Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10c22
(736 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0099 - 25816029-25816337,25816825-25817027,25817108-258171... 102 3e-22
03_05_0921 + 28824706-28824882,28825049-28825097,28826696-28827156 98 7e-21
08_02_0518 + 18091601-18091750,18093501-18093549,18094734-180949... 92 4e-19
10_01_0096 - 1168986-1169243,1169523-1169722,1170453-1170501,117... 90 2e-18
10_08_0556 - 18739091-18739399,18740126-18740325,18740453-187405... 89 3e-18
08_01_0012 - 89798-90514 89 3e-18
04_04_0618 - 26647966-26648274,26648370-26648572,26648677-266487... 84 1e-16
01_06_1700 + 39282713-39282833,39283184-39283305,39283650-392838... 32 0.54
01_01_1224 - 9888726-9888820,9889042-9889085,9889194-9889282,988... 32 0.54
05_03_0227 + 10655204-10655269,10656333-10656393,10656570-106566... 31 1.3
12_02_1227 - 27186713-27186763,27187132-27187222,27187243-271872... 30 1.7
08_01_0156 - 1233431-1233925 30 2.2
06_03_0258 - 18847954-18848670 30 2.2
04_01_0567 - 7263744-7263922,7264020-7264259,7264919-7264982,726... 30 2.2
04_03_0636 + 18223229-18223489,18223975-18224519,18225018-182251... 29 2.9
03_05_0534 + 25343973-25344267,25344510-25344979 29 2.9
07_01_0215 - 1607473-1609494 29 3.8
11_04_0094 + 13418604-13418680,13419331-13419400,13420078-134202... 29 5.1
10_08_0762 - 20410681-20411834,20411999-20412098,20412200-204122... 29 5.1
07_03_0554 - 19401092-19402540 29 5.1
06_03_1283 - 28957729-28959258,28959354-28959550,28959824-289600... 29 5.1
06_01_0981 + 7613381-7614086,7614203-7614282,7614883-7614960,761... 29 5.1
03_06_0744 + 35910512-35910569,35911145-35911325,35912332-359124... 29 5.1
02_04_0585 - 24088344-24089366,24089833-24090075,24090305-240906... 29 5.1
11_03_0122 - 10313934-10314069,10315889-10316319 28 6.7
06_01_0495 - 3546131-3547588 28 6.7
02_05_0399 + 28658667-28658922,28659287-28659443,28659527-286597... 28 6.7
02_04_0651 - 24737953-24738114,24738205-24738375,24738534-247386... 28 6.7
07_03_0555 - 19408998-19410455 28 8.8
06_03_1306 + 29208882-29209547,29209641-29209854,29209947-292100... 28 8.8
06_02_0037 - 10856616-10856915,10857527-10860238 28 8.8
>02_05_0099 -
25816029-25816337,25816825-25817027,25817108-25817156,
25818274-25818417
Length = 234
Score = 102 bits (245), Expect = 3e-22
Identities = 41/128 (32%), Positives = 73/128 (57%)
Frame = +3
Query: 288 LATVLLIGVSALTIFWVFYYRGGYAWADDTPDKQFNLHPTLMVAGFVTFCGFSVLLYRIC 467
+A L + + + + W ++RGG A+ + FN+HP LM+ G++ ++++Y++
Sbjct: 13 VAHALAVAAATMVLVWCIHFRGGLAFEATNKNLIFNVHPVLMLIGYIILGSEAIMVYKVL 72
Query: 468 RCFRRIYVKLLHAIFHALAFPCIVIGFLAVLDYHNKKGINNFYSLHSWIGFVAMGLFGLQ 647
++ KL+H I HA+A +G +HN+ GI N YSLHSW+G + L+G+Q
Sbjct: 73 PTWKHDTTKLIHLILHAIALVFGAVGIYCAFKFHNESGIANLYSLHSWLGIGTICLYGIQ 132
Query: 648 YAVGFFSF 671
+ GF +F
