Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10c23
         (364 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   1.3  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   3.9  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    20   9.0  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    20   9.0  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -1

Query: 283 SWSQTYIATFSVVLAIVLKYGTSLSKFLWS 194
           +W  TY      +L  V+KYG +L  +L S
Sbjct: 99  AWDITYRFYGGFLLCKVVKYGQTLGPYLSS 128


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +1

Query: 235 LWQVLQKMSQYMSGTNF 285
           +W +  K +Q+ S +NF
Sbjct: 57  IWSIFNKWNQFRSYSNF 73


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 8/30 (26%), Positives = 13/30 (43%)
 Frame = -1

Query: 223 GTSLSKFLWSSGSRXAVFMYFLRSVIFITI 134
           G   + F W S +    +  F    IF+T+
Sbjct: 72  GKGRTTFRWLSSTSIYAYFIFGAETIFVTM 101


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 8/30 (26%), Positives = 13/30 (43%)
 Frame = -1

Query: 223 GTSLSKFLWSSGSRXAVFMYFLRSVIFITI 134
           G   + F W S +    +  F    IF+T+
Sbjct: 72  GKGRTTFRWLSSTSIYAYFIFGAETIFVTM 101


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,711
Number of Sequences: 336
Number of extensions: 1700
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7404950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)