Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10c22
(736 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z27080-2|CAA81603.1| 266|Caenorhabditis elegans Hypothetical pr... 98 7e-21
AF016424-3|AAB65330.1| 251|Caenorhabditis elegans Hypothetical ... 79 2e-15
AF016424-4|AAT68893.1| 152|Caenorhabditis elegans Hypothetical ... 62 3e-10
AF016424-5|AAB65326.1| 282|Caenorhabditis elegans Hypothetical ... 46 2e-05
Z81593-3|CAB04741.1| 332|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z81454-2|CAB03804.2| 346|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81495-11|CAN99657.1| 339|Caenorhabditis elegans Hypothetical p... 29 4.5
Z81495-10|CAD57692.1| 480|Caenorhabditis elegans Hypothetical p... 29 4.5
Z81495-9|CAB04064.1| 389|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z68760-12|CAD27623.1| 436|Caenorhabditis elegans Hypothetical p... 29 4.5
Z68760-11|CAA92997.2| 438|Caenorhabditis elegans Hypothetical p... 29 4.5
X68070-1|CAA48207.1| 438|Caenorhabditis elegans Lin-3 protein. 29 4.5
AL032644-11|CAN99705.1| 339|Caenorhabditis elegans Hypothetical... 29 4.5
AL032644-10|CAD57710.1| 480|Caenorhabditis elegans Hypothetical... 29 4.5
AL032644-9|CAA21673.1| 389|Caenorhabditis elegans Hypothetical ... 29 4.5
AL032641-6|CAD27613.1| 436|Caenorhabditis elegans Hypothetical ... 29 4.5
AL032641-5|CAA21649.2| 438|Caenorhabditis elegans Hypothetical ... 29 4.5
U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family... 28 7.9
U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family... 28 7.9
AL117205-7|CAB55160.1| 293|Caenorhabditis elegans Hypothetical ... 28 7.9
AF038615-5|AAB94142.1| 934|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z27080-2|CAA81603.1| 266|Caenorhabditis elegans Hypothetical
protein F55H2.5 protein.
Length = 266
Score = 97.9 bits (233), Expect = 7e-21
Identities = 51/140 (36%), Positives = 78/140 (55%), Gaps = 9/140 (6%)
Frame = +3
Query: 279 VITLATVLLIGVSALTI-FWVFYYRGGYAWADDTPDKQFNLHPTLMVAGFVTFCGFSVLL 455
+I + + + G++ L + W+ + G+AW +D PDK+FN HPT M+ G V G ++L+
Sbjct: 23 IILVMSQVFGGLAVLLVTIWMSKFESGFAWNED-PDKEFNYHPTFMIMGMVFLFGEALLV 81
Query: 456 YRICRCFRRIYVKLLHAIFHALAFPCIVIGFLAVLDYH--------NKKGINNFYSLHSW 611
YR+ R R+ + K LH I H+ +++ AV DYH N I N SLHSW
Sbjct: 82 YRVFRNERKKFSKTLHVILHSCVLVFMLMALKAVFDYHNLHKDPSGNPAPIVNLVSLHSW 141
Query: 612 IGFVAMGLFGLQYAVGFFSF 671
IG + L+ QY VGF ++
Sbjct: 142 IGLSVVILYFAQYIVGFITY 161
>AF016424-3|AAB65330.1| 251|Caenorhabditis elegans Hypothetical
protein F39G3.5a protein.
Length = 251
Score = 79.4 bits (187), Expect = 2e-15
Identities = 40/113 (35%), Positives = 61/113 (53%)
Frame = +3
Query: 396 LHPTLMVAGFVTFCGFSVLLYRICRCFRRIYVKLLHAIFHALAFPCIVIGFLAVLDYHNK 575
LH LM+ F+ F G ++L YR+ R +I KLLH H +A + ++ N
Sbjct: 66 LHAFLMILAFIYFQGEALLAYRLYRYDAKIISKLLHTALHIIAIGLGITALTVIIMSTNN 125
Query: 576 KGINNFYSLHSWIGFVAMGLFGLQYAVGFFSFLLLLICNKGTAGFRASLVPIH 734
G NNF S+HSWIG + ++ +Q++ GF ++L C +RA L+PIH
Sbjct: 126 AGWNNFTSVHSWIGICLLSVYLVQFSFGFLTYL----CPCSPGKYRARLMPIH 174
>AF016424-4|AAT68893.1| 152|Caenorhabditis elegans Hypothetical
protein F39G3.5b protein.
