEPDPDAPDENPLRFSDGHIYLSRKLSAASHYPA 348
Query: 666 VDPL 677
+D L
Sbjct: 349 IDIL 352
>UniRef50_A5FHZ4 Cluster: Putative uncharacterized protein
precursor; n=1; Flavobacterium johnsoniae UW101|Rep:
Putative uncharacterized protein precursor -
Flavobacterium johnsoniae UW101
Length = 356
Score = 35.1 bits (77), Expect = 1.6
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Frame = +3
Query: 564 ADDLTDPAPATTFAHLDATTVLSPA--IAELGVYP 662
++++T P P TTF+ +TT+ PA +AEL VYP
Sbjct: 254 SENVTPPTPGTTFSWTPSTTLSKPAFNLAELAVYP 288
>UniRef50_P55717 Cluster: Probable ATP synthase y4yI; n=27;
Bacteria|Rep: Probable ATP synthase y4yI - Rhizobium sp.
(strain NGR234)
Length = 451
Score = 35.1 bits (77), Expect = 1.6
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Frame = +3
Query: 381 LAEHFRDEEGQDLLLFIDNIFRFTQAGSEVRTRSSYQFEGRGGRFTVKLSL--------- 533
LAE+FR E+G + L +D++ RF +A E+ + RG +V +L
Sbjct: 255 LAEYFR-EQGLRVALLLDSLTRFCRAMREIGLAAGEPPTRRGFPPSVFAALPGLLERAGL 313
Query: 534 --RSNLKAVY---VPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPL 677
R ++ A Y V D DP + LD VLS A+A +PA+D L
Sbjct: 314 GERGSITAFYTVLVEGDGTGDPIAEESRGILDGHIVLSRALAARSHFPAIDVL 366
>UniRef50_UPI0000EB4335 Cluster: UPI0000EB4335 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB4335 UniRef100
entry - Canis familiaris
Length = 377
Score = 34.7 bits (76), Expect = 2.1
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -3
Query: 376 TRSRPPGHAPRGAHPSGRIPGTP--GSPARTPAKITS 272
TR PP HAPRG+ P PG P GS R P + S
Sbjct: 269 TRQPPPVHAPRGSLPRAPSPGLPPQGSLPRAPPRAPS 305
>UniRef50_Q63K04 Cluster: Kumamolisin; n=33; Burkholderia|Rep:
Kumamolisin - Burkholderia pseudomallei (Pseudomonas
pseudomallei)
Length = 529
Score = 34.7 bits (76), Expect = 2.1
Identities = 47/160 (29%), Positives = 67/160 (41%), Gaps = 20/160 (12%)
Frame = +3
Query: 252 RNNQEFLEVIFAGVRAGDPGVPGIRPEG*APR-GACPGGLDRVTLAEHFRDEEG------ 410
R ++ L+ + G+ +GDPGV + E A R GA P D V E F + G
Sbjct: 37 RQQEQHLDSLLQGLASGDPGVKPVSREAFAQRFGAHP---DDVMKVEAFAQQRGLAVARV 93
Query: 411 ---QDLLLFIDNIFRFTQA-GSEVRT---RSSYQFEGRGGRFTVKLSLRSNLKAVYVPAD 569
+ L++ I +F A G ++ RS Q+ GR G T+ L + AV + D
Sbjct: 94 DPVESLVVLSGTIAQFEAAFGVKLERFEHRSIGQYRGRTGDITLPDELHGIVTAV-LGLD 152
Query: 570 DLTDPAP----ATTF--AHLDATTVLSPAIAELGVYPAVD 671
D P TF A A T P +A L +P D
Sbjct: 153 DRPQARPHFRLRPTFLPARAPAVTYTPPQLAALYDFPPGD 192
>UniRef50_Q3J9F4 Cluster: Sodium-transporting two-sector ATPase;
n=5; cellular organisms|Rep: Sodium-transporting
two-sector ATPase - Nitrosococcus oceani (strain ATCC
19707 / NCIMB 11848)
Length = 479
Score = 34.3 bits (75), Expect = 2.8
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +3
Query: 501 RGGRFTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVD 671
R GR + + + V +P+DD+T P P T + VLS + G+YP V+
Sbjct: 288 RAGRIKNRRGSITMVPVVSMPSDDITHPIPDLTGYITEGQIVLSRELHHQGIYPPVN 344
>UniRef50_UPI0000F341A8 Cluster: UPI0000F341A8 related cluster; n=1;
Bos taurus|Rep: UPI0000F341A8 UniRef100 entry - Bos
Taurus
Length = 445
Score = 33.9 bits (74), Expect = 3.7
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -3
Query: 376 TRSRPPGHAPRGAHPSGRIPGTPGSPARTPAK 281
+R R G APR HPS + PG + ARTP++
Sbjct: 197 SRMRMGGRAPRPPHPSAQPPGPARTHARTPSR 228
>UniRef50_Q1CVR3 Cluster: Putative uncharacterized protein; n=1;
Myxococcus xanthus DK 1622|Rep: Putative uncharacterized
protein - Myxococcus xanthus (strain DK 1622)
Length = 335
Score = 33.9 bits (74), Expect = 3.7
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -1