Sbjct: 133 WIFGFVAF 140
>03_05_0921 + 28824706-28824882,28825049-28825097,28826696-28827156
Length = 228
Score = 97.9 bits (233), Expect = 7e-21
Identities = 47/135 (34%), Positives = 73/135 (54%)
Frame = +3
Query: 273 ALVITLATVLLIGVSALTIFWVFYYRGGYAWADDTPDKQFNLHPTLMVAGFVTFCGFSVL 452
A V A VL + + L + W+ ++RGG D P++ FN+HP +M GF+ G ++L
Sbjct: 19 ARVAAAAHVLFLTTAVLMLVWLLHFRGGINIQSDDPEQIFNVHPFVMCWGFILLIGEAIL 78
Query: 453 LYRICRCFRRIYVKLLHAIFHALAFPCIVIGFLAVLDYHNKKGINNFYSLHSWIGFVAMG 632
Y R K++H + H +A + G A +H+ + SLHSW+G +A+
Sbjct: 79 AYTTIPMDHRTQ-KMVHMLVHLVALILAIFGVYAAFKFHDAAVAPDLVSLHSWLGILAVA 137
Query: 633 LFGLQYAVGFFSFLL 677
LFGLQ+ GFF+F L
Sbjct: 138 LFGLQWLFGFFAFWL 152
>08_02_0518 +
18091601-18091750,18093501-18093549,18094734-18094933,
18095030-18095335
Length = 234
Score = 92.3 bits (219), Expect = 4e-19
Identities = 52/154 (33%), Positives = 85/154 (55%), Gaps = 2/154 (1%)
Frame = +3
Query: 279 VITLATVLLIGVSALTIFWVFYYRGGYAWADDTPDKQ--FNLHPTLMVAGFVTFCGFSVL 452
V + +L + +A + W ++RGG A + +T DK FN+HP LM+ G V G ++L
Sbjct: 11 VFGIVRLLGLAAAAAIVVWAVHFRGGMALSSET-DKLLIFNVHPVLMLIGLVVLNGEAIL 69
Query: 453 LYRICRCFRRIYVKLLHAIFHALAFPCIVIGFLAVLDYHNKKGINNFYSLHSWIGFVAMG 632
Y+ +++ KL+H LA +IG V +H+++ I++ Y+LHSW+G +
Sbjct: 70 AYKTVPGTKKLK-KLVHLALQFLAMLLSLIGLWTVWKFHDERQIDHLYTLHSWLGLSCII 128
Query: 633 LFGLQYAVGFFSFLLLLICNKGTAGFRASLVPIH 734
F LQ+A GF++F G+ RASL+P H
Sbjct: 129 FFSLQWATGFYTFWY----PGGSRSGRASLLPWH 158
>10_01_0096 -
1168986-1169243,1169523-1169722,1170453-1170501,
1170627-1170797
Length = 225
Score = 89.8 bits (213), Expect = 2e-18
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 3/135 (2%)
Frame = +3
Query: 279 VITLATVLLIGVSALTIFWVFYYRGGYAWA---DDTPDKQFNLHPTLMVAGFVTFCGFSV 449
V+ +A +L V LT+ WV ++RGG +W+ TP + HP MV G V G ++
Sbjct: 16 VVVVAQLLAAAVLTLTLVWVLHFRGGVSWSWHRSSTPQLVYTAHPLFMVIGLVICTGEAI 75
Query: 450 LLYRICRCFRRIYVKLLHAIFHALAFPCIVIGFLAVLDYHNKKGINNFYSLHSWIGFVAM 629
+ YRI R + K +H + H +A +G A +H+ + SLH+W+G
Sbjct: 76 MAYRIMLGSREVK-KAVHLLLHLVALAFAAVGLYAAFKFHHDLRAPDIRSLHAWLGITTA 134
Query: 630 GLFGLQYAVGFFSFL 674
L+ Q+ VGF F+
Sbjct: 135 ALYAFQWLVGFVYFV 149
>10_08_0556 -
18739091-18739399,18740126-18740325,18740453-18740501,
18741151-18741285
Length = 230
Score = 89.0 bits (211), Expect = 3e-18
Identities = 43/128 (33%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
Frame = +3
Query: 291 ATVLLIGVSALTIFWVFYYRGGYAWADDTPDKQ-FNLHPTLMVAGFVTFCGFSVLLYRIC 467
A L + + + W ++RGG A + T FN+HP LM+ GF+ +++ Y+I
Sbjct: 10 AHALAAAAAGMVLLWCVHFRGGLALSSPTNKGLIFNVHPVLMLIGFIILGSEAIMGYKIW 69
Query: 468 RCFRRIYVKLLHAIFHALAFPCIVIGFLAVLDYHNKKGINNFYSLHSWIGFVAMGLFGLQ 647
+ K++H + HA+A +G A +HN+ GI N YSLHSW+G + L+G+Q
Sbjct: 70 P-WGHDTNKMVHLLLHAIALLLGSVGIYAAFKFHNESGIANLYSLHSWVGLGTICLYGVQ 128
Query: 648 YAVGFFSF 671
+ GF +F
Sbjct: 129 WIFGFVTF 136
