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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10c21
         (658 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0325 - 2552808-2553895,2553999-2554300,2555014-2555447           30   1.9  
10_08_0746 - 20266701-20266709,20266935-20267063,20267791-20268582     29   2.5  
10_07_0106 - 12933918-12934041,12934164-12934486,12934584-129349...    29   2.5  
03_03_0206 + 15447054-15447181,15448243-15448298,15448373-154485...    29   2.5  
01_01_1215 + 9815918-9816218,9816772-9816912,9816988-9817106,981...    29   2.5  
08_01_0764 - 7332969-7333870,7334044-7334369,7334712-7335384,733...    29   3.3  
11_01_0177 + 1406725-1406920,1407444-1408267                           29   4.3  
10_07_0109 + 12952293-12952952,12953049-12953402,12953494-129538...    29   4.3  
10_07_0105 + 12922828-12923448,12923554-12923907,12924008-129243...    29   4.3  
12_02_0616 - 21246374-21246462,21246605-21247702,21247800-212481...    28   5.7  
10_02_0185 - 6386761-6387122,6387589-6387826,6388215-6389696           28   5.7  
01_01_0376 + 2926426-2927040,2927150-2927239,2927674-2927892           28   7.5  
09_02_0363 - 7871730-7871853,7871986-7872075,7872720-7872799,787...    27   9.9  
07_03_1774 + 29425486-29425831,29426018-29426235,29426337-294271...    27   9.9  
07_01_0314 - 2219664-2221091                                           27   9.9  

>05_01_0325 - 2552808-2553895,2553999-2554300,2555014-2555447
          Length = 607

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = +3

Query: 141 FCKMTSCCTCEGHHSGAKSSLPLVCLVPRD 230
           FCK  SCC C         SL LVC    D
Sbjct: 68  FCKRCSCCICHQFDDNKDPSLWLVCASEND 97


>10_08_0746 - 20266701-20266709,20266935-20267063,20267791-20268582
          Length = 309

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
 Frame = +3

Query: 198 SLPLVCLVPRDGASSEARTKPRPASAGPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRR 377
           SLPL  L PR    S A      + A  +T + +    E +   N     R   L  Y +
Sbjct: 204 SLPLRVLSPRSAKGSLAAASSSASPARRSTSSSYASAAEYWCHGNADTAVRDAIL--YCK 261

Query: 378 PLITF--PMTQEDCKHFNLARKYKINQQILDGYL 473
             IT   P+      H    + + +N Q+ D YL
Sbjct: 262 KSITSEGPLKWMQFSHLGTVQMFSLNYQLSDDYL 295


>10_07_0106 -
           12933918-12934041,12934164-12934486,12934584-12934937,
           12935029-12935646
          Length = 472

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -2

Query: 600 CIHNQEAVICILFLHHHQLRFAFLPSFSYMGKRSAQILILR-DPSNR 463
           C+   EA+I  +   HH L  A  P+ +YM  R  + L LR +  NR
Sbjct: 300 CVSGSEALISRIRAWHHDLGGAISPNAAYMIIRGLKTLALRVEAQNR 346


>03_03_0206 +
           15447054-15447181,15448243-15448298,15448373-15448515,
           15448630-15448827,15448901-15449100,15449585-15449684,
           15449769-15450350,15450434-15450556,15451028-15451108,
           15451188-15451495,15451577-15451816,15452261-15452345,
           15452429-15452606,15453053-15453227,15453826-15453982
          Length = 917

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +2

Query: 449 PTNIGRLLGSRRINICAERFPIYE 520
           PT++GRL    R+N+C+E   IY+
Sbjct: 32  PTDVGRLACVSRLNLCSENDEIYQ 55


>01_01_1215 +
           9815918-9816218,9816772-9816912,9816988-9817106,
           9817922-9818191,9818330-9818369,9818519-9818616,
           9818745-9818825
          Length = 349

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 228 DGASSEARTKPRPASAGPTTQND 296
           +GASSE  T+PRP  A P T  +
Sbjct: 43  EGASSEPETRPRPPPATPATAEE 65


>08_01_0764 -
           7332969-7333870,7334044-7334369,7334712-7335384,
           7336195-7336219
          Length = 641

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 141 FCKMTSCCTCEGHHSGAKSSLPLVC 215
           +CK  SCC C  +      SL LVC
Sbjct: 155 YCKRCSCCICHKYDENKDPSLWLVC 179