Query: 417 SPGPPRLGSAQPRSPGQGHPGTRPVGL 337
+P PR G A PRSP HPG +P L
Sbjct: 171 APRRPRRGPAHPRSPAGAHPGRQPPAL 197
>UniRef50_A1SEP6 Cluster: ATPase, FliI/YscN family; n=10;
Bacteria|Rep: ATPase, FliI/YscN family - Nocardioides
sp. (strain BAA-499 / JS614)
Length = 435
Score = 33.9 bits (74), Expect = 3.7
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +3
Query: 537 SNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPLD 680
+ L V V DDL DP + + LD VLS +A G +P++D L+
Sbjct: 303 TGLYTVLVEGDDLQDPIGDSARSILDGHVVLSRDLATSGHFPSIDVLE 350
>UniRef50_Q67G29 Cluster: Cyclase; n=1; Streptomyces
griseoruber|Rep: Cyclase - Streptomyces griseoruber
Length = 321
Score = 33.5 bits (73), Expect = 4.9
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3
Query: 361 PGHAPRGAHPSGRIPGTPGSPARTPAK 281
PGHA R R+ G PG+PAR+PA+
Sbjct: 249 PGHAVRPDGLGARLSGGPGAPARSPAR 275
>UniRef50_O88737 Cluster: Protein bassoon; n=13; Euteleostomi|Rep:
Protein bassoon - Mus musculus (Mouse)
Length = 3942
Score = 33.5 bits (73), Expect = 4.9
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -3
Query: 361 PGHAPRGAHPSGRIPGTPGSPARTP 287
PG P GA P R GTPG+PA P
Sbjct: 3880 PGPGPAGAKPGARPGGTPGAPAGQP 3904
>UniRef50_A7HIT8 Cluster: Putative uncharacterized protein; n=2;
Anaeromyxobacter|Rep: Putative uncharacterized protein -
Anaeromyxobacter sp. Fw109-5
Length = 597
Score = 33.1 bits (72), Expect = 6.4
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +2
Query: 269 PRSNLRR---STSWRPGRPWYTARRMSPTGRVPGWP 367
PR + RR +++ R GRP ARR +P+GR PG P
Sbjct: 11 PRGDQRRRLSASARRSGRPVGVARRRAPSGRSPGMP 46
>UniRef50_UPI0000E48CBD Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 2606
Score = 32.7 bits (71), Expect = 8.5
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = +3
Query: 432 DNIFRFTQAGSE---VRTRSSYQFEGRGGRFTVKLSLRSNLKAVYVPADDL 575
DNI ++T +G+ R SY+F+ RG FTV + S++ +V++ + L
Sbjct: 197 DNINQYTNSGTNSCMTANRVSYEFDFRGPSFTVDTACSSSMYSVHLACEAL 247
>UniRef50_Q02CE4 Cluster: Tannase and feruloyl esterase precursor;
n=1; Solibacter usitatus Ellin6076|Rep: Tannase and
feruloyl esterase precursor - Solibacter usitatus
(strain Ellin6076)
Length = 629
Score = 32.7 bits (71), Expect = 8.5
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 306 PGVPGIRPEG*APRGACPGG 365
PG+PG P+G AP GA PGG
Sbjct: 177 PGIPGRGPQGAAPAGAGPGG 196
>UniRef50_A7RXQ2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 937
Score = 32.7 bits (71), Expect = 8.5
Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -3
Query: 364 PPGHAPRG-AHPSGRIPGTPGSPARTP 287
PPGH P G HP G + G P P R P
Sbjct: 39 PPGHGPPGRGHPPGFMGGPPRGPPRQP 65
>UniRef50_Q7VQZ9 Cluster: Tryptophan synthase alpha chain; n=2;
Candidatus Blochmannia|Rep: Tryptophan synthase alpha
chain - Blochmannia floridanus
Length = 271
Score = 32.7 bits (71), Expect = 8.5
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 516 TVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIA-ELGVYPAVDPL 677
T+ SL N +VP + DP P TTF H+ T + S A A ELG+ P DP+
Sbjct: 6 TMFKSLNQNKLGAFVPFITIGDPDP-TTFIHIIDTLIQSGADALELGI-PFSDPV 58
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 532,285,037
Number of Sequences: 1657284
Number of extensions: 9625442
Number of successful extensions: 39753
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 34969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39648
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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