>08_01_0012 - 89798-90514
Length = 238
Score = 89.0 bits (211), Expect = 3e-18
Identities = 45/133 (33%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Frame = +3
Query: 279 VITLATVLLIGVSALTIFWVFYYRGGYAWADDTPDKQFNLHPTLMVAGFVTFCGFSVLLY 458
++ +A VL + +A+ + W ++RGG A FN HP LMV G V ++L Y
Sbjct: 17 MVVVAHVLAVAATAMVLVWCVHFRGGLALRSHNKQLIFNTHPVLMVLGLVVLAAEAILSY 76
Query: 459 RICRCF--RRIYVKLLHAIFHALAFPCIVIGFLAVLDYHNKKGINNFYSLHSWIGFVAMG 632
R R K +H HA+ +G AV YH + I N YSLHSWIG +
Sbjct: 77 RSLSIIVSSRDARKKVHLGLHAVGLALGGVGIYAVFKYHAEADIPNLYSLHSWIGIATIS 136
Query: 633 LFGLQYAVGFFSF 671
L+ L + + F +F
Sbjct: 137 LYALHWLLAFLTF 149
>04_04_0618 -
26647966-26648274,26648370-26648572,26648677-26648725,
26649167-26649256,26649767-26649916
Length = 266
Score = 84.2 bits (199), Expect = 1e-16
Identities = 34/96 (35%), Positives = 55/96 (57%)
Frame = +3
Query: 384 KQFNLHPTLMVAGFVTFCGFSVLLYRICRCFRRIYVKLLHAIFHALAFPCIVIGFLAVLD 563
K + +HP LM+ G++ ++++Y+I KL+H I HA+A +G
Sbjct: 77 KLYQVHPVLMLIGYIILGSEAIMIYKIFPKLNHDTTKLIHLILHAIAIVLGAVGIYCAFK 136
Query: 564 YHNKKGINNFYSLHSWIGFVAMGLFGLQYAVGFFSF 671
+HN+ GI N YSLHSW+G + L+G+Q+ GF +F
Sbjct: 137 FHNESGIANLYSLHSWLGIGTISLYGIQWIFGFVAF 172
>01_06_1700 +
39282713-39282833,39283184-39283305,39283650-39283813,
39284762-39284780,39284927-39285106,39285355-39285432,
39285578-39285658,39286010-39286102,39286321-39286401,
39286499-39286661,39286778-39286898,39287183-39287255,
39287528-39287635,39287922-39288019,39288106-39288151,
39288514-39288610,39288940-39289013,39289092-39289196,
39289284-39289364,39289446-39289556
Length = 671
Score = 31.9 bits (69), Expect = 0.54
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -1
Query: 139 KNNTKLTQYKNTKFEKLKFEIKNLAASCHMSMFLARFVLLLSE 11
+N KLTQ K T+ EKLK I +L+ S+ + LLL+E
Sbjct: 148 RNGAKLTQSKKTEMEKLKSHIDDLSLKYIQSLNDSTKFLLLNE 190
>01_01_1224 -
9888726-9888820,9889042-9889085,9889194-9889282,
9889390-9889434,9889849-9889956,9890042-9890127,
9890324-9890411,9890669-9890872,9891251-9891326,
9891429-9891478,9891753-9891815,9891942-9891995,
9892079-9892181,9892266-9892368,9892563-9892623,
9892746-9892786,9893183-9893348
Length = 491
Score = 31.9 bits (69), Expect = 0.54
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +3
Query: 528 PCIVIGFLAVLDYHNKKGINNFYSLHSWIGFVAMGLFGLQYAV-GFFSFLLLLICNKGTA 704
PCIVI L+V+ ++ G++ Y W+ V GL GL + G +C K
Sbjct: 115 PCIVISILSVIVFNTLFGLSTTY----WMAIVTRGLLGLLCGILGPIKAYASEVCRKEHQ 170
Query: 705 GFRASLV 725
SLV
Sbjct: 171 ALGISLV 177
>05_03_0227 +
10655204-10655269,10656333-10656393,10656570-10656672,
10656768-10656870,10656951-10657004,10657124-10657186,
10657884-10658105,10658249-10658336,10658561-10658646,
10659003-10659110,10659201-10659245,10659511-10659601,
10659662-10659765
Length = 397
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +3