>11_01_0177 + 1406725-1406920,1407444-1408267
          Length = 339

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
 Frame = +3

Query: 174 GHHSGAKSSLPLVCLV-PRDGASSEARTK---PRPASAGPTTQNDFQLLDEEYIRKNFKL 341
           G  +G  S   L+ +  P+ G  ++AR           G T  +DFQL+D   I   F L
Sbjct: 144 GQDNGVDSDNSLIPMPGPKRGIGNQARVLIEFDMKIKNGETRDDDFQLIDGAIICSEFVL 203

Query: 342 PQR 350
           P R
Sbjct: 204 PNR 206


>10_07_0109 +
           12952293-12952952,12953049-12953402,12953494-12953816,
           12953939-12954062
          Length = 486

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -2

Query: 600 CIHNQEAVICILFLHHHQLRFAFLPSFSYMGKRSAQILILR-DPSNR 463
           C+   EA+I  +   HH L  A  P+ +YM  R  + + LR +  NR
Sbjct: 314 CVSGSEALISRIRAWHHDLGGAISPNAAYMIIRGLKTIALRVEAQNR 360


>10_07_0105 +
           12922828-12923448,12923554-12923907,12924008-12924330,
           12928324-12928401,12928760-12928883
          Length = 499

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -2

Query: 600 CIHNQEAVICILFLHHHQLRFAFLPSFSYMGKRSAQILILR 478
           C+   EA++  +   HH L  A  P+ +YM  R  + L LR
Sbjct: 301 CVSGSEALVSRIRTWHHDLGGAISPNAAYMIIRGLKTLALR 341


>12_02_0616 -
           21246374-21246462,21246605-21247702,21247800-21248110,
           21248550-21249251,21252802-21252912,21253396-21253481,
           21253753-21253862,21254085-21254236,21254656-21254765
          Length = 922

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = +3

Query: 141 FCKMTSCCTCEGHHSGAKSSLPLVC 215
           FCK  SCC C         SL LVC
Sbjct: 347 FCKRCSCCICHLFDDNKDPSLWLVC 371


>10_02_0185 - 6386761-6387122,6387589-6387826,6388215-6389696
          Length = 693

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +3

Query: 465 GYLDPGESISAPSVFPYMKTKAEKQSEADDDEEIIYILQ 581
           G LDP  +I A ++F Y +   + +SE D   E++YI Q
Sbjct: 72  GLLDPVSNIVANTLFSYGRAVGDTRSECD---ELVYIPQ 107


>01_01_0376 + 2926426-2927040,2927150-2927239,2927674-2927892
          Length = 307

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -1

Query: 445 ILYFLAKLKCLQSSCVIGKVIRGRLYGSKYNAL 347
           ++ FLA L CL  S +I  + + R+ GS  N L
Sbjct: 28  VVEFLASLLCLPMSTIINLLTKERMVGSMGNVL 60


>09_02_0363 -
           7871730-7871853,7871986-7872075,7872720-7872799,
           7872881-7872964,7874944-7874992,7875114-7875240,
           7875798-7875934,7876004-7876050,7876126-7876185,
           7876810-7876862,7878205-7878269,7879050-7879174,
           7879307-7879366,7879670-7879806,7880737-7880805,
           7880889-7881045,7881121-7881235,7881855-7881916
          Length = 546

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +1

Query: 298 SSCSTRSTSGKTLSCHRGRCIWTRIDVPL 384
           ++CS     G TL    G+C W +I + L
Sbjct: 121 NNCSGNHVEGSTLQKLEGKCFWGKIPIDL 149


>07_03_1774 +
           29425486-29425831,29426018-29426235,29426337-29427131,
           29427206-29428074,29428317-29428749,29429263-29429859
          Length = 1085

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 100 LFCLCFYHFFVCFNLFKFCTKN 35
           LF LCF+ F + FN     TKN
Sbjct: 97  LFVLCFFLFQIAFNCLLITTKN 118


>07_01_0314 - 2219664-2221091
          Length = 475

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +3

Query: 252 TKPRPASAGPTTQNDFQLLDEEYIRKN--FKLPQRALYL 362
           ++PRP    P T  D  LL  +YI+K   F+ P   L+L
Sbjct: 25  SRPRPRERIPLTTWDVSLLAADYIQKGLLFRPPPATLHL 63


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,859,617
Number of Sequences: 37544
Number of extensions: 385855
Number of successful extensions: 1051
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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