Length = 152
Score = 62.5 bits (145), Expect = 3e-10
Identities = 30/84 (35%), Positives = 45/84 (53%)
Frame = +3
Query: 396 LHPTLMVAGFVTFCGFSVLLYRICRCFRRIYVKLLHAIFHALAFPCIVIGFLAVLDYHNK 575
LH LM+ F+ F G ++L YR+ R +I KLLH H +A + ++ N
Sbjct: 66 LHAFLMILAFIYFQGEALLAYRLYRYDAKIISKLLHTALHIIAIGLGITALTVIIMSTNN 125
Query: 576 KGINNFYSLHSWIGFVAMGLFGLQ 647
G NNF S+HSWIG + ++ +Q
Sbjct: 126 AGWNNFTSVHSWIGICLLSVYLVQ 149
>AF016424-5|AAB65326.1| 282|Caenorhabditis elegans Hypothetical
protein F39G3.4 protein.
Length = 282
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/113 (24%), Positives = 54/113 (47%)
Frame = +3
Query: 396 LHPTLMVAGFVTFCGFSVLLYRICRCFRRIYVKLLHAIFHALAFPCIVIGFLAVLDYHNK 575
LH LM GF+ G ++L YR+ R L+H H + V +++
Sbjct: 98 LHGFLMFLGFIYLQGEALLSYRVYRFTTNRVSILIHTFLHIASIVLAVGALFSIILTIKY 157
Query: 576 KGINNFYSLHSWIGFVAMGLFGLQYAVGFFSFLLLLICNKGTAGFRASLVPIH 734
G ++F ++HS++G + ++ Q + GF ++L C +++ L+P+H
Sbjct: 158 TGASHFSNIHSYLGVCLLLVYSGQLSFGFCTYLFK--CT--PKDYQSRLMPVH 206
>Z81593-3|CAB04741.1| 332|Caenorhabditis elegans Hypothetical
protein T20B3.3 protein.
Length = 332
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +3
Query: 468 RCFRRIYVKLLHAIFHALAFPCIVIGFLAVLDYHNKKGINN----FYSLHSWIGFVAM 629
R F+R ++ L F + P IGF A+ DYHN + NN S H + +AM
Sbjct: 237 RKFQRAFILQLLIPFLIVFVPLGYIGFTAIFDYHN-QFFNNLTLIIISSHGFFSTIAM 293
>Z81454-2|CAB03804.2| 346|Caenorhabditis elegans Hypothetical
protein B0391.4 protein.
Length = 346
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +3
Query: 501 HAIFHALAFPCIVIGFL----AVLDYHNKKGINNFYSLHSWIGFVAMGLFGLQYAVGFFS 668
+ FH+ + + F+ AV D + N YSL I F FG QY++G +
Sbjct: 101 YTFFHSATMSLLSVHFIYRYWAVFDTNKLAYFNGCYSL---IWFFYCAFFGFQYSLGTYF 157
Query: 669 FL 674
FL
Sbjct: 158 FL 159
>Z81495-11|CAN99657.1| 339|Caenorhabditis elegans Hypothetical
protein Y51H1A.1c protein.
Length = 339
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Frame = -2
Query: 729 SVPRKRGIQ----RCLYCKSTVGGS*RSRLRT 646
++PR++G+ RC C+ T+GGS S+ T
Sbjct: 87 TIPREKGLDAQDFRCAMCRKTIGGSTFSKFET 118
>Z81495-10|CAD57692.1| 480|Caenorhabditis elegans Hypothetical
protein Y51H1A.1b protein.
Length = 480
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Frame = -2
Query: 729 SVPRKRGIQ----RCLYCKSTVGGS*RSRLRT 646
++PR++G+ RC C+ T+GGS S+ T
Sbjct: 228 TIPREKGLDAQDFRCAMCRKTIGGSTFSKFET 259
>Z81495-9|CAB04064.1| 389|Caenorhabditis elegans Hypothetical
protein Y51H1A.1a protein.