Query: 528 PCIVIGFLAVLDYHNKKGINNFYSLHSWIGFVAMGLFGLQYAV-GFFSFLLLLICNKGTA 704
PCIVI L+V+ ++ G++ Y W+ V G+ G+ + G IC K
Sbjct: 68 PCIVISILSVIFFNTLFGLSTRY----WMAIVTRGMLGMLCGILGPIKAYATEICRKEHQ 123
Query: 705 GFRASLV 725
SLV
Sbjct: 124 ALGMSLV 130
>12_02_1227 -
27186713-27186763,27187132-27187222,27187243-27187287,
27188021-27188436
Length = 200
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +3
Query: 459 RICRCFRRIYVKLLHA--IFHALAFPCIVIGFLAVLDYHNKKGINNFYSLHSWIGFVAMG 632
R C ++ KLL IF+ + FP +I F+ V H++ + F + W FV G
Sbjct: 139 RWCVVYKYTAAKLLKRLNIFYFVIFPNEMIVFIEVFGCHSQSATSKFLTACIWDEFVTRG 198
Query: 633 L 635
+
Sbjct: 199 M 199
>08_01_0156 - 1233431-1233925
Length = 164
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 378 GCRRPRHSPRGNRTPRRWSERRR 310
G RRP +PR RRW RRR
Sbjct: 56 GRRRPEEAPRSGGARRRWGPRRR 78
>06_03_0258 - 18847954-18848670
Length = 238
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 240 HERGACEWCEYALVITLATVLLIGVSALTI 329
H+R C C LV+T+AT+ L+GV+ L +
Sbjct: 45 HQRRRC--CVVCLVVTIATLALLGVAVLVL 72
>04_01_0567 - 7263744-7263922,7264020-7264259,7264919-7264982,
7265088-7265393,7265652-7265866,7266195-7266489,
7266596-7266655,7267091-7267717,7268510-7268596,
7269292-7269612,7270051-7270224,7272806-7275022
Length = 1594
Score = 29.9 bits (64), Expect = 2.2
Identities = 30/147 (20%), Positives = 51/147 (34%), Gaps = 2/147 (1%)
Frame = +3
Query: 216 SRSYDSDDHERGACEWCEYALVITLATVL--LIGVSALTIFWVFYYRGGYAWADDTPDKQ 389
S+ ++ E G W Y L +T A ++G+ A I W W
Sbjct: 1015 SKIIREEERESGQVSWRVYKLYMTEAWGWWGVVGMLAFAIVWQVTEMASDYWLSYETSGS 1074
Query: 390 FNLHPTLMVAGFVTFCGFSVLLYRICRCFRRIYVKLLHAIFHALAFPCIVIGFLAVLDYH 569
+P+L + +V S++L I I IF F I+ ++ D
Sbjct: 1075 IPFNPSLFIGVYVAIAAVSIILQVIKSLLETILGLQTAQIFFKKMFDSILHAPMSFFDTT 1134
Query: 570 NKKGINNFYSLHSWIGFVAMGLFGLQY 650
I + + S I + + L + Y
Sbjct: 1135 PSGRILSRVAWPSVIAVIPLVLLNIWY 1161
>04_03_0636 +
18223229-18223489,18223975-18224519,18225018-18225104,
18225187-18225243,18225391-18225629,18225809-18225942,
18226175-18226261,18226382-18226438
Length = 488
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 228 DSDDHERGACEWCEYALVITLATVLLIGVSALTIFWVFYYRGG 356
DS RG C W + ++ L L+G+ A F Y+ GG
Sbjct: 399 DSSGVARG-CGWQKIGAIVNLGAYYLVGIPAALCFAFVYHLGG 440
>03_05_0534 + 25343973-25344267,25344510-25344979
Length = 254
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -3
Query: 548 EADNDARER*R-VEDGVQQFDIDAPEASTDAVQEH 447
EA + +ER R DGV +DAP++S DA +EH
Sbjct: 22 EAAEEEQERRRPARDGVH--GVDAPQSSVDATEEH 54
>07_01_0215 - 1607473-1609494
Length = 673
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -2
Query: 210 GFDSFLLPCFFLFKSSQININTSQKITQN*HSI 112
GFDS++LPC L SS ++I TS ++ + S+
Sbjct: 643 GFDSYVLPCLSL--SSVVSIETSPEVDDDTASV 673
>11_04_0094 +
13418604-13418680,13419331-13419400,13420078-13420236,
13420334-13420445,13420530-13420649,13422249-13422406,
13422987-13423217,13424621-13424713,13425088-13425227,
13426331-13426401,13427554-13427637,13427752-13427846
Length = 469
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 510 FHALAFPCIVIGFLAVLDYHNKKGINNFYSLHSWIGFVAMGLF 638
F + FP +++ F D +K+G+ N Y L +G+ A+GLF
Sbjct: 372 FGDIIFPGLLVAFSYRFDRASKRGLFNGYFLWLTVGY-AVGLF 413
>10_08_0762 - 20410681-20411834,20411999-20412098,20412200-20412298,
20412563-20414133,20415080-20415128
Length = 990
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 464 LSMLPAHLCQTAARHLPRVSVPVHRY 541
LS + +H+C ++ P +S VHRY
Sbjct: 945 LSTMDSHICTAGSQETPLISSSVHRY 970
>07_03_0554 - 19401092-19402540
Length = 482
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 354 GYAWADDTPDKQFNLHPTLMVAGFVTFCGFSVLL 455
G W P K+ H V GFVT CG++ +L
Sbjct: 342 GLVWPTRAPQKEILAHAA--VGGFVTHCGWNSIL 373
>06_03_1283 -
28957729-28959258,28959354-28959550,28959824-28960026,
28960097-28960424,28960524-28960661,28960765-28961020,
28961529-28961626,28963104-28963367,28964395-28964584
Length = 1067
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/69 (21%), Positives = 27/69 (39%)
Frame = -3
Query: 485 DAPEASTDAVQEHGETAECNETGHHKSRVQVELLVRGVVGPGIAPAVIEHPEDGQSGDAN 306
D+ +A A HG +C + HH S + V G +++ E + +A
Sbjct: 700 DSRKAKKCAASHHGSPKKCCSSSHHGSHAKKNHGVSHHCSDGPCKSMVSCKESSVAKNAC 759
Query: 305 EQHRRQSDH 279
H + +H
Sbjct: 760 HDHHHEHNH 768
>06_01_0981 +
7613381-7614086,7614203-7614282,7614883-7614960,
7615166-7615261,7615370-7615441,7615676-7615729,
7615819-7615884,7616291-7616335
Length = 398
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 254 LRVVRVCPRDHFGDGAAHWR 313
L VV VC +H+G G A WR
Sbjct: 225 LPVVLVCENNHYGMGTAEWR 244
>03_06_0744 +
35910512-35910569,35911145-35911325,35912332-35912419,
35912541-35912726,35913591-35913725,35913803-35913862,
35914609-35914698,35915384-35915515,35916039-35916183,
35916266-35916439,35916629-35916692,35916778-35916847,
35917328-35917445,35918258-35918280,35918398-35918499,
35919831-35920250,35920327-35920563
Length = 760
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +2
Query: 410 YGGRFRYILRFLRALVPHLSMLPAHLCQTAARHLPRVSVPVHRYR 544
YGG+ Y+ HL M P C T + + +S +H+Y+
Sbjct: 67 YGGKRVYLTGSFTRWTEHLPMSPVEGCPTVFQAICSLSPGIHQYK 111
>02_04_0585 -
24088344-24089366,24089833-24090075,24090305-24090655,
24090736-24090823,24091178-24091275,24091813-24092025,
24092150-24092245,24093124-24093195,24093909-24094067
Length = 780
Score = 28.7 bits (61), Expect = 5.1
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Frame = -3
Query: 545 ADNDARE-R*RVEDGVQQFDIDAPEASTDAVQEHGET---AECNETGHHKSRVQVELLVR 378
A+ D R+ R R+E VQ I E S D +E E+ + + +++ ++ + +
Sbjct: 119 AETDNRDWRSRIEQPVQTPAIGGEEKSWDKFREAKESYISSGKQDQFNNQDKLSSQFSAK 178