Length = 389
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Frame = -2
Query: 729 SVPRKRGIQ----RCLYCKSTVGGS*RSRLRT 646
++PR++G+ RC C+ T+GGS S+ T
Sbjct: 137 TIPREKGLDAQDFRCAMCRKTIGGSTFSKFET 168
>Z68760-12|CAD27623.1| 436|Caenorhabditis elegans Hypothetical
protein F36H1.4b protein.
Length = 436
Score = 28.7 bits (61), Expect = 4.5
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 3/123 (2%)
Frame = -3
Query: 551 QEADNDARER*RVEDGVQQFDIDAPEASTDAVQEHGET---AECNETGHHKSRVQVELLV 381
++ D + E + + Q DA AV++ E A+C + HH + VE++
Sbjct: 112 EKVDEEVEEALKYNEDATQ---DATSTLKPAVRKEIEKLKEAKCKDYCHHNATCHVEVIF 168
Query: 380 RGVVGPGIAPAVIEHPEDGQSGDANEQHRRQSDHEGILAPLAGTSLVVVRVIGPTALVLI 201
R + P+ H G G ++H Q+ AP+ G V + + TA +L+
Sbjct: 169 REDRVSAVVPSC--HCPQGWEGTRCDRHYVQA----FYAPINGRYNVRLSTMSSTAQLLV 222
Query: 200 LSS 192
S
Sbjct: 223 QQS 225
>Z68760-11|CAA92997.2| 438|Caenorhabditis elegans Hypothetical
protein F36H1.4a protein.
Length = 438
Score = 28.7 bits (61), Expect = 4.5
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 3/123 (2%)
Frame = -3
Query: 551 QEADNDARER*RVEDGVQQFDIDAPEASTDAVQEHGET---AECNETGHHKSRVQVELLV 381
++ D + E + + Q DA AV++ E A+C + HH + VE++
Sbjct: 114 EKVDEEVEEALKYNEDATQ---DATSTLKPAVRKEIEKLKEAKCKDYCHHNATCHVEVIF 170
Query: 380 RGVVGPGIAPAVIEHPEDGQSGDANEQHRRQSDHEGILAPLAGTSLVVVRVIGPTALVLI 201
R + P+ H G G ++H Q+ AP+ G V + + TA +L+
Sbjct: 171 REDRVSAVVPSC--HCPQGWEGTRCDRHYVQA----FYAPINGRYNVRLSTMSSTAQLLV 224
Query: 200 LSS 192
S
Sbjct: 225 QQS 227
>X68070-1|CAA48207.1| 438|Caenorhabditis elegans Lin-3 protein.
Length = 438
Score = 28.7 bits (61), Expect = 4.5
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 3/123 (2%)
Frame = -3
Query: 551 QEADNDARER*RVEDGVQQFDIDAPEASTDAVQEHGET---AECNETGHHKSRVQVELLV 381
++ D + E + + Q DA AV++ E A+C + HH + VE++
Sbjct: 114 EKVDEEVEEALKYNEDATQ---DATSTLKPAVRKEIEKLKEAKCKDYCHHNATCHVEVIF 170
Query: 380 RGVVGPGIAPAVIEHPEDGQSGDANEQHRRQSDHEGILAPLAGTSLVVVRVIGPTALVLI 201
R + P+ H G G ++H Q+ AP+ G V + + TA +L+
Sbjct: 171 REDRVSAVVPSC--HCPQGWEGTRCDRHYVQA----FYAPINGRYNVRLSTMSSTAQLLV 224
Query: 200 LSS 192
S
Sbjct: 225 QQS 227
>AL032644-11|CAN99705.1| 339|Caenorhabditis elegans Hypothetical
protein Y51H1A.1c protein.
Length = 339
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Frame = -2
Query: 729 SVPRKRGIQ----RCLYCKSTVGGS*RSRLRT 646
++PR++G+ RC C+ T+GGS S+ T
Sbjct: 87 TIPREKGLDAQDFRCAMCRKTIGGSTFSKFET 118
>AL032644-10|CAD57710.1| 480|Caenorhabditis elegans Hypothetical
protein Y51H1A.1b protein.
Length = 480
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Frame = -2
Query: 729 SVPRKRGIQ----RCLYCKSTVGGS*RSRLRT 646
++PR++G+ RC C+ T+GGS S+ T
Sbjct: 228 TIPREKGLDAQDFRCAMCRKTIGGSTFSKFET 259
>AL032644-9|CAA21673.1| 389|Caenorhabditis elegans Hypothetical
protein Y51H1A.1a protein.