Query: 377 GVVGPGIAPAVIEHPEDGQSGDANEQHRRQSDHEGILAPL 258
VGP A E P Q G+ + + R +GIL L
Sbjct: 179 AQVGPAPALVKAEVPWSIQRGNLSNKERVLKTVKGILNKL 218
>11_03_0122 - 10313934-10314069,10315889-10316319
Length = 188
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/82 (25%), Positives = 39/82 (47%)
Frame = -3
Query: 479 PEASTDAVQEHGETAECNETGHHKSRVQVELLVRGVVGPGIAPAVIEHPEDGQSGDANEQ 300
P + D+ + E AE E G ++ V+ PG AP +EH + G + ++
Sbjct: 22 PASFVDSDVDDEEEAEDEEEGKEEA---VDKTGEKPFSPGHAPG-LEHVKAGAASSSSPL 77
Query: 299 HRRQSDHEGILAPLAGTSLVVV 234
+++ + LA +AG +L+ V
Sbjct: 78 RQKEQEGAKALAAIAGIALLNV 99
>06_01_0495 - 3546131-3547588
Length = 485
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +2
Query: 419 RFRYILRFLRALV--PHLSMLPAHLCQTAARHLP 514
RFR + + R++V PH L H TAARH P
Sbjct: 59 RFRSVCKSWRSMVAEPHFVRLQLHHSTTAARHHP 92
>02_05_0399 +
28658667-28658922,28659287-28659443,28659527-28659746,
28660549-28660602,28660671-28660750,28661269-28661351,
28661385-28661546,28661667-28662071,28662151-28662503,
28662590-28662835,28663158-28663481,28664110-28664154
Length = 794
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 174 IKKNMARGKNQNQRSRSYDSDDHERGACEWC 266
+KK MAR +Q S +D DHE +C
Sbjct: 513 VKKQMARRDGASQHSNFFDCTDHEAEYYPYC 543
>02_04_0651 -
24737953-24738114,24738205-24738375,24738534-24738632,
24738738-24738938,24739234-24739341,24739531-24739810,
24739962-24740089
Length = 382
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 537 VIGFLAVLDYHNKKGINNFYSLHSWIGFVAMGLFGLQYAVGFFS 668
++G++A +D+ N G NF + WI + L L Y F S
Sbjct: 3 IVGYIAYIDFMNNMGHCNFELVPEWIFQIFPPLKYLIYTPSFHS 46
>07_03_0555 - 19408998-19410455
Length = 485
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 354 GYAWADDTPDKQFNLHPTLMVAGFVTFCGFSVLL 455
G W P K H V GFVT CG++ +L
Sbjct: 341 GLVWPTRAPQKDILAHAA--VGGFVTHCGWNSIL 372
>06_03_1306 + 29208882-29209547,29209641-29209854,29209947-29210023,
29210132-29210171,29210254-29210323,29210419-29210488,
29210747-29210995,29212810-29214700,29215458-29215771
Length = 1196
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 515 RVSVPVHRYRLPGCPRLPQQEGHQQLLFAPQLDWLRRHGT 634
+V++ + RYR P QQ + PQ+ W HGT
Sbjct: 1063 KVAIQMDRYRRKSAP-FDSDSAIQQTMEIPQVRWWSAHGT 1101
>06_02_0037 - 10856616-10856915,10857527-10860238
Length = 1003
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +3
Query: 501 HAIFHALAFPCIVIGFLA---VLDYHNKKGINNFYSLHSWIGFVAMGLFGLQYAVG 659
HAI + + F C F+A V+ K + N Y+LH+ I MGL G YA G
Sbjct: 475 HAIRYKVFFYCNSAAFVASIIVVIILQSKDLVNRYALHAAIILDLMGLMG-AYAAG 529
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,033,683
Number of Sequences: 37544
Number of extensions: 416617
Number of successful extensions: 1403
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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