Length = 389
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Frame = -2
Query: 729 SVPRKRGIQ----RCLYCKSTVGGS*RSRLRT 646
++PR++G+ RC C+ T+GGS S+ T
Sbjct: 137 TIPREKGLDAQDFRCAMCRKTIGGSTFSKFET 168
>AL032641-6|CAD27613.1| 436|Caenorhabditis elegans Hypothetical
protein F36H1.4b protein.
Length = 436
Score = 28.7 bits (61), Expect = 4.5
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 3/123 (2%)
Frame = -3
Query: 551 QEADNDARER*RVEDGVQQFDIDAPEASTDAVQEHGET---AECNETGHHKSRVQVELLV 381
++ D + E + + Q DA AV++ E A+C + HH + VE++
Sbjct: 112 EKVDEEVEEALKYNEDATQ---DATSTLKPAVRKEIEKLKEAKCKDYCHHNATCHVEVIF 168
Query: 380 RGVVGPGIAPAVIEHPEDGQSGDANEQHRRQSDHEGILAPLAGTSLVVVRVIGPTALVLI 201
R + P+ H G G ++H Q+ AP+ G V + + TA +L+
Sbjct: 169 REDRVSAVVPSC--HCPQGWEGTRCDRHYVQA----FYAPINGRYNVRLSTMSSTAQLLV 222
Query: 200 LSS 192
S
Sbjct: 223 QQS 225
>AL032641-5|CAA21649.2| 438|Caenorhabditis elegans Hypothetical
protein F36H1.4a protein.
Length = 438
Score = 28.7 bits (61), Expect = 4.5
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 3/123 (2%)
Frame = -3
Query: 551 QEADNDARER*RVEDGVQQFDIDAPEASTDAVQEHGET---AECNETGHHKSRVQVELLV 381
++ D + E + + Q DA AV++ E A+C + HH + VE++
Sbjct: 114 EKVDEEVEEALKYNEDATQ---DATSTLKPAVRKEIEKLKEAKCKDYCHHNATCHVEVIF 170
Query: 380 RGVVGPGIAPAVIEHPEDGQSGDANEQHRRQSDHEGILAPLAGTSLVVVRVIGPTALVLI 201
R + P+ H G G ++H Q+ AP+ G V + + TA +L+
Sbjct: 171 REDRVSAVVPSC--HCPQGWEGTRCDRHYVQA----FYAPINGRYNVRLSTMSSTAQLLV 224
Query: 200 LSS 192
S
Sbjct: 225 QQS 227
>U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family
protein 5, isoformb protein.
Length = 1306
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +3
Query: 276 LVITLATVLLIGVSALTIFWVFY---YRGGYAWADDTPDKQFNL-HPTLM 413
L +T+A +IG+ A+ +FW Y R ++ P K + HPT+M
Sbjct: 1130 LAVTVALGAIIGICAVCVFWSRYKTAQRNASNFSHSYPQKLGPIYHPTMM 1179
>U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family
protein 5, isoforma protein.
Length = 1544
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +3
Query: 276 LVITLATVLLIGVSALTIFWVFY---YRGGYAWADDTPDKQFNL-HPTLM 413
L +T+A +IG+ A+ +FW Y R ++ P K + HPT+M
Sbjct: 1274 LAVTVALGAIIGICAVCVFWSRYKTAQRNASNFSHSYPQKLGPIYHPTMM 1323
>AL117205-7|CAB55160.1| 293|Caenorhabditis elegans Hypothetical
protein Y116A8A.8 protein.
Length = 293
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 348 RGGYAWADDTPDKQFNLHPTLMV 416
+GGY W+D PD+ N+ L++
Sbjct: 241 KGGYTWSDKNPDRLDNVQDCLVL 263
>AF038615-5|AAB94142.1| 934|Caenorhabditis elegans Hypothetical
protein R02D3.1 protein.
Length = 934
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 527 PVHRYRLPGCPRLP 568
PV RY PGCP LP
Sbjct: 337 PVQRYDTPGCPTLP 350
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,549,538
Number of Sequences: 27780
Number of extensions: 340530
Number of successful extensions: 1272
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1269
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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